RNA–Protein interactions for RNA: ENST00000406122.5

ATL2-204, Transcript of atlastin GTPase 2, humanhuman

TSL 5 BASIC

Gene ATL2, Length 2,864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL2-204ENST00000406122 SLC24A1O60721 1099 aa22.29■■□□□ 1.16
ATL2-204ENST00000406122 MYT1Q01538 1121 aa21.84■■□□□ 1.09
ATL2-204ENST00000406122 PELP1Q8IZL8 1130 aaKnown RBP21.83■■□□□ 1.09
ATL2-204ENST00000406122 TTBK1Q5TCY1 1321 aaPredicted RBP21.4■■□□□ 1.02
ATL2-204ENST00000406122 PRKCSHP14314 528 aaPredicted RBP21.31■■□□□ 1
ATL2-204ENST00000406122 APLP2Q06481 763 aa20.95■□□□□ 0.94
ATL2-204ENST00000406122 DAXXQ9UER7 740 aaPredicted RBP20.81■□□□□ 0.92
ATL2-204ENST00000406122 ERICH6Q7L0X2 663 aa20.79■□□□□ 0.92
ATL2-204ENST00000406122 NISCHQ9Y2I1 1504 aa20.11■□□□□ 0.81
ATL2-204ENST00000406122 BCL11AQ9H165 835 aa19.87■□□□□ 0.77
ATL2-204ENST00000406122 EIF5BO60841 1220 aaKnown RBP19.75■□□□□ 0.75
ATL2-204ENST00000406122 NCBP3Q53F19 620 aaKnown RBP19.69■□□□□ 0.74
ATL2-204ENST00000406122 FAM9AQ8IZU1 332 aaPredicted RBP19.57■□□□□ 0.72
ATL2-204ENST00000406122 PLPPR3Q6T4P5 718 aa19.56■□□□□ 0.72
ATL2-204ENST00000406122 RTN4Q9NQC3 1192 aaKnown RBP19.42■□□□□ 0.7
ATL2-204ENST00000406122 EHMT2Q96KQ7 1210 aa19.41■□□□□ 0.7
ATL2-204ENST00000406122 PLEKHG5O94827 1062 aa19.37■□□□□ 0.69
ATL2-204ENST00000406122 ARXQ96QS3 562 aa19.15■□□□□ 0.66
ATL2-204ENST00000406122 TIMELESSQ9UNS1 1208 aa19.07■□□□□ 0.64
ATL2-204ENST00000406122 KLHL34Q8N239 644 aa19.06■□□□□ 0.64
ATL2-204ENST00000406122 RANGAP1P46060 587 aaPredicted RBP18.95■□□□□ 0.62
ATL2-204ENST00000406122 SCAF1Q9H7N4 1312 aaKnown RBP18.85■□□□□ 0.61
ATL2-204ENST00000406122 PODXL2Q9NZ53 605 aa18.84■□□□□ 0.61
ATL2-204ENST00000406122 TULP1O00294 542 aaPredicted RBP18.67■□□□□ 0.58
ATL2-204ENST00000406122 UBE2Q2Q8WVN8 375 aa18.64■□□□□ 0.58
ATL2-204ENST00000406122 CENPBP07199 599 aaPredicted RBP18.54■□□□□ 0.56
ATL2-204ENST00000406122 AMER1Q5JTC6 1135 aaPredicted RBP18.52■□□□□ 0.56
ATL2-204ENST00000406122 HOMEZQ8IX15 550 aa18.51■□□□□ 0.55
ATL2-204ENST00000406122 HRCP23327 699 aa18.48■□□□□ 0.55
ATL2-204ENST00000406122 AEBP2Q6ZN18 517 aaPredicted RBP18.44■□□□□ 0.54
ATL2-204ENST00000406122 PDIA4P13667 645 aaKnown RBP18.32■□□□□ 0.52
ATL2-204ENST00000406122 PKNOX2Q96KN3 472 aa18.3■□□□□ 0.52
ATL2-204ENST00000406122 ANO8Q9HCE9 1232 aaPredicted RBP18.29■□□□□ 0.52
ATL2-204ENST00000406122 TAOK2Q9UL54 1235 aa18.2■□□□□ 0.5
ATL2-204ENST00000406122 KCNA4P22459 653 aa18.2■□□□□ 0.5
ATL2-204ENST00000406122 PDE4CQ08493 712 aa18.14■□□□□ 0.49
ATL2-204ENST00000406122 ANP32EQ9BTT0 268 aa18.13■□□□□ 0.49
ATL2-204ENST00000406122 CCDC180Q9P1Z9 1646 aa18.11■□□□□ 0.49
ATL2-204ENST00000406122 NPM2Q86SE8 214 aaKnown RBP18.08■□□□□ 0.48
ATL2-204ENST00000406122 NEFLP07196 543 aa18.01■□□□□ 0.47
ATL2-204ENST00000406122 CSRNP3Q8WYN3 585 aa17.96■□□□□ 0.47
ATL2-204ENST00000406122 TPRNQ4KMQ1 711 aa17.94■□□□□ 0.46
ATL2-204ENST00000406122 C14orf37Q86TY3 774 aa17.92■□□□□ 0.46
ATL2-204ENST00000406122 LOC105371045A0A1W2PR82 267 aa17.91■□□□□ 0.46
ATL2-204ENST00000406122 CHMP4AQ9BY43 222 aa17.84■□□□□ 0.45
ATL2-204ENST00000406122 BCL11BQ9C0K0 894 aaPredicted RBP17.84■□□□□ 0.45
ATL2-204ENST00000406122 PPARGC1BQ86YN6 1023 aaKnown RBP17.8■□□□□ 0.44
ATL2-204ENST00000406122 GTF3C3Q9Y5Q9 886 aa17.78■□□□□ 0.44
ATL2-204ENST00000406122 HAP1P54257 671 aaPredicted RBP17.78■□□□□ 0.44
ATL2-204ENST00000406122 DHX37Q8IY37 1157 aaKnown RBP17.77■□□□□ 0.44
ATL2-204ENST00000406122 ABCC9O60706 1549 aa17.76■□□□□ 0.43
ATL2-204ENST00000406122 TAF7LQ5H9L4 462 aa17.76■□□□□ 0.43
ATL2-204ENST00000406122 FGD1P98174 961 aa17.75■□□□□ 0.43
ATL2-204ENST00000406122 SAMD1Q6SPF0 538 aaPredicted RBP17.67■□□□□ 0.42
ATL2-204ENST00000406122 BCANQ96GW7 911 aa17.67■□□□□ 0.42
ATL2-204ENST00000406122 SALL2Q9Y467 1007 aaPredicted RBP17.66■□□□□ 0.42
ATL2-204ENST00000406122 ACIN1Q9UKV3 1341 aaKnown RBP17.64■□□□□ 0.41
ATL2-204ENST00000406122 CCDC136Q96JN2 1154 aa17.62■□□□□ 0.41
ATL2-204ENST00000406122 BRD2P25440 801 aaKnown RBP17.58■□□□□ 0.41
ATL2-204ENST00000406122 TRIM26Q12899 539 aaPredicted RBP17.57■□□□□ 0.4
ATL2-204ENST00000406122 FBXO3Q9UK99 471 aa17.55■□□□□ 0.4
ATL2-204ENST00000406122 A0A0U1RQG5 324 aaPredicted RBP17.48■□□□□ 0.39
ATL2-204ENST00000406122 AAMPQ13685 434 aa17.42■□□□□ 0.38
ATL2-204ENST00000406122 CNKSR2Q8WXI2 1034 aa17.4■□□□□ 0.38
ATL2-204ENST00000406122 NEUROD1Q13562 356 aa17.39■□□□□ 0.37
ATL2-204ENST00000406122 TMEM132AQ24JP5 1023 aa17.35■□□□□ 0.37
ATL2-204ENST00000406122 ERICH6BQ5W0A0 696 aa17.34■□□□□ 0.37
ATL2-204ENST00000406122 ZEB1P37275 1124 aaPredicted RBP17.33■□□□□ 0.36
ATL2-204ENST00000406122 PAXIP1Q6ZW49 1069 aaPredicted RBP17.32■□□□□ 0.36
ATL2-204ENST00000406122 CDK11BP21127 795 aaKnown RBP17.29■□□□□ 0.36
ATL2-204ENST00000406122 CDK11AQ9UQ88 783 aaPredicted RBP17.29■□□□□ 0.36
ATL2-204ENST00000406122 DCAF8L2P0C7V8 631 aa17.28■□□□□ 0.36
ATL2-204ENST00000406122 CHIC1Q5VXU3 224 aa17.25■□□□□ 0.35
ATL2-204ENST00000406122 RSPH6AQ9H0K4 717 aa17.25■□□□□ 0.35
ATL2-204ENST00000406122 RSPH4AQ5TD94 716 aa17.25■□□□□ 0.35
ATL2-204ENST00000406122 RBM10P98175 930 aaKnown RBP17.24■□□□□ 0.35
ATL2-204ENST00000406122 SUPT5HO00267 1087 aaKnown RBP17.21■□□□□ 0.35
ATL2-204ENST00000406122 UBTFP17480 764 aaKnown RBP17.19■□□□□ 0.34
ATL2-204ENST00000406122 CLSPNQ9HAW4 1339 aa17.19■□□□□ 0.34
ATL2-204ENST00000406122 PLCB2Q00722 1185 aa17.17■□□□□ 0.34
ATL2-204ENST00000406122 DEKP35659 375 aaKnown RBP17.16■□□□□ 0.34
ATL2-204ENST00000406122 RB1CC1Q8TDY2 1594 aa17.13■□□□□ 0.33
ATL2-204ENST00000406122 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.13■□□□□ 0.33
ATL2-204ENST00000406122 PPP6R1Q9UPN7 881 aa17.13■□□□□ 0.33
ATL2-204ENST00000406122 IRX6P78412 446 aaPredicted RBP17.12■□□□□ 0.33
ATL2-204ENST00000406122 ZMYND15Q9H091 742 aa17.11■□□□□ 0.33
ATL2-204ENST00000406122 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.1■□□□□ 0.33
ATL2-204ENST00000406122 NAP1L5Q96NT1 182 aaPredicted RBP17.08■□□□□ 0.33
ATL2-204ENST00000406122 HSP90B1P14625 803 aaKnown RBP17.08■□□□□ 0.32
ATL2-204ENST00000406122 IGSF3O75054 1194 aa17.07■□□□□ 0.32
ATL2-204ENST00000406122 NACADO15069 1562 aa17.07■□□□□ 0.32
ATL2-204ENST00000406122 ZNF326Q5BKZ1 582 aaKnown RBP17.06■□□□□ 0.32
ATL2-204ENST00000406122 BCCIPQ9P287 314 aaKnown RBP eCLIP16.98■□□□□ 0.31
ATL2-204ENST00000406122 GLIPR1L2Q4G1C9 344 aa16.97■□□□□ 0.31
ATL2-204ENST00000406122 MYO15BQ96JP2 1530 aa16.95■□□□□ 0.3
ATL2-204ENST00000406122 CFAP44Q96MT7 982 aa16.94■□□□□ 0.3
ATL2-204ENST00000406122 POLR3GLQ9BT43 218 aa16.91■□□□□ 0.3
ATL2-204ENST00000406122 MYT1LQ9UL68 1186 aa16.86■□□□□ 0.29
ATL2-204ENST00000406122 VSIG10Q8N0Z9 540 aa16.83■□□□□ 0.29
ATL2-204ENST00000406122 SHROOM4Q9ULL8 1493 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms