RNA–Protein interactions for RNA: ENST00000339413.10

YIF1B-203, Transcript of Yip1 interacting factor homolog B, membrane trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YIF1B, Length 1,225 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1B-203ENST00000339413 NISCHQ9Y2I1 1504 aa41.64■■■■■ 4.26
YIF1B-203ENST00000339413 CCDC180Q9P1Z9 1646 aa36.99■■■■□ 3.51
YIF1B-203ENST00000339413 ABCC9O60706 1549 aa36.21■■■■□ 3.39
YIF1B-203ENST00000339413 RB1CC1Q8TDY2 1594 aa34.81■■■■□ 3.16
YIF1B-203ENST00000339413 NACADO15069 1562 aa34.79■■■■□ 3.16
YIF1B-203ENST00000339413 DCAF8L2P0C7V8 631 aa34.77■■■■□ 3.16
YIF1B-203ENST00000339413 ZCCHC6Q5VYS8 1495 aaKnown RBP34.67■■■■□ 3.14
YIF1B-203ENST00000339413 MYO15BQ96JP2 1530 aa34.6■■■■□ 3.13
YIF1B-203ENST00000339413 DCAF1Q9Y4B6 1507 aa34.45■■■■□ 3.11
YIF1B-203ENST00000339413 UNC13AQ9UPW8 1703 aa34.07■■■■□ 3.04
YIF1B-203ENST00000339413 PABPN1Q86U42 306 aaKnown RBP eCLIP33.87■■■■□ 3.01
YIF1B-203ENST00000339413 BICRAQ9NZM4 1560 aa33.82■■■■□ 3
YIF1B-203ENST00000339413 SCRIBQ14160 1630 aa33.73■■■□□ 2.99
YIF1B-203ENST00000339413 SHROOM4Q9ULL8 1493 aa33.4■■■□□ 2.94
YIF1B-203ENST00000339413 DNAJC5BQ9UF47 199 aa33.35■■■□□ 2.93
YIF1B-203ENST00000339413 EIF4G1Q04637 1599 aaKnown RBP32.89■■■□□ 2.86
YIF1B-203ENST00000339413 CC2D2AQ9P2K1 1620 aa32.77■■■□□ 2.84
YIF1B-203ENST00000339413 CECR2Q9BXF3 1484 aa32.54■■■□□ 2.8
YIF1B-203ENST00000339413 SMARCA4P51532 1647 aa32.29■■■□□ 2.76
YIF1B-203ENST00000339413 BAZ1AQ9NRL2 1556 aaPredicted RBP32.24■■■□□ 2.75
YIF1B-203ENST00000339413 ATAD2BQ9ULI0 1458 aa32.15■■■□□ 2.74
YIF1B-203ENST00000339413 NCAPD3P42695 1498 aa32.14■■■□□ 2.74
YIF1B-203ENST00000339413 MROH2BQ7Z745 1585 aa32.1■■■□□ 2.73
YIF1B-203ENST00000339413 SMARCA2P51531 1590 aa32.07■■■□□ 2.72
YIF1B-203ENST00000339413 PEG3Q9GZU2 1588 aa32■■■□□ 2.71
YIF1B-203ENST00000339413 HMGXB3Q12766 1538 aa31.93■■■□□ 2.7
YIF1B-203ENST00000339413 BAZ1BQ9UIG0 1483 aaKnown RBP31.83■■■□□ 2.69
YIF1B-203ENST00000339413 WIZO95785 1651 aa31.74■■■□□ 2.67
YIF1B-203ENST00000339413 RSF1Q96T23 1441 aaPredicted RBP31.74■■■□□ 2.67
YIF1B-203ENST00000339413 TOP2AP11388 1531 aaKnown RBP31.39■■■□□ 2.61
YIF1B-203ENST00000339413 NESP48681 1621 aa31.35■■■□□ 2.61
YIF1B-203ENST00000339413 LAMC3Q9Y6N6 1575 aa31.25■■■□□ 2.59
YIF1B-203ENST00000339413 CADPSQ9ULU8 1353 aa31.19■■■□□ 2.58
YIF1B-203ENST00000339413 ERCC6Q03468 1493 aa31.16■■■□□ 2.58
YIF1B-203ENST00000339413 CCDC88BA6NC98 1476 aa31.06■■■□□ 2.56
YIF1B-203ENST00000339413 PDS5BQ9NTI5 1447 aa31.04■■■□□ 2.56
YIF1B-203ENST00000339413 CFTRP13569 1480 aa31.01■■■□□ 2.55
YIF1B-203ENST00000339413 KIF21AQ7Z4S6 1674 aa30.96■■■□□ 2.55
YIF1B-203ENST00000339413 SUPT5HO00267 1087 aaKnown RBP30.9■■■□□ 2.54
YIF1B-203ENST00000339413 CUX2O14529 1486 aa30.88■■■□□ 2.53
YIF1B-203ENST00000339413 THOC2Q8NI27 1593 aaKnown RBP30.86■■■□□ 2.53
YIF1B-203ENST00000339413 FANCD2Q9BXW9 1451 aa30.81■■■□□ 2.52
YIF1B-203ENST00000339413 CEP164Q9UPV0 1460 aa30.75■■■□□ 2.51
YIF1B-203ENST00000339413 PRDM2Q13029 1718 aa30.73■■■□□ 2.51
YIF1B-203ENST00000339413 MRC2Q9UBG0 1479 aa30.71■■■□□ 2.51
YIF1B-203ENST00000339413 WDR62O43379 1518 aa30.63■■■□□ 2.49
YIF1B-203ENST00000339413 URB2Q14146 1524 aaKnown RBP30.52■■■□□ 2.48
YIF1B-203ENST00000339413 TOPBP1Q92547 1522 aa30.32■■■□□ 2.44
YIF1B-203ENST00000339413 ABCC8Q09428 1581 aa30.31■■■□□ 2.44
YIF1B-203ENST00000339413 DNMBPQ6XZF7 1577 aa30.27■■■□□ 2.44
YIF1B-203ENST00000339413 IFT140Q96RY7 1462 aa30.12■■■□□ 2.41
YIF1B-203ENST00000339413 CUX1P39880 1505 aa30.1■■■□□ 2.41
YIF1B-203ENST00000339413 POLA1P09884 1462 aaPredicted RBP30.06■■■□□ 2.4
YIF1B-203ENST00000339413 DNAJC5Q9H3Z4 198 aa30.01■■■□□ 2.39
YIF1B-203ENST00000339413 ZNF608Q9ULD9 1512 aaPredicted RBP30.01■■■□□ 2.39
YIF1B-203ENST00000339413 TARBP1Q13395 1621 aaKnown RBP30■■■□□ 2.39
YIF1B-203ENST00000339413 FGD5Q6ZNL6 1462 aa29.99■■■□□ 2.39
YIF1B-203ENST00000339413 SOGA1O94964 1423 aa29.96■■■□□ 2.39
YIF1B-203ENST00000339413 RAD54L2Q9Y4B4 1467 aa29.95■■■□□ 2.39
YIF1B-203ENST00000339413 WRNQ14191 1432 aaPredicted RBP eCLIP29.88■■■□□ 2.37
YIF1B-203ENST00000339413 AQRO60306 1485 aaKnown RBP eCLIP29.85■■■□□ 2.374e-7■■■■□ 19.6
YIF1B-203ENST00000339413 EIF4G3O43432 1585 aaKnown RBP29.85■■■□□ 2.37
YIF1B-203ENST00000339413 TOP2BQ02880 1626 aa29.82■■■□□ 2.36
YIF1B-203ENST00000339413 BIVM-ERCC5R4GMW8 1640 aa29.82■■■□□ 2.36
YIF1B-203ENST00000339413 SYNJ1O43426 1573 aa29.82■■■□□ 2.36
YIF1B-203ENST00000339413 TDRD9Q8NDG6 1382 aaKnown RBP29.79■■■□□ 2.36
YIF1B-203ENST00000339413 WDR97A6NE52 1622 aa29.74■■■□□ 2.35
YIF1B-203ENST00000339413 ABCA10Q8WWZ4 1543 aa29.71■■■□□ 2.35
YIF1B-203ENST00000339413 OSCARQ8IYS5 282 aa29.63■■■□□ 2.33
YIF1B-203ENST00000339413 GAPVD1Q14C86 1478 aa29.59■■■□□ 2.33
YIF1B-203ENST00000339413 GRIN2BQ13224 1484 aa29.58■■■□□ 2.33
YIF1B-203ENST00000339413 ABCA5Q8WWZ7 1642 aa29.58■■■□□ 2.33
YIF1B-203ENST00000339413 SNAPC4Q5SXM2 1469 aa29.54■■■□□ 2.32
YIF1B-203ENST00000339413 PBRM1Q86U86 1689 aa29.5■■■□□ 2.31
YIF1B-203ENST00000339413 MAGI1Q96QZ7 1491 aaPredicted RBP29.49■■■□□ 2.31
YIF1B-203ENST00000339413 CHD1O14646 1710 aa29.48■■■□□ 2.31
YIF1B-203ENST00000339413 FBLN2P98095 1184 aa29.46■■■□□ 2.31
YIF1B-203ENST00000339413 CHMP7Q8WUX9 453 aaPredicted RBP29.39■■■□□ 2.3
YIF1B-203ENST00000339413 SYNJ2O15056 1496 aa29.39■■■□□ 2.3
YIF1B-203ENST00000339413 ERICH3Q5RHP9 1530 aa29.34■■■□□ 2.29
YIF1B-203ENST00000339413 ADAMTS12P58397 1594 aa29.27■■■□□ 2.28
YIF1B-203ENST00000339413 KIF27Q86VH2 1401 aa29.26■■■□□ 2.27
YIF1B-203ENST00000339413 FHAD1B1AJZ9 1412 aa29.25■■■□□ 2.27
YIF1B-203ENST00000339413 IGF1RP08069 1367 aa29.21■■■□□ 2.27
YIF1B-203ENST00000339413 GRIN2AQ12879 1464 aa29.2■■■□□ 2.26
YIF1B-203ENST00000339413 CLASP1Q7Z460 1538 aa29.19■■■□□ 2.26
YIF1B-203ENST00000339413 TRIM41Q8WV44 630 aa29.18■■■□□ 2.26
YIF1B-203ENST00000339413 RIMBP3CA6NJZ7 1639 aa29.13■■■□□ 2.25
YIF1B-203ENST00000339413 RIMBP3BA6NNM3 1639 aa29.13■■■□□ 2.25
YIF1B-203ENST00000339413 RIMBP3Q9UFD9 1639 aa29.13■■■□□ 2.25
YIF1B-203ENST00000339413 ARHGEF11O15085 1522 aa29.12■■■□□ 2.25
YIF1B-203ENST00000339413 NUP160Q12769 1436 aa29.1■■■□□ 2.25
YIF1B-203ENST00000339413 CEP170Q5SW79 1584 aa29.07■■■□□ 2.24
YIF1B-203ENST00000339413 RUSC2Q8N2Y8 1516 aa29.05■■■□□ 2.24
YIF1B-203ENST00000339413 CUL7Q14999 1698 aa29.04■■■□□ 2.24
YIF1B-203ENST00000339413 CARMIL1Q5VZK9 1371 aa29■■■□□ 2.23
YIF1B-203ENST00000339413 ARAP1Q96P48 1450 aa28.9■■■□□ 2.22
YIF1B-203ENST00000339413 CHIC1Q5VXU3 224 aa28.88■■■□□ 2.21
YIF1B-203ENST00000339413 CYB5RLQ6IPT4 315 aa28.88■■■□□ 2.21
YIF1B-203ENST00000339413 SHROOM2Q13796 1616 aa28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms