RNA–Protein interactions for RNA: ENST00000256031.8

ATP13A3-201, Transcript of ATPase 13A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ATP13A3, Length 7,322 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-201ENST00000256031 NISCHQ9Y2I1 1504 aa4.65□□□□□ -1.67
ATP13A3-201ENST00000256031 MYO15BQ96JP2 1530 aa4.28□□□□□ -1.72
ATP13A3-201ENST00000256031 DCAF1Q9Y4B6 1507 aa4.18□□□□□ -1.74
ATP13A3-201ENST00000256031 SHROOM4Q9ULL8 1493 aa4.1□□□□□ -1.75
ATP13A3-201ENST00000256031 CCDC180Q9P1Z9 1646 aa4.08□□□□□ -1.76
ATP13A3-201ENST00000256031 APLP2Q06481 763 aa4.01□□□□□ -1.77
ATP13A3-201ENST00000256031 SLC24A1O60721 1099 aa4.01□□□□□ -1.77
ATP13A3-201ENST00000256031 PRKCSHP14314 528 aaPredicted RBP3.99□□□□□ -1.77
ATP13A3-201ENST00000256031 ZCCHC6Q5VYS8 1495 aaKnown RBP3.93□□□□□ -1.78
ATP13A3-201ENST00000256031 NACADO15069 1562 aa3.9□□□□□ -1.79
ATP13A3-201ENST00000256031 DAXXQ9UER7 740 aaPredicted RBP3.8□□□□□ -1.8
ATP13A3-201ENST00000256031 RB1CC1Q8TDY2 1594 aa3.76□□□□□ -1.81
ATP13A3-201ENST00000256031 NCAPD3P42695 1498 aa3.73□□□□□ -1.81
ATP13A3-201ENST00000256031 PEG3Q9GZU2 1588 aa3.72□□□□□ -1.81
ATP13A3-201ENST00000256031 BAZ1BQ9UIG0 1483 aaKnown RBP3.71□□□□□ -1.82
ATP13A3-201ENST00000256031 NCBP3Q53F19 620 aaKnown RBP3.66□□□□□ -1.82
ATP13A3-201ENST00000256031 BICRAQ9NZM4 1560 aa3.64□□□□□ -1.83
ATP13A3-201ENST00000256031 HMGXB3Q12766 1538 aa3.64□□□□□ -1.83
ATP13A3-201ENST00000256031 TTBK1Q5TCY1 1321 aaPredicted RBP3.62□□□□□ -1.83
ATP13A3-201ENST00000256031 PLPPR3Q6T4P5 718 aa3.62□□□□□ -1.83
ATP13A3-201ENST00000256031 ABCC9O60706 1549 aa3.62□□□□□ -1.83
ATP13A3-201ENST00000256031 BAZ1AQ9NRL2 1556 aaPredicted RBP3.62□□□□□ -1.83
ATP13A3-201ENST00000256031 PELP1Q8IZL8 1130 aaKnown RBP3.57□□□□□ -1.84
ATP13A3-201ENST00000256031 ATAD2BQ9ULI0 1458 aa3.56□□□□□ -1.84
ATP13A3-201ENST00000256031 RTN4Q9NQC3 1192 aaKnown RBP3.55□□□□□ -1.84
ATP13A3-201ENST00000256031 FAM9AQ8IZU1 332 aaPredicted RBP3.55□□□□□ -1.84
ATP13A3-201ENST00000256031 RSF1Q96T23 1441 aaPredicted RBP3.55□□□□□ -1.84
ATP13A3-201ENST00000256031 SMARCA2P51531 1590 aa3.55□□□□□ -1.84
ATP13A3-201ENST00000256031 KLHL34Q8N239 644 aa3.53□□□□□ -1.84
ATP13A3-201ENST00000256031 PLEKHG5O94827 1062 aa3.52□□□□□ -1.85
ATP13A3-201ENST00000256031 CFTRP13569 1480 aa3.52□□□□□ -1.85
ATP13A3-201ENST00000256031 CADPSQ9ULU8 1353 aa3.5□□□□□ -1.85
ATP13A3-201ENST00000256031 EIF4G1Q04637 1599 aaKnown RBP3.49□□□□□ -1.85
ATP13A3-201ENST00000256031 ABCC8Q09428 1581 aa3.48□□□□□ -1.85
ATP13A3-201ENST00000256031 HRCP23327 699 aa3.48□□□□□ -1.85
ATP13A3-201ENST00000256031 TIMELESSQ9UNS1 1208 aa3.47□□□□□ -1.85
ATP13A3-201ENST00000256031 ARXQ96QS3 562 aa3.47□□□□□ -1.85
ATP13A3-201ENST00000256031 MYT1Q01538 1121 aa3.47□□□□□ -1.85
ATP13A3-201ENST00000256031 EEA1Q15075 1411 aa3.46□□□□□ -1.86
ATP13A3-201ENST00000256031 CECR2Q9BXF3 1484 aa3.46□□□□□ -1.86
ATP13A3-201ENST00000256031 LOC105371045A0A1W2PR82 267 aa3.46□□□□□ -1.86
ATP13A3-201ENST00000256031 AEBP2Q6ZN18 517 aaPredicted RBP3.45□□□□□ -1.86
ATP13A3-201ENST00000256031 SCRIBQ14160 1630 aa3.45□□□□□ -1.86
ATP13A3-201ENST00000256031 TOP2AP11388 1531 aaKnown RBP3.45□□□□□ -1.86
ATP13A3-201ENST00000256031 BCL11AQ9H165 835 aa3.44□□□□□ -1.86
ATP13A3-201ENST00000256031 WDR97A6NE52 1622 aa3.44□□□□□ -1.86
ATP13A3-201ENST00000256031 SMARCA4P51532 1647 aa3.43□□□□□ -1.86
ATP13A3-201ENST00000256031 MROH2BQ7Z745 1585 aa3.43□□□□□ -1.86
ATP13A3-201ENST00000256031 PDS5BQ9NTI5 1447 aa3.43□□□□□ -1.86
ATP13A3-201ENST00000256031 LAMC3Q9Y6N6 1575 aa3.41□□□□□ -1.86
ATP13A3-201ENST00000256031 ERICH6Q7L0X2 663 aa3.4□□□□□ -1.87
ATP13A3-201ENST00000256031 PPP6R1Q9UPN7 881 aa3.39□□□□□ -1.87
ATP13A3-201ENST00000256031 CUX2O14529 1486 aa3.39□□□□□ -1.87
ATP13A3-201ENST00000256031 ABCA10Q8WWZ4 1543 aa3.36□□□□□ -1.87
ATP13A3-201ENST00000256031 KCNA4P22459 653 aa3.35□□□□□ -1.87
ATP13A3-201ENST00000256031 CSRNP3Q8WYN3 585 aa3.35□□□□□ -1.87
ATP13A3-201ENST00000256031 DNAJC5BQ9UF47 199 aa3.34□□□□□ -1.88
ATP13A3-201ENST00000256031 UBE2Q2Q8WVN8 375 aa3.33□□□□□ -1.88
ATP13A3-201ENST00000256031 IFT140Q96RY7 1462 aa3.33□□□□□ -1.88
ATP13A3-201ENST00000256031 PRXQ9BXM0 1461 aa3.33□□□□□ -1.88
ATP13A3-201ENST00000256031 CCDC88BA6NC98 1476 aa3.32□□□□□ -1.88
ATP13A3-201ENST00000256031 WDR62O43379 1518 aa3.32□□□□□ -1.88
ATP13A3-201ENST00000256031 EIF5BO60841 1220 aaKnown RBP3.32□□□□□ -1.88
ATP13A3-201ENST00000256031 NUP160Q12769 1436 aa3.32□□□□□ -1.88
ATP13A3-201ENST00000256031 WRNQ14191 1432 aaPredicted RBP eCLIP3.31□□□□□ -1.88
ATP13A3-201ENST00000256031 CC2D2AQ9P2K1 1620 aa3.3□□□□□ -1.88
ATP13A3-201ENST00000256031 MRC2Q9UBG0 1479 aa3.3□□□□□ -1.88
ATP13A3-201ENST00000256031 MAGI1Q96QZ7 1491 aaPredicted RBP3.29□□□□□ -1.88
ATP13A3-201ENST00000256031 ERICH3Q5RHP9 1530 aa3.29□□□□□ -1.88
ATP13A3-201ENST00000256031 SCAF1Q9H7N4 1312 aaKnown RBP3.29□□□□□ -1.88
ATP13A3-201ENST00000256031 DNMBPQ6XZF7 1577 aa3.28□□□□□ -1.88
ATP13A3-201ENST00000256031 FANCD2Q9BXW9 1451 aa3.28□□□□□ -1.88
ATP13A3-201ENST00000256031 TOPBP1Q92547 1522 aa3.28□□□□□ -1.89
ATP13A3-201ENST00000256031 PABPN1Q86U42 306 aaKnown RBP eCLIP3.27□□□□□ -1.89
ATP13A3-201ENST00000256031 IGF1RP08069 1367 aa3.27□□□□□ -1.89
ATP13A3-201ENST00000256031 ERCC6Q03468 1493 aa3.27□□□□□ -1.89
ATP13A3-201ENST00000256031 KIAA0586Q9BVV6 1533 aa3.27□□□□□ -1.89
ATP13A3-201ENST00000256031 POLA1P09884 1462 aaPredicted RBP3.26□□□□□ -1.89
ATP13A3-201ENST00000256031 ACIN1Q9UKV3 1341 aaKnown RBP3.26□□□□□ -1.89
ATP13A3-201ENST00000256031 FHAD1B1AJZ9 1412 aa3.26□□□□□ -1.89
ATP13A3-201ENST00000256031 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.26□□□□□ -1.89
ATP13A3-201ENST00000256031 NESP48681 1621 aa3.26□□□□□ -1.89
ATP13A3-201ENST00000256031 SAMD1Q6SPF0 538 aaPredicted RBP3.26□□□□□ -1.89
ATP13A3-201ENST00000256031 TAOK2Q9UL54 1235 aa3.26□□□□□ -1.89
ATP13A3-201ENST00000256031 CEP164Q9UPV0 1460 aa3.26□□□□□ -1.89
ATP13A3-201ENST00000256031 MAP3K1Q13233 1512 aa3.26□□□□□ -1.89
ATP13A3-201ENST00000256031 GRIN2BQ13224 1484 aa3.25□□□□□ -1.89
ATP13A3-201ENST00000256031 KIF27Q86VH2 1401 aa3.25□□□□□ -1.89
ATP13A3-201ENST00000256031 PHLDB1Q86UU1 1377 aa3.25□□□□□ -1.89
ATP13A3-201ENST00000256031 AMER1Q5JTC6 1135 aaPredicted RBP3.25□□□□□ -1.89
ATP13A3-201ENST00000256031 TOP2BQ02880 1626 aa3.25□□□□□ -1.89
ATP13A3-201ENST00000256031 URB2Q14146 1524 aaKnown RBP3.25□□□□□ -1.89
ATP13A3-201ENST00000256031 TULP1O00294 542 aaPredicted RBP3.24□□□□□ -1.89
ATP13A3-201ENST00000256031 AQRO60306 1485 aaKnown RBP eCLIP3.24□□□□□ -1.895e-7■■■■■ 27.6
ATP13A3-201ENST00000256031 KDM5BQ9UGL1 1544 aa3.24□□□□□ -1.89
ATP13A3-201ENST00000256031 UHRF1BP1LA0JNW5 1464 aa3.23□□□□□ -1.89
ATP13A3-201ENST00000256031 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.23□□□□□ -1.89
ATP13A3-201ENST00000256031 ARAP3Q8WWN8 1544 aa3.22□□□□□ -1.89
ATP13A3-201ENST00000256031 TNIKQ9UKE5 1360 aa3.22□□□□□ -1.89
ATP13A3-201ENST00000256031 ANO8Q9HCE9 1232 aaPredicted RBP3.21□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms