RNA–Protein interactions for RNA: ENST00000636420.1

PCCA-212, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 5

Gene PCCA, Length 1,418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-212ENST00000636420 AEBP2Q6ZN18 517 aaPredicted RBP19.43■□□□□ 0.7
PCCA-212ENST00000636420 CHIC1Q5VXU3 224 aa18.21■□□□□ 0.51
PCCA-212ENST00000636420 NISCHQ9Y2I1 1504 aa18.2■□□□□ 0.5
PCCA-212ENST00000636420 ABCC9O60706 1549 aa17.09■□□□□ 0.33
PCCA-212ENST00000636420 DNAJC5BQ9UF47 199 aa16.62■□□□□ 0.25
PCCA-212ENST00000636420 CCDC180Q9P1Z9 1646 aa16.54■□□□□ 0.24
PCCA-212ENST00000636420 SENP3Q9H4L4 574 aaPredicted RBP16.42■□□□□ 0.22
PCCA-212ENST00000636420 PHF23Q9BUL5 403 aaPredicted RBP16.27■□□□□ 0.19
PCCA-212ENST00000636420 RB1CC1Q8TDY2 1594 aa15.99■□□□□ 0.15
PCCA-212ENST00000636420 PABPN1Q86U42 306 aaKnown RBP eCLIP15.82■□□□□ 0.12
PCCA-212ENST00000636420 NACADO15069 1562 aa15.77■□□□□ 0.11
PCCA-212ENST00000636420 UNC13AQ9UPW8 1703 aa15.66■□□□□ 0.1
PCCA-212ENST00000636420 BICRAQ9NZM4 1560 aa15.66■□□□□ 0.1
PCCA-212ENST00000636420 DNAJC5Q9H3Z4 198 aa15.6■□□□□ 0.09
PCCA-212ENST00000636420 CECR2Q9BXF3 1484 aa15.45■□□□□ 0.06
PCCA-212ENST00000636420 DCAF8L2P0C7V8 631 aa15.45■□□□□ 0.06
PCCA-212ENST00000636420 FOXD1Q16676 465 aa15.43■□□□□ 0.06
PCCA-212ENST00000636420 MYO15BQ96JP2 1530 aa15.41■□□□□ 0.06
PCCA-212ENST00000636420 CC2D2AQ9P2K1 1620 aa15.41■□□□□ 0.06
PCCA-212ENST00000636420 SHROOM4Q9ULL8 1493 aa15.31■□□□□ 0.04
PCCA-212ENST00000636420 EIF4G1Q04637 1599 aaKnown RBP15.25■□□□□ 0.03
PCCA-212ENST00000636420 SCRIBQ14160 1630 aa15.03■□□□□ -0
PCCA-212ENST00000636420 DCAF1Q9Y4B6 1507 aa15.01□□□□□ -0.01
PCCA-212ENST00000636420 ZCCHC6Q5VYS8 1495 aaKnown RBP14.98□□□□□ -0.01
PCCA-212ENST00000636420 CUX2O14529 1486 aa14.95□□□□□ -0.02
PCCA-212ENST00000636420 ERCC6Q03468 1493 aa14.73□□□□□ -0.05
PCCA-212ENST00000636420 NCAPD3P42695 1498 aa14.61□□□□□ -0.07
PCCA-212ENST00000636420 TRIM41Q8WV44 630 aa14.6□□□□□ -0.07
PCCA-212ENST00000636420 NESP48681 1621 aa14.56□□□□□ -0.08
PCCA-212ENST00000636420 THOC2Q8NI27 1593 aaKnown RBP14.52□□□□□ -0.08
PCCA-212ENST00000636420 ATAD2BQ9ULI0 1458 aa14.48□□□□□ -0.09
PCCA-212ENST00000636420 HMGXB3Q12766 1538 aa14.43□□□□□ -0.1
PCCA-212ENST00000636420 PLPPR3Q6T4P5 718 aa14.41□□□□□ -0.1
PCCA-212ENST00000636420 PPP6R1Q9UPN7 881 aa14.4□□□□□ -0.1
PCCA-212ENST00000636420 POTEDQ86YR6 584 aa14.38□□□□□ -0.11
PCCA-212ENST00000636420 MSH5O43196 834 aa14.35□□□□□ -0.11
PCCA-212ENST00000636420 SMARCA2P51531 1590 aa14.35□□□□□ -0.11
PCCA-212ENST00000636420 PIAS4Q8N2W9 510 aaPredicted RBP14.32□□□□□ -0.12
PCCA-212ENST00000636420 LAMC3Q9Y6N6 1575 aa14.31□□□□□ -0.12
PCCA-212ENST00000636420 KIF21AQ7Z4S6 1674 aa14.31□□□□□ -0.12
PCCA-212ENST00000636420 SMARCA4P51532 1647 aa14.31□□□□□ -0.12
PCCA-212ENST00000636420 ADRA2BP18089 450 aa14.3□□□□□ -0.12
PCCA-212ENST00000636420 BAZ1BQ9UIG0 1483 aaKnown RBP14.25□□□□□ -0.13
PCCA-212ENST00000636420 PDS5BQ9NTI5 1447 aa14.23□□□□□ -0.13
PCCA-212ENST00000636420 PEG3Q9GZU2 1588 aa14.2□□□□□ -0.14
PCCA-212ENST00000636420 BAZ1AQ9NRL2 1556 aaPredicted RBP14.2□□□□□ -0.14
PCCA-212ENST00000636420 WDR62O43379 1518 aa14.19□□□□□ -0.14
PCCA-212ENST00000636420 MRC2Q9UBG0 1479 aa14.18□□□□□ -0.14
PCCA-212ENST00000636420 OSCARQ8IYS5 282 aa14.13□□□□□ -0.15
PCCA-212ENST00000636420 CADPSQ9ULU8 1353 aa14.1□□□□□ -0.15
PCCA-212ENST00000636420 RIMBP3CA6NJZ7 1639 aa14.06□□□□□ -0.16
PCCA-212ENST00000636420 RIMBP3BA6NNM3 1639 aa14.06□□□□□ -0.16
PCCA-212ENST00000636420 RIMBP3Q9UFD9 1639 aa14.06□□□□□ -0.16
PCCA-212ENST00000636420 MROH2BQ7Z745 1585 aa14.04□□□□□ -0.16
PCCA-212ENST00000636420 CEP164Q9UPV0 1460 aa13.98□□□□□ -0.17
PCCA-212ENST00000636420 ARHGEF11O15085 1522 aa13.97□□□□□ -0.17
PCCA-212ENST00000636420 FANCD2Q9BXW9 1451 aa13.94□□□□□ -0.18
PCCA-212ENST00000636420 URB2Q14146 1524 aaKnown RBP13.91□□□□□ -0.18
PCCA-212ENST00000636420 CFTRP13569 1480 aa13.85□□□□□ -0.19
PCCA-212ENST00000636420 CYB5RLQ6IPT4 315 aa13.84□□□□□ -0.19
PCCA-212ENST00000636420 ZNF608Q9ULD9 1512 aaPredicted RBP13.82□□□□□ -0.2
PCCA-212ENST00000636420 ARAP1Q96P48 1450 aa13.82□□□□□ -0.2
PCCA-212ENST00000636420 TRHP20396 242 aaPredicted RBP13.81□□□□□ -0.2
PCCA-212ENST00000636420 WIZO95785 1651 aa13.81□□□□□ -0.2
PCCA-212ENST00000636420 IFT140Q96RY7 1462 aa13.74□□□□□ -0.21
PCCA-212ENST00000636420 RSF1Q96T23 1441 aaPredicted RBP13.69□□□□□ -0.22
PCCA-212ENST00000636420 EIF4G3O43432 1585 aaKnown RBP13.68□□□□□ -0.22
PCCA-212ENST00000636420 CHD1O14646 1710 aa13.66□□□□□ -0.22
PCCA-212ENST00000636420 TOPBP1Q92547 1522 aa13.63□□□□□ -0.23
PCCA-212ENST00000636420 AQRO60306 1485 aaKnown RBP eCLIP13.6□□□□□ -0.23
PCCA-212ENST00000636420 TOP2AP11388 1531 aaKnown RBP13.6□□□□□ -0.23
PCCA-212ENST00000636420 PRDM2Q13029 1718 aa13.59□□□□□ -0.23
PCCA-212ENST00000636420 TARBP1Q13395 1621 aaKnown RBP13.58□□□□□ -0.24
PCCA-212ENST00000636420 CLASP1Q7Z460 1538 aa13.56□□□□□ -0.24
PCCA-212ENST00000636420 FBLN2P98095 1184 aa13.51□□□□□ -0.25
PCCA-212ENST00000636420 DNMBPQ6XZF7 1577 aa13.51□□□□□ -0.25
PCCA-212ENST00000636420 ABCC8Q09428 1581 aa13.49□□□□□ -0.25
PCCA-212ENST00000636420 POLA1P09884 1462 aaPredicted RBP13.47□□□□□ -0.25
PCCA-212ENST00000636420 CCDC88BA6NC98 1476 aa13.46□□□□□ -0.26
PCCA-212ENST00000636420 SNAPC4Q5SXM2 1469 aa13.43□□□□□ -0.26
PCCA-212ENST00000636420 RAD54L2Q9Y4B4 1467 aa13.43□□□□□ -0.26
PCCA-212ENST00000636420 TDRD9Q8NDG6 1382 aaKnown RBP13.42□□□□□ -0.26
PCCA-212ENST00000636420 GAPVD1Q14C86 1478 aa13.41□□□□□ -0.26
PCCA-212ENST00000636420 SYNJ1O43426 1573 aa13.41□□□□□ -0.26
PCCA-212ENST00000636420 ILDR1Q86SU0 546 aaPredicted RBP13.39□□□□□ -0.27
PCCA-212ENST00000636420 MAGI1Q96QZ7 1491 aaPredicted RBP13.36□□□□□ -0.27
PCCA-212ENST00000636420 SOGA1O94964 1423 aa13.35□□□□□ -0.27
PCCA-212ENST00000636420 CHMP7Q8WUX9 453 aaPredicted RBP13.34□□□□□ -0.27
PCCA-212ENST00000636420 WDR97A6NE52 1622 aa13.34□□□□□ -0.27
PCCA-212ENST00000636420 SYNJ2O15056 1496 aa13.33□□□□□ -0.27
PCCA-212ENST00000636420 ERCC6L2Q5T890 1561 aa13.32□□□□□ -0.28
PCCA-212ENST00000636420 GRIN2BQ13224 1484 aa13.3□□□□□ -0.28
PCCA-212ENST00000636420 FGD5Q6ZNL6 1462 aa13.29□□□□□ -0.28
PCCA-212ENST00000636420 KIF13AQ9H1H9 1805 aa13.26□□□□□ -0.29
PCCA-212ENST00000636420 KDM4FA0A1W2PPD8 638 aa13.26□□□□□ -0.29
PCCA-212ENST00000636420 HRCP23327 699 aa13.22□□□□□ -0.29
PCCA-212ENST00000636420 CUX1P39880 1505 aa13.21□□□□□ -0.29
PCCA-212ENST00000636420 MAPK8IP2Q13387 824 aaPredicted RBP13.21□□□□□ -0.3
PCCA-212ENST00000636420 CEP170Q5SW79 1584 aa13.2□□□□□ -0.3
PCCA-212ENST00000636420 PBRM1Q86U86 1689 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms