RNA–Protein interactions for RNA: ENST00000511817.1

XRCC4-205, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene XRCC4, Length 1,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-205ENST00000511817 AEBP2Q6ZN18 517 aaPredicted RBP21.8■■□□□ 1.08
XRCC4-205ENST00000511817 CHIC1Q5VXU3 224 aa20.44■□□□□ 0.86
XRCC4-205ENST00000511817 SENP3Q9H4L4 574 aaPredicted RBP18.85■□□□□ 0.61
XRCC4-205ENST00000511817 PHF23Q9BUL5 403 aaPredicted RBP18.38■□□□□ 0.53
XRCC4-205ENST00000511817 POTEDQ86YR6 584 aa18.23■□□□□ 0.51
XRCC4-205ENST00000511817 FOXD1Q16676 465 aa17.62■□□□□ 0.41
XRCC4-205ENST00000511817 MSH5O43196 834 aa16.97■□□□□ 0.31
XRCC4-205ENST00000511817 PIAS4Q8N2W9 510 aaPredicted RBP16.23■□□□□ 0.19
XRCC4-205ENST00000511817 PPP6R1Q9UPN7 881 aa15.63■□□□□ 0.09
XRCC4-205ENST00000511817 ADRA2BP18089 450 aa15.52■□□□□ 0.08
XRCC4-205ENST00000511817 PLPPR3Q6T4P5 718 aa15.34■□□□□ 0.05
XRCC4-205ENST00000511817 CACNB1Q02641 598 aaPredicted RBP15.11■□□□□ 0.01
XRCC4-205ENST00000511817 DMRT2Q9Y5R5 561 aa14.77□□□□□ -0.04
XRCC4-205ENST00000511817 MAPK8IP2Q13387 824 aaPredicted RBP14.54□□□□□ -0.08
XRCC4-205ENST00000511817 RNF39Q9H2S5 420 aa14.35□□□□□ -0.11
XRCC4-205ENST00000511817 SCAF1Q9H7N4 1312 aaKnown RBP14.31□□□□□ -0.12
XRCC4-205ENST00000511817 DCAF8L1A6NGE4 600 aa14.12□□□□□ -0.15
XRCC4-205ENST00000511817 C1QBPQ07021 282 aaKnown RBP14.11□□□□□ -0.15
XRCC4-205ENST00000511817 POTEHQ6S545 545 aa14.09□□□□□ -0.15
XRCC4-205ENST00000511817 HOXD11P31277 338 aaPredicted RBP13.84□□□□□ -0.19
XRCC4-205ENST00000511817 DNAJC5BQ9UF47 199 aa13.65□□□□□ -0.22
XRCC4-205ENST00000511817 RNF216Q9NWF9 866 aaPredicted RBP13.46□□□□□ -0.26
XRCC4-205ENST00000511817 CNKSR2Q8WXI2 1034 aa13.3□□□□□ -0.28
XRCC4-205ENST00000511817 PPP4R3CPQ6ZMV5 832 aa13.28□□□□□ -0.28
XRCC4-205ENST00000511817 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.13□□□□□ -0.31
XRCC4-205ENST00000511817 DSG3P32926 999 aa13.06□□□□□ -0.32
XRCC4-205ENST00000511817 CAPN15O75808 1086 aa12.88□□□□□ -0.35
XRCC4-205ENST00000511817 SPINK5Q9NQ38 1064 aaPredicted RBP12.83□□□□□ -0.36
XRCC4-205ENST00000511817 U3KPZ7 1027 aaPredicted RBP12.75□□□□□ -0.37
XRCC4-205ENST00000511817 SP7Q8TDD2 431 aaPredicted RBP12.74□□□□□ -0.37
XRCC4-205ENST00000511817 CHRDL2Q6WN34 429 aa12.64□□□□□ -0.39
XRCC4-205ENST00000511817 NCBP3Q53F19 620 aaKnown RBP12.6□□□□□ -0.39
XRCC4-205ENST00000511817 RBM42Q9BTD8 480 aaKnown RBP12.57□□□□□ -0.4
XRCC4-205ENST00000511817 ABCB7O75027 752 aa12.46□□□□□ -0.41
XRCC4-205ENST00000511817 ZNF219Q9P2Y4 722 aaPredicted RBP12.44□□□□□ -0.42
XRCC4-205ENST00000511817 NPM3O75607 178 aaKnown RBP12.4□□□□□ -0.42
XRCC4-205ENST00000511817 TRHP20396 242 aaPredicted RBP12.4□□□□□ -0.42
XRCC4-205ENST00000511817 APLP2Q06481 763 aa12.4□□□□□ -0.42
XRCC4-205ENST00000511817 HAX1O00165 279 aa12.13□□□□□ -0.47
XRCC4-205ENST00000511817 PIP4P2Q8N4L2 257 aa12.11□□□□□ -0.47
XRCC4-205ENST00000511817 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.1□□□□□ -0.47
XRCC4-205ENST00000511817 HNRNPUL2Q1KMD3 747 aaKnown RBP12.1□□□□□ -0.47
XRCC4-205ENST00000511817 AKT1S1Q96B36 256 aa12.04□□□□□ -0.48
XRCC4-205ENST00000511817 SLC4A2P04920 1241 aa11.97□□□□□ -0.49
XRCC4-205ENST00000511817 SAMD1Q6SPF0 538 aaPredicted RBP11.97□□□□□ -0.49
XRCC4-205ENST00000511817 PLSCR2Q9NRY7 297 aa11.97□□□□□ -0.49
XRCC4-205ENST00000511817 LHX8Q68G74 356 aa11.91□□□□□ -0.5
XRCC4-205ENST00000511817 FXR2P51116 673 aaKnown RBP eCLIP11.89□□□□□ -0.51
XRCC4-205ENST00000511817 REM2Q8IYK8 340 aaPredicted RBP11.88□□□□□ -0.51
XRCC4-205ENST00000511817 EVX2Q03828 476 aa11.86□□□□□ -0.51
XRCC4-205ENST00000511817 POLA2Q14181 598 aa11.84□□□□□ -0.51
XRCC4-205ENST00000511817 PITPNM1O00562 1244 aa11.77□□□□□ -0.53
XRCC4-205ENST00000511817 KCNA4P22459 653 aa11.68□□□□□ -0.54
XRCC4-205ENST00000511817 ZBTB12Q9Y330 459 aaPredicted RBP11.65□□□□□ -0.54
XRCC4-205ENST00000511817 GABBR2O75899 941 aa11.6□□□□□ -0.55
XRCC4-205ENST00000511817 C19orf67A6NJJ6 358 aa11.56□□□□□ -0.56
XRCC4-205ENST00000511817 OSCARQ8IYS5 282 aa11.53□□□□□ -0.56
XRCC4-205ENST00000511817 MYCNP04198 464 aaPredicted RBP11.49□□□□□ -0.57
XRCC4-205ENST00000511817 PRKAR2AP13861 404 aaKnown RBP11.44□□□□□ -0.58
XRCC4-205ENST00000511817 POTEIP0CG38 1075 aa11.33□□□□□ -0.6
XRCC4-205ENST00000511817 POTEMA6NI47 508 aa11.27□□□□□ -0.61
XRCC4-205ENST00000511817 ATF5Q9Y2D1 282 aaPredicted RBP11.24□□□□□ -0.61
XRCC4-205ENST00000511817 PCDH10Q9P2E7 1040 aa11.23□□□□□ -0.61
XRCC4-205ENST00000511817 SPDYE1Q8NFV5 336 aaPredicted RBP11.21□□□□□ -0.61
XRCC4-205ENST00000511817 POTEGQ6S5H5 508 aa11.2□□□□□ -0.62
XRCC4-205ENST00000511817 CLCN6P51797 869 aa11.18□□□□□ -0.62
XRCC4-205ENST00000511817 SPDYE2BA6NHP3 402 aa11.17□□□□□ -0.62
XRCC4-205ENST00000511817 SPDYE6P0CI01 402 aa11.17□□□□□ -0.62
XRCC4-205ENST00000511817 SPDYE2Q495Y8 402 aa11.17□□□□□ -0.62
XRCC4-205ENST00000511817 CLEC11AQ9Y240 323 aa11.16□□□□□ -0.62
XRCC4-205ENST00000511817 OTUD5Q96G74 571 aa11.11□□□□□ -0.63
XRCC4-205ENST00000511817 FOXD4L1Q9NU39 408 aa11.09□□□□□ -0.63
XRCC4-205ENST00000511817 DCBLD2Q96PD2 775 aa11.08□□□□□ -0.64
XRCC4-205ENST00000511817 CHADLQ6NUI6 762 aa11.04□□□□□ -0.64
XRCC4-205ENST00000511817 CD44P16070 742 aaKnown RBP11.02□□□□□ -0.64
XRCC4-205ENST00000511817 SLC4A1APQ9BWU0 796 aaKnown RBP10.94□□□□□ -0.66
XRCC4-205ENST00000511817 POTEB2H3BUK9 544 aa10.91□□□□□ -0.66
XRCC4-205ENST00000511817 SSUH2Q9Y2M2 353 aa10.9□□□□□ -0.66
XRCC4-205ENST00000511817 FBLN2P98095 1184 aa10.87□□□□□ -0.67
XRCC4-205ENST00000511817 ZNF579Q8NAF0 562 aaKnown RBP10.87□□□□□ -0.67
XRCC4-205ENST00000511817 PRR29P0C7W0 189 aa10.86□□□□□ -0.67
XRCC4-205ENST00000511817 ATXN8OSP0DMR3 200 aa10.84□□□□□ -0.67
XRCC4-205ENST00000511817 FARP1Q9Y4F1 1045 aaPredicted RBP10.84□□□□□ -0.67
XRCC4-205ENST00000511817 ZNF692Q9BU19 519 aaPredicted RBP10.8□□□□□ -0.68
XRCC4-205ENST00000511817 LCE2DQ5TA82 110 aaPredicted RBP10.77□□□□□ -0.68
XRCC4-205ENST00000511817 ZBTB22O15209 634 aa10.73□□□□□ -0.69
XRCC4-205ENST00000511817 GALR2O43603 387 aaPredicted RBP10.73□□□□□ -0.69
XRCC4-205ENST00000511817 MKRN4PQ13434 485 aaPredicted RBP10.7□□□□□ -0.7
XRCC4-205ENST00000511817 ZRANB1Q9UGI0 708 aa10.69□□□□□ -0.7
XRCC4-205ENST00000511817 MAMSTRQ6ZN01 415 aa10.69□□□□□ -0.7
XRCC4-205ENST00000511817 FAM163AQ96GL9 167 aaPredicted RBP10.64□□□□□ -0.71
XRCC4-205ENST00000511817 PABPN1Q86U42 306 aaKnown RBP eCLIP10.61□□□□□ -0.71
XRCC4-205ENST00000511817 POTEJP0CG39 1038 aa10.59□□□□□ -0.71
XRCC4-205ENST00000511817 PELP1Q8IZL8 1130 aaKnown RBP10.59□□□□□ -0.71
XRCC4-205ENST00000511817 METRNQ9UJH8 293 aa10.58□□□□□ -0.72
XRCC4-205ENST00000511817 CDAN1Q8IWY9 1227 aa10.57□□□□□ -0.72
XRCC4-205ENST00000511817 C7P10643 843 aa10.54□□□□□ -0.72
XRCC4-205ENST00000511817 SLC39A7Q92504 469 aa10.54□□□□□ -0.72
XRCC4-205ENST00000511817 SCUBE2Q9NQ36 999 aa10.54□□□□□ -0.72
XRCC4-205ENST00000511817 ASTLQ6HA08 431 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms