RNA–Protein interactions for RNA: ENST00000468330.1

CMC1-207, Transcript of C-X9-C motif containing 1, humanhuman

TSL 4

Gene CMC1, Length 551 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-207ENST00000468330 AEBP2Q6ZN18 517 aaPredicted RBP24.39■■□□□ 1.49
CMC1-207ENST00000468330 CHIC1Q5VXU3 224 aa24.02■■□□□ 1.44
CMC1-207ENST00000468330 PHF23Q9BUL5 403 aaPredicted RBP21.12■□□□□ 0.97
CMC1-207ENST00000468330 SENP3Q9H4L4 574 aaPredicted RBP20.73■□□□□ 0.91
CMC1-207ENST00000468330 PLPPR3Q6T4P5 718 aa19.63■□□□□ 0.73
CMC1-207ENST00000468330 FOXD1Q16676 465 aa19.19■□□□□ 0.66
CMC1-207ENST00000468330 ADRA2BP18089 450 aa18.63■□□□□ 0.57
CMC1-207ENST00000468330 PPP6R1Q9UPN7 881 aa18.59■□□□□ 0.57
CMC1-207ENST00000468330 PIAS4Q8N2W9 510 aaPredicted RBP18.2■□□□□ 0.5
CMC1-207ENST00000468330 MSH5O43196 834 aa17.67■□□□□ 0.42
CMC1-207ENST00000468330 PPP4R3CPQ6ZMV5 832 aa17.32■□□□□ 0.36
CMC1-207ENST00000468330 KCNA4P22459 653 aa17.1■□□□□ 0.33
CMC1-207ENST00000468330 SCAF1Q9H7N4 1312 aaKnown RBP17.1■□□□□ 0.33
CMC1-207ENST00000468330 NCBP3Q53F19 620 aaKnown RBP16.96■□□□□ 0.31
CMC1-207ENST00000468330 MAPK8IP2Q13387 824 aaPredicted RBP16.85■□□□□ 0.29
CMC1-207ENST00000468330 CNKSR2Q8WXI2 1034 aa16.79■□□□□ 0.28
CMC1-207ENST00000468330 NPM3O75607 178 aaKnown RBP16.63■□□□□ 0.25
CMC1-207ENST00000468330 DMRT2Q9Y5R5 561 aa16.55■□□□□ 0.24
CMC1-207ENST00000468330 RNF216Q9NWF9 866 aaPredicted RBP16.4■□□□□ 0.22
CMC1-207ENST00000468330 SLC4A1APQ9BWU0 796 aaKnown RBP16.36■□□□□ 0.21
CMC1-207ENST00000468330 HOXD11P31277 338 aaPredicted RBP16.26■□□□□ 0.19
CMC1-207ENST00000468330 EHMT2Q96KQ7 1210 aa16.13■□□□□ 0.17
CMC1-207ENST00000468330 DNAJC5BQ9UF47 199 aa16.01■□□□□ 0.15
CMC1-207ENST00000468330 DCAF8L1A6NGE4 600 aa15.97■□□□□ 0.15
CMC1-207ENST00000468330 CSRNP3Q8WYN3 585 aa15.77■□□□□ 0.12
CMC1-207ENST00000468330 POTEDQ86YR6 584 aa15.75■□□□□ 0.11
CMC1-207ENST00000468330 FOXD4L1Q9NU39 408 aa15.7■□□□□ 0.1
CMC1-207ENST00000468330 ZBTB22O15209 634 aa15.69■□□□□ 0.1
CMC1-207ENST00000468330 SLC4A2P04920 1241 aa15.64■□□□□ 0.09
CMC1-207ENST00000468330 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.61■□□□□ 0.09
CMC1-207ENST00000468330 MYCNP04198 464 aaPredicted RBP15.39■□□□□ 0.05
CMC1-207ENST00000468330 U3KPZ7 1027 aaPredicted RBP15.29■□□□□ 0.04
CMC1-207ENST00000468330 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.22■□□□□ 0.03
CMC1-207ENST00000468330 HNRNPUL2Q1KMD3 747 aaKnown RBP15.22■□□□□ 0.03
CMC1-207ENST00000468330 SAMD1Q6SPF0 538 aaPredicted RBP15.16■□□□□ 0.02
CMC1-207ENST00000468330 ATXN8OSP0DMR3 200 aa15.11■□□□□ 0.01
CMC1-207ENST00000468330 RNF39Q9H2S5 420 aa15.11■□□□□ 0.01
CMC1-207ENST00000468330 APLP2Q06481 763 aa15.04■□□□□ -0
CMC1-207ENST00000468330 C1QBPQ07021 282 aaKnown RBP14.97□□□□□ -0.01
CMC1-207ENST00000468330 ATF5Q9Y2D1 282 aaPredicted RBP14.94□□□□□ -0.02
CMC1-207ENST00000468330 CAPN15O75808 1086 aa14.84□□□□□ -0.03
CMC1-207ENST00000468330 SPINK5Q9NQ38 1064 aaPredicted RBP14.83□□□□□ -0.04
CMC1-207ENST00000468330 TRHP20396 242 aaPredicted RBP14.81□□□□□ -0.04
CMC1-207ENST00000468330 ZNF219Q9P2Y4 722 aaPredicted RBP14.77□□□□□ -0.05
CMC1-207ENST00000468330 CACNB1Q02641 598 aaPredicted RBP14.69□□□□□ -0.06
CMC1-207ENST00000468330 POLA2Q14181 598 aa14.58□□□□□ -0.08
CMC1-207ENST00000468330 ABCB7O75027 752 aa14.55□□□□□ -0.08
CMC1-207ENST00000468330 DSG3P32926 999 aa14.46□□□□□ -0.09
CMC1-207ENST00000468330 FBLN2P98095 1184 aa14.39□□□□□ -0.11
CMC1-207ENST00000468330 ZBTB12Q9Y330 459 aaPredicted RBP14.34□□□□□ -0.11
CMC1-207ENST00000468330 FKBP8Q14318 412 aa14.32□□□□□ -0.12
CMC1-207ENST00000468330 MKRN4PQ13434 485 aaPredicted RBP14.28□□□□□ -0.12
CMC1-207ENST00000468330 SPDYE4A6NLX3 237 aa14.13□□□□□ -0.15
CMC1-207ENST00000468330 OSCARQ8IYS5 282 aa14.06□□□□□ -0.16
CMC1-207ENST00000468330 ZNF692Q9BU19 519 aaPredicted RBP13.97□□□□□ -0.17
CMC1-207ENST00000468330 SPDYE2BA6NHP3 402 aa13.94□□□□□ -0.18
CMC1-207ENST00000468330 SPDYE6P0CI01 402 aa13.94□□□□□ -0.18
CMC1-207ENST00000468330 SPDYE2Q495Y8 402 aa13.94□□□□□ -0.18
CMC1-207ENST00000468330 RBM42Q9BTD8 480 aaKnown RBP13.82□□□□□ -0.2
CMC1-207ENST00000468330 SSUH2Q9Y2M2 353 aa13.8□□□□□ -0.2
CMC1-207ENST00000468330 PROM2Q8N271 834 aa13.79□□□□□ -0.2
CMC1-207ENST00000468330 PABPN1Q86U42 306 aaKnown RBP eCLIP13.78□□□□□ -0.2
CMC1-207ENST00000468330 FBXO3Q9UK99 471 aa13.77□□□□□ -0.21
CMC1-207ENST00000468330 AKT1S1Q96B36 256 aa13.66□□□□□ -0.22
CMC1-207ENST00000468330 STAG3Q9UJ98 1225 aa13.58□□□□□ -0.24
CMC1-207ENST00000468330 VASPP50552 380 aaPredicted RBP13.54□□□□□ -0.24
CMC1-207ENST00000468330 REM2Q8IYK8 340 aaPredicted RBP13.54□□□□□ -0.24
CMC1-207ENST00000468330 SPDYE1Q8NFV5 336 aaPredicted RBP13.52□□□□□ -0.25
CMC1-207ENST00000468330 CLEC11AQ9Y240 323 aa13.51□□□□□ -0.25
CMC1-207ENST00000468330 PLCD3Q8N3E9 789 aa13.44□□□□□ -0.26
CMC1-207ENST00000468330 MIER1Q8N108 512 aa13.42□□□□□ -0.26
CMC1-207ENST00000468330 PRR29P0C7W0 189 aa13.39□□□□□ -0.27
CMC1-207ENST00000468330 PLEKHG5O94827 1062 aa13.38□□□□□ -0.27
CMC1-207ENST00000468330 PITPNM1O00562 1244 aa13.37□□□□□ -0.27
CMC1-207ENST00000468330 KLHL34Q8N239 644 aa13.37□□□□□ -0.27
CMC1-207ENST00000468330 IFNLR1Q8IU57 520 aaPredicted RBP13.35□□□□□ -0.27
CMC1-207ENST00000468330 AMER1Q5JTC6 1135 aaPredicted RBP13.34□□□□□ -0.27
CMC1-207ENST00000468330 RTN4Q9NQC3 1192 aaKnown RBP13.29□□□□□ -0.28
CMC1-207ENST00000468330 ZBTB47Q9UFB7 747 aaPredicted RBP13.24□□□□□ -0.29
CMC1-207ENST00000468330 SPOCK2Q92563 424 aa13.21□□□□□ -0.29
CMC1-207ENST00000468330 CREBZFQ9NS37 354 aa13.18□□□□□ -0.3
CMC1-207ENST00000468330 CHRDL2Q6WN34 429 aa13.16□□□□□ -0.3
CMC1-207ENST00000468330 CHADLQ6NUI6 762 aa13.1□□□□□ -0.31
CMC1-207ENST00000468330 PRKAR2AP13861 404 aaKnown RBP13.08□□□□□ -0.32
CMC1-207ENST00000468330 FXR2P51116 673 aaKnown RBP eCLIP13.06□□□□□ -0.32
CMC1-207ENST00000468330 NPM1P06748 294 aaKnown RBP eCLIP13.05□□□□□ -0.32
CMC1-207ENST00000468330 CIZ1Q9ULV3 898 aaPredicted RBP13.03□□□□□ -0.32
CMC1-207ENST00000468330 PIP4P2Q8N4L2 257 aa13.02□□□□□ -0.33
CMC1-207ENST00000468330 MNX1P50219 401 aaPredicted RBP13.01□□□□□ -0.33
CMC1-207ENST00000468330 FARP1Q9Y4F1 1045 aaPredicted RBP12.99□□□□□ -0.33
CMC1-207ENST00000468330 NUBP1P53384 320 aa12.96□□□□□ -0.33
CMC1-207ENST00000468330 DCAF8Q5TAQ9 597 aa12.96□□□□□ -0.33
CMC1-207ENST00000468330 PKD2Q13563 968 aa12.95□□□□□ -0.34
CMC1-207ENST00000468330 GSE1Q14687 1217 aa12.94□□□□□ -0.34
CMC1-207ENST00000468330 FAM212AQ96EL1 285 aa12.93□□□□□ -0.34
CMC1-207ENST00000468330 ECM2O94769 699 aaPredicted RBP12.92□□□□□ -0.34
CMC1-207ENST00000468330 DCAF8L2P0C7V8 631 aa12.89□□□□□ -0.35
CMC1-207ENST00000468330 RASEFQ8IZ41 740 aa12.89□□□□□ -0.35
CMC1-207ENST00000468330 TSPYL2Q9H2G4 693 aaPredicted RBP12.85□□□□□ -0.35
CMC1-207ENST00000468330 TRIM41Q8WV44 630 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms