Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 XRCC4-206ENST00000542685 1243 ntTSL 1 (best)6.1□□□□□ -1.431e-6■■■■□ 25.1
MATR3P43243 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.431e-6■■■■□ 25.1
MATR3P43243 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.451e-6■■■■□ 25.1
MATR3P43243 ATP13A3-202ENST00000429136 3729 ntTSL 1 (best)5.96□□□□□ -1.461e-6■■■■□ 25.1
MATR3P43243 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.61□□□□□ -1.511e-6■■■■□ 25.1
MATR3P43243 ATP13A3-210ENST00000497567 532 ntTSL 45.32□□□□□ -1.561e-6■■■■□ 25.1
MATR3P43243 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.621e-6■■■■□ 25.1
MATR3P43243 JMJD1C-207ENST00000489372 913 ntTSL 54.76□□□□□ -1.658e-7■■■■□ 25.1
MATR3P43243 CMC1-207ENST00000468330 551 ntTSL 44.65□□□□□ -1.677e-8■■■■□ 25.1
MATR3P43243 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.696e-8■■■■□ 25.1
MATR3P43243 CDK17-205ENST00000548734 556 ntTSL 44.46□□□□□ -1.71e-6■■■■□ 25.1
MATR3P43243 SPCS2-203ENST00000526883 498 ntTSL 24.27□□□□□ -1.731e-6■■■■□ 25.1
MATR3P43243 JMJD1C-205ENST00000469152 734 ntTSL 34.04□□□□□ -1.768e-7■■■■□ 25.1
MATR3P43243 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.781e-6■■■■□ 25.1
MATR3P43243 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.88e-7■■■■□ 25.1
MATR3P43243 JMJD1C-203ENST00000402544 8011 ntTSL 1 (best)3.17□□□□□ -1.98e-7■■■■□ 25.1
MATR3P43243 CDK17-209ENST00000551816 626 ntTSL 42.92□□□□□ -1.941e-6■■■■□ 25.1
MATR3P43243 CMC1-206ENST00000467644 549 ntTSL 32.7□□□□□ -1.987e-8■■■■□ 25.1
MATR3P43243 CMC1-211ENST00000495428 608 ntTSL 32.69□□□□□ -1.987e-8■■■■□ 25.1
MATR3P43243 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.051e-6■■■■□ 25.1
MATR3P43243 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.16□□□□□ -2.061e-6■■■■□ 25.1
MATR3P43243 XRCC4-204ENST00000509268 1567 ntTSL 21.91□□□□□ -2.11e-6■■■■□ 25.1
MATR3P43243 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.76□□□□□ -2.131e-6■■■■□ 25.1
MATR3P43243 TJP1-206ENST00000473741 270 ntTSL 21.5□□□□□ -2.171e-6■■■■□ 25.1
MATR3P43243 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC14□□□□□ -0.172e-6■■■■□ 25.1
MATR3P43243 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.782e-6■■■■□ 25.1
MATR3P43243 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC7.76□□□□□ -1.172e-6■■■■□ 25.1
MATR3P43243 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.76□□□□□ -1.332e-6■■■■□ 25.1
MATR3P43243 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.36□□□□□ -1.551e-6■■■■□ 25.1
MATR3P43243 FARS2-204ENST00000602691 562 ntTSL 318.34■□□□□ 0.534e-7■■■■□ 25.1
MATR3P43243 SERGEF-217ENST00000531926 425 ntTSL 311.48□□□□□ -0.574e-7■■■■□ 25.1
MATR3P43243 PTPN4-201ENST00000263708 10300 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.225e-7■■■■□ 25.1
MATR3P43243 PTPN4-203ENST00000430976 4154 ntTSL 56.29□□□□□ -1.45e-7■■■■□ 25.1
MATR3P43243 PTPN4-205ENST00000433888 954 ntTSL 32.62□□□□□ -1.995e-7■■■■□ 25.1
MATR3P43243 PCCA-212ENST00000636420 1418 ntTSL 58.54□□□□□ -1.045e-7■■■■□ 25
MATR3P43243 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.741e-6■■■■□ 25
MATR3P43243 FAM120C-204ENST00000497680 637 ntTSL 220.45■□□□□ 0.861e-6■■■■□ 25
MATR3P43243 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.181e-6■■■■□ 25
MATR3P43243 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.061e-6■■■■□ 25
MATR3P43243 GPBP1-208ENST00000514387 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.872e-17■■■■□ 25
MATR3P43243 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.92e-17■■■■□ 25
MATR3P43243 GPBP1-206ENST00000513524 529 ntTSL 55.39□□□□□ -1.552e-17■■■■□ 25
MATR3P43243 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.672e-17■■■■□ 25
MATR3P43243 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.692e-17■■■■□ 25
MATR3P43243 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.932e-17■■■■□ 25
MATR3P43243 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.428e-7■■■■□ 25
MATR3P43243 FRAS1-201ENST00000325942 7142 ntTSL 1 (best) BASIC11.81□□□□□ -0.526e-7■■■■□ 25
MATR3P43243 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.366e-7■■■■□ 25
MATR3P43243 EZH2-210ENST00000498186 1876 ntTSL 226.55■■□□□ 1.842e-7■■■■□ 25
MATR3P43243 EZH2-207ENST00000483012 1491 ntTSL 226.44■■□□□ 1.822e-7■■■■□ 25
MATR3P43243 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC26.11■■□□□ 1.772e-7■■■■□ 25
MATR3P43243 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC25.48■■□□□ 1.672e-7■■■■□ 25
MATR3P43243 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.162e-7■■■■□ 25
MATR3P43243 EZH2-209ENST00000492143 3641 ntTSL 218.83■□□□□ 0.612e-7■■■■□ 25
MATR3P43243 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.082e-7■■■■□ 25
MATR3P43243 EZH2-205ENST00000476773 2572 ntTSL 2 BASIC10.21□□□□□ -0.772e-7■■■■□ 25
MATR3P43243 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC8.3□□□□□ -1.082e-7■■■■□ 25
MATR3P43243 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.44■□□□□ 0.73e-6■■■■□ 25
MATR3P43243 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.33e-6■■■■□ 25
MATR3P43243 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.33e-6■■■■□ 25
MATR3P43243 RSBN1-206ENST00000616024 2703 ntTSL 1 (best) BASIC13.31□□□□□ -0.283e-6■■■■□ 25
MATR3P43243 RSBN1-203ENST00000476412 3772 ntTSL 211.79□□□□□ -0.523e-6■■■■□ 25
MATR3P43243 MIPOL1-209ENST00000554930 1377 ntTSL 514.03□□□□□ -0.164e-6■■■■□ 25
MATR3P43243 MIPOL1-210ENST00000555870 7434 ntTSL 1 (best)7.05□□□□□ -1.284e-6■■■■□ 25
MATR3P43243 MIPOL1-207ENST00000553349 700 ntTSL 32.96□□□□□ -1.944e-6■■■■□ 25
MATR3P43243 MIPOL1-214ENST00000556940 485 ntTSL 31.88□□□□□ -2.114e-6■■■■□ 25
MATR3P43243 AFDN-210ENST00000423229 1807 ntTSL 1 (best)8.59□□□□□ -1.032e-6■■■■□ 25
MATR3P43243 IGF2BP2-205ENST00000461957 509 ntTSL 515.23■□□□□ 0.037e-7■■■■□ 25
MATR3P43243 IGF2BP2-208ENST00000466476 469 ntTSL 213.42□□□□□ -0.267e-7■■■■□ 25
MATR3P43243 IGF2BP2-209ENST00000493302 358 ntTSL 57.81□□□□□ -1.167e-7■■■■□ 25
MATR3P43243 DIS3L2-210ENST00000433430 4671 ntTSL 514.6□□□□□ -0.072e-6■■■■□ 25
MATR3P43243 DIS3L2-208ENST00000424049 1149 ntTSL 513.12□□□□□ -0.312e-6■■■■□ 25
MATR3P43243 DIS3L2-201ENST00000273009 3201 ntTSL 2 BASIC12.58□□□□□ -0.42e-6■■■■□ 25
MATR3P43243 DIS3L2-213ENST00000445090 3250 ntTSL 1 (best)12.49□□□□□ -0.412e-6■■■■□ 25
MATR3P43243 DIS3L2-204ENST00000409307 2658 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.472e-6■■■■□ 25
MATR3P43243 DIS3L2-203ENST00000390005 3328 ntTSL 1 (best)10.64□□□□□ -0.712e-6■■■■□ 25
MATR3P43243 DIS3L2-202ENST00000325385 3501 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.972e-6■■■■□ 25
MATR3P43243 PHF20-216ENST00000617560 618 ntTSL 214.31□□□□□ -0.126e-7■■■■□ 24.9
MATR3P43243 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.623e-7■■■■□ 24.9
MATR3P43243 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.543e-7■■■■□ 24.9
MATR3P43243 SH3BP4-205ENST00000444916 570 ntTSL 415.45■□□□□ 0.063e-7■■■■□ 24.9
MATR3P43243 SH3BP4-206ENST00000446904 829 ntTSL 311.26□□□□□ -0.613e-7■■■■□ 24.9
MATR3P43243 SH3BP4-207ENST00000454947 500 ntTSL 410.19□□□□□ -0.783e-7■■■■□ 24.9
MATR3P43243 PRH1-203ENST00000538332 675 ntAPPRIS ALT2 TSL 54.53□□□□□ -1.681e-6■■■■□ 24.9
MATR3P43243 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.07□□□□□ -1.446e-7■■■■□ 24.9
MATR3P43243 RFC3-203ENST00000616236 612 ntTSL 35.16□□□□□ -1.586e-7■■■■□ 24.9
MATR3P43243 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.63■□□□□ 0.092e-6■■■■□ 24.9
MATR3P43243 ATL2-203ENST00000405384 1905 ntTSL 1 (best)14.77□□□□□ -0.042e-6■■■■□ 24.9
MATR3P43243 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.082e-6■■■■□ 24.9
MATR3P43243 ATL2-206ENST00000419554 2335 ntTSL 2 BASIC13.61□□□□□ -0.232e-6■■■■□ 24.9
MATR3P43243 ATL2-204ENST00000406122 2864 ntTSL 5 BASIC13.57□□□□□ -0.242e-6■■■■□ 24.9
MATR3P43243 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.46□□□□□ -1.862e-6■■■■□ 24.9
MATR3P43243 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.663e-7■■■■□ 24.9
MATR3P43243 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.354e-6■■■■□ 24.9
MATR3P43243 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.314e-6■■■■□ 24.9
MATR3P43243 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.254e-6■■■■□ 24.9
MATR3P43243 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC16.35■□□□□ 0.214e-6■■■■□ 24.9
MATR3P43243 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.094e-6■■■■□ 24.9
MATR3P43243 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.074e-6■■■■□ 24.9
MATR3P43243 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.62□□□□□ -1.194e-7■■■■□ 24.9
Retrieved 100 of 16,209 protein–RNA pairs in 115.4 ms