RNA–Protein interactions for RNA: ENST00000429136.5

ATP13A3-202, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-202ENST00000429136 NISCHQ9Y2I1 1504 aa10.9□□□□□ -0.66
ATP13A3-202ENST00000429136 DCAF8L2P0C7V8 631 aa9.42□□□□□ -0.9
ATP13A3-202ENST00000429136 SHROOM4Q9ULL8 1493 aa9.39□□□□□ -0.91
ATP13A3-202ENST00000429136 SUPT5HO00267 1087 aaKnown RBP9.28□□□□□ -0.92
ATP13A3-202ENST00000429136 CCDC180Q9P1Z9 1646 aa9.25□□□□□ -0.93
ATP13A3-202ENST00000429136 ZCCHC6Q5VYS8 1495 aaKnown RBP9.17□□□□□ -0.94
ATP13A3-202ENST00000429136 DCAF1Q9Y4B6 1507 aa8.93□□□□□ -0.98
ATP13A3-202ENST00000429136 CHIC1Q5VXU3 224 aa8.85□□□□□ -0.99
ATP13A3-202ENST00000429136 ABCC9O60706 1549 aa8.79□□□□□ -1
ATP13A3-202ENST00000429136 SCRIBQ14160 1630 aa8.72□□□□□ -1.01
ATP13A3-202ENST00000429136 MYO15BQ96JP2 1530 aa8.71□□□□□ -1.01
ATP13A3-202ENST00000429136 TRIM41Q8WV44 630 aa8.69□□□□□ -1.02
ATP13A3-202ENST00000429136 NACADO15069 1562 aa8.68□□□□□ -1.02
ATP13A3-202ENST00000429136 RSF1Q96T23 1441 aaPredicted RBP8.61□□□□□ -1.03
ATP13A3-202ENST00000429136 PCGF6Q9BYE7 350 aa8.61□□□□□ -1.03
ATP13A3-202ENST00000429136 FAM9AQ8IZU1 332 aaPredicted RBP8.59□□□□□ -1.03
ATP13A3-202ENST00000429136 RB1CC1Q8TDY2 1594 aa8.58□□□□□ -1.04
ATP13A3-202ENST00000429136 LOC105371045A0A1W2PR82 267 aa8.57□□□□□ -1.04
ATP13A3-202ENST00000429136 EHMT2Q96KQ7 1210 aa8.52□□□□□ -1.05
ATP13A3-202ENST00000429136 HRCP23327 699 aa8.51□□□□□ -1.05
ATP13A3-202ENST00000429136 TRIM26Q12899 539 aaPredicted RBP8.49□□□□□ -1.05
ATP13A3-202ENST00000429136 CECR2Q9BXF3 1484 aa8.46□□□□□ -1.05
ATP13A3-202ENST00000429136 BAZ1AQ9NRL2 1556 aaPredicted RBP8.45□□□□□ -1.06
ATP13A3-202ENST00000429136 PABPN1Q86U42 306 aaKnown RBP eCLIP8.44□□□□□ -1.06
ATP13A3-202ENST00000429136 MROH2BQ7Z745 1585 aa8.43□□□□□ -1.06
ATP13A3-202ENST00000429136 ZEB1P37275 1124 aaPredicted RBP8.42□□□□□ -1.06
ATP13A3-202ENST00000429136 UBTFP17480 764 aaKnown RBP8.35□□□□□ -1.07
ATP13A3-202ENST00000429136 WIZO95785 1651 aa8.33□□□□□ -1.08
ATP13A3-202ENST00000429136 APLP2Q06481 763 aa8.31□□□□□ -1.08
ATP13A3-202ENST00000429136 TOP2AP11388 1531 aaKnown RBP8.3□□□□□ -1.08
ATP13A3-202ENST00000429136 SMARCA4P51532 1647 aa8.29□□□□□ -1.08
ATP13A3-202ENST00000429136 CSRNP3Q8WYN3 585 aa8.27□□□□□ -1.09
ATP13A3-202ENST00000429136 CCDC88BA6NC98 1476 aa8.26□□□□□ -1.09
ATP13A3-202ENST00000429136 EEA1Q15075 1411 aa8.26□□□□□ -1.09
ATP13A3-202ENST00000429136 PPARGC1BQ86YN6 1023 aaKnown RBP8.26□□□□□ -1.09
ATP13A3-202ENST00000429136 TTBK1Q5TCY1 1321 aaPredicted RBP8.25□□□□□ -1.09
ATP13A3-202ENST00000429136 CCER1Q8TC90 406 aaPredicted RBP8.25□□□□□ -1.09
ATP13A3-202ENST00000429136 BAZ1BQ9UIG0 1483 aaKnown RBP8.22□□□□□ -1.09
ATP13A3-202ENST00000429136 WRNQ14191 1432 aaPredicted RBP eCLIP8.2□□□□□ -1.1
ATP13A3-202ENST00000429136 SMARCA2P51531 1590 aa8.19□□□□□ -1.1
ATP13A3-202ENST00000429136 RANGAP1P46060 587 aaPredicted RBP8.17□□□□□ -1.1
ATP13A3-202ENST00000429136 ABCC8Q09428 1581 aa8.17□□□□□ -1.1
ATP13A3-202ENST00000429136 TNIKQ9UKE5 1360 aa8.16□□□□□ -1.1
ATP13A3-202ENST00000429136 GOLGA3Q08378 1498 aa8.15□□□□□ -1.1
ATP13A3-202ENST00000429136 ATAD2BQ9ULI0 1458 aa8.15□□□□□ -1.1
ATP13A3-202ENST00000429136 CEP162Q5TB80 1403 aa8.15□□□□□ -1.11
ATP13A3-202ENST00000429136 SOGA1O94964 1423 aa8.13□□□□□ -1.11
ATP13A3-202ENST00000429136 BICRAQ9NZM4 1560 aa8.12□□□□□ -1.11
ATP13A3-202ENST00000429136 CEP164Q9UPV0 1460 aa8.12□□□□□ -1.11
ATP13A3-202ENST00000429136 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.11□□□□□ -1.11
ATP13A3-202ENST00000429136 UNC13AQ9UPW8 1703 aa8.11□□□□□ -1.11
ATP13A3-202ENST00000429136 CLIP1P30622 1438 aa8.08□□□□□ -1.12
ATP13A3-202ENST00000429136 PEG3Q9GZU2 1588 aa8.07□□□□□ -1.12
ATP13A3-202ENST00000429136 EIF4G1Q04637 1599 aaKnown RBP8.06□□□□□ -1.12
ATP13A3-202ENST00000429136 HNRNPUL2Q1KMD3 747 aaKnown RBP8.06□□□□□ -1.12
ATP13A3-202ENST00000429136 KIF27Q86VH2 1401 aa8.02□□□□□ -1.13
ATP13A3-202ENST00000429136 RUSC2Q8N2Y8 1516 aa8.02□□□□□ -1.13
ATP13A3-202ENST00000429136 NCAPD3P42695 1498 aa8.02□□□□□ -1.13
ATP13A3-202ENST00000429136 CENPBP07199 599 aaPredicted RBP8□□□□□ -1.13
ATP13A3-202ENST00000429136 ATP1B4Q9UN42 357 aaPredicted RBP7.99□□□□□ -1.13
ATP13A3-202ENST00000429136 HMGXB3Q12766 1538 aa7.98□□□□□ -1.13
ATP13A3-202ENST00000429136 VPS8Q8N3P4 1428 aa7.98□□□□□ -1.13
ATP13A3-202ENST00000429136 SYNJ1O43426 1573 aa7.97□□□□□ -1.13
ATP13A3-202ENST00000429136 KIF21BO75037 1637 aa7.96□□□□□ -1.14
ATP13A3-202ENST00000429136 DIEXFQ68CQ4 756 aaKnown RBP7.95□□□□□ -1.14
ATP13A3-202ENST00000429136 RAPGEF2Q9Y4G8 1499 aa7.95□□□□□ -1.14
ATP13A3-202ENST00000429136 CADPSQ9ULU8 1353 aa7.93□□□□□ -1.14
ATP13A3-202ENST00000429136 TOP2BQ02880 1626 aa7.93□□□□□ -1.14
ATP13A3-202ENST00000429136 ITGAEP38570 1179 aa7.92□□□□□ -1.14
ATP13A3-202ENST00000429136 CFTRP13569 1480 aa7.92□□□□□ -1.14
ATP13A3-202ENST00000429136 ZNF316A6NFI3 1004 aaPredicted RBP7.92□□□□□ -1.14
ATP13A3-202ENST00000429136 CUX2O14529 1486 aa7.91□□□□□ -1.14
ATP13A3-202ENST00000429136 ERICH3Q5RHP9 1530 aa7.89□□□□□ -1.15
ATP13A3-202ENST00000429136 CARMIL1Q5VZK9 1371 aa7.88□□□□□ -1.15
ATP13A3-202ENST00000429136 PRXQ9BXM0 1461 aa7.86□□□□□ -1.15
ATP13A3-202ENST00000429136 FAM50AQ14320 339 aaKnown RBP7.86□□□□□ -1.15
ATP13A3-202ENST00000429136 CUX1P39880 1505 aa7.86□□□□□ -1.15
ATP13A3-202ENST00000429136 P3H3Q8IVL6 736 aa7.86□□□□□ -1.15
ATP13A3-202ENST00000429136 BIVM-ERCC5R4GMW8 1640 aa7.85□□□□□ -1.15
ATP13A3-202ENST00000429136 CLSPNQ9HAW4 1339 aa7.84□□□□□ -1.15
ATP13A3-202ENST00000429136 FHAD1B1AJZ9 1412 aa7.84□□□□□ -1.15
ATP13A3-202ENST00000429136 FANCD2Q9BXW9 1451 aa7.83□□□□□ -1.16
ATP13A3-202ENST00000429136 FGD5Q6ZNL6 1462 aa7.82□□□□□ -1.16
ATP13A3-202ENST00000429136 IGF1RP08069 1367 aa7.82□□□□□ -1.16
ATP13A3-202ENST00000429136 YTHDC1Q96MU7 727 aaKnown RBP7.81□□□□□ -1.16
ATP13A3-202ENST00000429136 CCNB3Q8WWL7 1395 aa7.81□□□□□ -1.16
ATP13A3-202ENST00000429136 KANK4Q5T7N3 995 aaPredicted RBP7.8□□□□□ -1.16
ATP13A3-202ENST00000429136 PELP1Q8IZL8 1130 aaKnown RBP7.8□□□□□ -1.16
ATP13A3-202ENST00000429136 PDS5BQ9NTI5 1447 aa7.8□□□□□ -1.16
ATP13A3-202ENST00000429136 ACIN1Q9UKV3 1341 aaKnown RBP7.79□□□□□ -1.16
ATP13A3-202ENST00000429136 CC2D2AQ9P2K1 1620 aa7.79□□□□□ -1.16
ATP13A3-202ENST00000429136 ARAP1Q96P48 1450 aa7.78□□□□□ -1.16
ATP13A3-202ENST00000429136 MTUS2Q5JR59 1369 aa7.76□□□□□ -1.17
ATP13A3-202ENST00000429136 ARHGAP35Q9NRY4 1499 aa7.75□□□□□ -1.17
ATP13A3-202ENST00000429136 FMN1Q68DA7 1419 aa7.74□□□□□ -1.17
ATP13A3-202ENST00000429136 NEUROD1Q13562 356 aa7.74□□□□□ -1.17
ATP13A3-202ENST00000429136 DNMBPQ6XZF7 1577 aa7.73□□□□□ -1.17
ATP13A3-202ENST00000429136 RAD54L2Q9Y4B4 1467 aa7.73□□□□□ -1.17
ATP13A3-202ENST00000429136 TOPBP1Q92547 1522 aa7.72□□□□□ -1.17
ATP13A3-202ENST00000429136 TDRD9Q8NDG6 1382 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms