RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 AEBP2Q6ZN18 517 aaPredicted RBP18.08■□□□□ 0.48
XRCC4-203ENST00000396027 CHIC1Q5VXU3 224 aa17.05■□□□□ 0.32
XRCC4-203ENST00000396027 SENP3Q9H4L4 574 aaPredicted RBP15.69■□□□□ 0.1
XRCC4-203ENST00000396027 PHF23Q9BUL5 403 aaPredicted RBP15.3■□□□□ 0.04
XRCC4-203ENST00000396027 POTEDQ86YR6 584 aa14.99□□□□□ -0.01
XRCC4-203ENST00000396027 FOXD1Q16676 465 aa14.62□□□□□ -0.07
XRCC4-203ENST00000396027 MSH5O43196 834 aa14.11□□□□□ -0.15
XRCC4-203ENST00000396027 PIAS4Q8N2W9 510 aaPredicted RBP13.51□□□□□ -0.25
XRCC4-203ENST00000396027 PPP6R1Q9UPN7 881 aa13□□□□□ -0.33
XRCC4-203ENST00000396027 ADRA2BP18089 450 aa12.93□□□□□ -0.34
XRCC4-203ENST00000396027 PLPPR3Q6T4P5 718 aa12.88□□□□□ -0.35
XRCC4-203ENST00000396027 CACNB1Q02641 598 aaPredicted RBP12.52□□□□□ -0.4
XRCC4-203ENST00000396027 DMRT2Q9Y5R5 561 aa12.3□□□□□ -0.44
XRCC4-203ENST00000396027 MAPK8IP2Q13387 824 aaPredicted RBP12.09□□□□□ -0.47
XRCC4-203ENST00000396027 SCAF1Q9H7N4 1312 aaKnown RBP12.04□□□□□ -0.48
XRCC4-203ENST00000396027 RNF39Q9H2S5 420 aa11.9□□□□□ -0.5
XRCC4-203ENST00000396027 DCAF8L1A6NGE4 600 aa11.79□□□□□ -0.52
XRCC4-203ENST00000396027 C1QBPQ07021 282 aaKnown RBP11.75□□□□□ -0.53
XRCC4-203ENST00000396027 POTEHQ6S545 545 aa11.62□□□□□ -0.55
XRCC4-203ENST00000396027 HOXD11P31277 338 aaPredicted RBP11.54□□□□□ -0.56
XRCC4-203ENST00000396027 DNAJC5BQ9UF47 199 aa11.4□□□□□ -0.58
XRCC4-203ENST00000396027 RNF216Q9NWF9 866 aaPredicted RBP11.27□□□□□ -0.61
XRCC4-203ENST00000396027 CNKSR2Q8WXI2 1034 aa11.16□□□□□ -0.62
XRCC4-203ENST00000396027 PPP4R3CPQ6ZMV5 832 aa11.14□□□□□ -0.63
XRCC4-203ENST00000396027 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.99□□□□□ -0.65
XRCC4-203ENST00000396027 DSG3P32926 999 aa10.86□□□□□ -0.67
XRCC4-203ENST00000396027 CAPN15O75808 1086 aa10.75□□□□□ -0.69
XRCC4-203ENST00000396027 SPINK5Q9NQ38 1064 aaPredicted RBP10.67□□□□□ -0.7
XRCC4-203ENST00000396027 U3KPZ7 1027 aaPredicted RBP10.62□□□□□ -0.71
XRCC4-203ENST00000396027 NCBP3Q53F19 620 aaKnown RBP10.58□□□□□ -0.72
XRCC4-203ENST00000396027 SP7Q8TDD2 431 aaPredicted RBP10.54□□□□□ -0.72
XRCC4-203ENST00000396027 RBM42Q9BTD8 480 aaKnown RBP10.51□□□□□ -0.73
XRCC4-203ENST00000396027 CHRDL2Q6WN34 429 aa10.49□□□□□ -0.73
XRCC4-203ENST00000396027 APLP2Q06481 763 aa10.44□□□□□ -0.74
XRCC4-203ENST00000396027 ZNF219Q9P2Y4 722 aaPredicted RBP10.42□□□□□ -0.74
XRCC4-203ENST00000396027 ABCB7O75027 752 aa10.37□□□□□ -0.75
XRCC4-203ENST00000396027 TRHP20396 242 aaPredicted RBP10.37□□□□□ -0.75
XRCC4-203ENST00000396027 NPM3O75607 178 aaKnown RBP10.3□□□□□ -0.76
XRCC4-203ENST00000396027 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.21□□□□□ -0.78
XRCC4-203ENST00000396027 HNRNPUL2Q1KMD3 747 aaKnown RBP10.21□□□□□ -0.78
XRCC4-203ENST00000396027 HAX1O00165 279 aa10.1□□□□□ -0.79
XRCC4-203ENST00000396027 SAMD1Q6SPF0 538 aaPredicted RBP10.07□□□□□ -0.8
XRCC4-203ENST00000396027 AKT1S1Q96B36 256 aa10.05□□□□□ -0.8
XRCC4-203ENST00000396027 PIP4P2Q8N4L2 257 aa10.04□□□□□ -0.8
XRCC4-203ENST00000396027 SLC4A2P04920 1241 aa10□□□□□ -0.81
XRCC4-203ENST00000396027 POLA2Q14181 598 aa9.92□□□□□ -0.82
XRCC4-203ENST00000396027 REM2Q8IYK8 340 aaPredicted RBP9.9□□□□□ -0.82
XRCC4-203ENST00000396027 FXR2P51116 673 aaKnown RBP eCLIP9.89□□□□□ -0.83
XRCC4-203ENST00000396027 LHX8Q68G74 356 aa9.87□□□□□ -0.83
XRCC4-203ENST00000396027 PLSCR2Q9NRY7 297 aa9.87□□□□□ -0.83
XRCC4-203ENST00000396027 EVX2Q03828 476 aa9.81□□□□□ -0.84
XRCC4-203ENST00000396027 ZBTB12Q9Y330 459 aaPredicted RBP9.8□□□□□ -0.84
XRCC4-203ENST00000396027 PITPNM1O00562 1244 aa9.78□□□□□ -0.84
XRCC4-203ENST00000396027 GABBR2O75899 941 aa9.63□□□□□ -0.87
XRCC4-203ENST00000396027 MYCNP04198 464 aaPredicted RBP9.62□□□□□ -0.87
XRCC4-203ENST00000396027 OSCARQ8IYS5 282 aa9.61□□□□□ -0.87
XRCC4-203ENST00000396027 C19orf67A6NJJ6 358 aa9.61□□□□□ -0.87
XRCC4-203ENST00000396027 PRKAR2AP13861 404 aaKnown RBP9.55□□□□□ -0.88
XRCC4-203ENST00000396027 SPDYE1Q8NFV5 336 aaPredicted RBP9.4□□□□□ -0.91
XRCC4-203ENST00000396027 CLCN6P51797 869 aa9.39□□□□□ -0.91
XRCC4-203ENST00000396027 SPDYE2BA6NHP3 402 aa9.36□□□□□ -0.91
XRCC4-203ENST00000396027 POTEIP0CG38 1075 aa9.36□□□□□ -0.91
XRCC4-203ENST00000396027 SPDYE6P0CI01 402 aa9.36□□□□□ -0.91
XRCC4-203ENST00000396027 SPDYE2Q495Y8 402 aa9.36□□□□□ -0.91
XRCC4-203ENST00000396027 KCNA4P22459 653 aa9.36□□□□□ -0.91
XRCC4-203ENST00000396027 PCDH10Q9P2E7 1040 aa9.35□□□□□ -0.91
XRCC4-203ENST00000396027 CLEC11AQ9Y240 323 aa9.35□□□□□ -0.91
XRCC4-203ENST00000396027 POTEMA6NI47 508 aa9.32□□□□□ -0.92
XRCC4-203ENST00000396027 ATF5Q9Y2D1 282 aaPredicted RBP9.31□□□□□ -0.92
XRCC4-203ENST00000396027 POTEGQ6S5H5 508 aa9.26□□□□□ -0.93
XRCC4-203ENST00000396027 DCBLD2Q96PD2 775 aa9.26□□□□□ -0.93
XRCC4-203ENST00000396027 CD44P16070 742 aaKnown RBP9.21□□□□□ -0.94
XRCC4-203ENST00000396027 CHADLQ6NUI6 762 aa9.2□□□□□ -0.94
XRCC4-203ENST00000396027 OTUD5Q96G74 571 aa9.2□□□□□ -0.94
XRCC4-203ENST00000396027 FBLN2P98095 1184 aa9.18□□□□□ -0.94
XRCC4-203ENST00000396027 PRR29P0C7W0 189 aa9.13□□□□□ -0.95
XRCC4-203ENST00000396027 SSUH2Q9Y2M2 353 aa9.11□□□□□ -0.95
XRCC4-203ENST00000396027 ZNF692Q9BU19 519 aaPredicted RBP9.09□□□□□ -0.95
XRCC4-203ENST00000396027 FOXD4L1Q9NU39 408 aa9.07□□□□□ -0.96
XRCC4-203ENST00000396027 ZNF579Q8NAF0 562 aaKnown RBP9.05□□□□□ -0.96
XRCC4-203ENST00000396027 FARP1Q9Y4F1 1045 aaPredicted RBP9.05□□□□□ -0.96
XRCC4-203ENST00000396027 POTEB2H3BUK9 544 aa9.01□□□□□ -0.97
XRCC4-203ENST00000396027 MAMSTRQ6ZN01 415 aa8.95□□□□□ -0.98
XRCC4-203ENST00000396027 ZRANB1Q9UGI0 708 aa8.95□□□□□ -0.98
XRCC4-203ENST00000396027 ATXN8OSP0DMR3 200 aa8.94□□□□□ -0.98
XRCC4-203ENST00000396027 GALR2O43603 387 aaPredicted RBP8.91□□□□□ -0.98
XRCC4-203ENST00000396027 PABPN1Q86U42 306 aaKnown RBP eCLIP8.9□□□□□ -0.98
XRCC4-203ENST00000396027 MKRN4PQ13434 485 aaPredicted RBP8.87□□□□□ -0.99
XRCC4-203ENST00000396027 LCE2DQ5TA82 110 aaPredicted RBP8.86□□□□□ -0.99
XRCC4-203ENST00000396027 FAM163AQ96GL9 167 aaPredicted RBP8.86□□□□□ -0.99
XRCC4-203ENST00000396027 C7P10643 843 aa8.81□□□□□ -1
XRCC4-203ENST00000396027 SCUBE2Q9NQ36 999 aa8.81□□□□□ -1
XRCC4-203ENST00000396027 SLC39A7Q92504 469 aa8.8□□□□□ -1
XRCC4-203ENST00000396027 METRNQ9UJH8 293 aa8.8□□□□□ -1
XRCC4-203ENST00000396027 PAK3O75914 559 aaPredicted RBP8.8□□□□□ -1
XRCC4-203ENST00000396027 CDAN1Q8IWY9 1227 aa8.78□□□□□ -1
XRCC4-203ENST00000396027 PELP1Q8IZL8 1130 aaKnown RBP8.78□□□□□ -1
XRCC4-203ENST00000396027 POTEJP0CG39 1038 aa8.76□□□□□ -1.01
XRCC4-203ENST00000396027 SLC4A1APQ9BWU0 796 aaKnown RBP8.75□□□□□ -1.01
XRCC4-203ENST00000396027 ASTLQ6HA08 431 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms