RNA–Protein interactions for RNA: ENST00000548734.1

CDK17-205, Transcript of cyclin dependent kinase 17, humanhuman

TSL 4

Gene CDK17, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK17-205ENST00000548734 AEBP2Q6ZN18 517 aaPredicted RBP25.3■■□□□ 1.64
CDK17-205ENST00000548734 CHIC1Q5VXU3 224 aa23.61■■□□□ 1.37
CDK17-205ENST00000548734 SENP3Q9H4L4 574 aaPredicted RBP21.68■■□□□ 1.06
CDK17-205ENST00000548734 PHF23Q9BUL5 403 aaPredicted RBP21.32■■□□□ 1
CDK17-205ENST00000548734 FOXD1Q16676 465 aa20.34■□□□□ 0.85
CDK17-205ENST00000548734 POTEDQ86YR6 584 aa20.34■□□□□ 0.85
CDK17-205ENST00000548734 MSH5O43196 834 aa19.33■□□□□ 0.68
CDK17-205ENST00000548734 PIAS4Q8N2W9 510 aaPredicted RBP18.82■□□□□ 0.6
CDK17-205ENST00000548734 PLPPR3Q6T4P5 718 aa18.72■□□□□ 0.59
CDK17-205ENST00000548734 PPP6R1Q9UPN7 881 aa18.4■□□□□ 0.54
CDK17-205ENST00000548734 ADRA2BP18089 450 aa18.3■□□□□ 0.52
CDK17-205ENST00000548734 CACNB1Q02641 598 aaPredicted RBP17.17■□□□□ 0.34
CDK17-205ENST00000548734 MAPK8IP2Q13387 824 aaPredicted RBP17.08■□□□□ 0.32
CDK17-205ENST00000548734 DMRT2Q9Y5R5 561 aa17.05■□□□□ 0.32
CDK17-205ENST00000548734 SCAF1Q9H7N4 1312 aaKnown RBP16.74■□□□□ 0.27
CDK17-205ENST00000548734 DCAF8L1A6NGE4 600 aa16.52■□□□□ 0.24
CDK17-205ENST00000548734 PPP4R3CPQ6ZMV5 832 aa16.46■□□□□ 0.23
CDK17-205ENST00000548734 RNF39Q9H2S5 420 aa16.41■□□□□ 0.22
CDK17-205ENST00000548734 KCNA4P22459 653 aa16.19■□□□□ 0.18
CDK17-205ENST00000548734 NCBP3Q53F19 620 aaKnown RBP16.17■□□□□ 0.18
CDK17-205ENST00000548734 C1QBPQ07021 282 aaKnown RBP16.11■□□□□ 0.17
CDK17-205ENST00000548734 HOXD11P31277 338 aaPredicted RBP16.09■□□□□ 0.17
CDK17-205ENST00000548734 CNKSR2Q8WXI2 1034 aa16.02■□□□□ 0.16
CDK17-205ENST00000548734 RNF216Q9NWF9 866 aaPredicted RBP15.87■□□□□ 0.13
CDK17-205ENST00000548734 NPM3O75607 178 aaKnown RBP15.81■□□□□ 0.12
CDK17-205ENST00000548734 POTEHQ6S545 545 aa15.77■□□□□ 0.12
CDK17-205ENST00000548734 DNAJC5BQ9UF47 199 aa15.67■□□□□ 0.1
CDK17-205ENST00000548734 SLC4A1APQ9BWU0 796 aaKnown RBP15.5■□□□□ 0.07
CDK17-205ENST00000548734 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.4■□□□□ 0.066e-6■□□□□ 8.2
CDK17-205ENST00000548734 EHMT2Q96KQ7 1210 aa15.15■□□□□ 0.02
CDK17-205ENST00000548734 DSG3P32926 999 aa15.11■□□□□ 0.01
CDK17-205ENST00000548734 CAPN15O75808 1086 aa15.05■□□□□ -0
CDK17-205ENST00000548734 SPINK5Q9NQ38 1064 aaPredicted RBP15.02■□□□□ -0
CDK17-205ENST00000548734 U3KPZ7 1027 aaPredicted RBP14.94□□□□□ -0.02
CDK17-205ENST00000548734 CSRNP3Q8WYN3 585 aa14.93□□□□□ -0.02
CDK17-205ENST00000548734 FOXD4L1Q9NU39 408 aa14.93□□□□□ -0.02
CDK17-205ENST00000548734 SLC4A2P04920 1241 aa14.87□□□□□ -0.03
CDK17-205ENST00000548734 ZBTB22O15209 634 aa14.85□□□□□ -0.03
CDK17-205ENST00000548734 MYCNP04198 464 aaPredicted RBP14.68□□□□□ -0.06
CDK17-205ENST00000548734 ABCB7O75027 752 aa14.64□□□□□ -0.07
CDK17-205ENST00000548734 TRHP20396 242 aaPredicted RBP14.62□□□□□ -0.07
CDK17-205ENST00000548734 APLP2Q06481 763 aa14.62□□□□□ -0.07
CDK17-205ENST00000548734 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.57□□□□□ -0.08
CDK17-205ENST00000548734 HNRNPUL2Q1KMD3 747 aaKnown RBP14.57□□□□□ -0.08
CDK17-205ENST00000548734 SAMD1Q6SPF0 538 aaPredicted RBP14.49□□□□□ -0.09
CDK17-205ENST00000548734 ZNF219Q9P2Y4 722 aaPredicted RBP14.49□□□□□ -0.09
CDK17-205ENST00000548734 ATXN8OSP0DMR3 200 aa14.46□□□□□ -0.09
CDK17-205ENST00000548734 CHRDL2Q6WN34 429 aa14.46□□□□□ -0.09
CDK17-205ENST00000548734 RBM42Q9BTD8 480 aaKnown RBP14.41□□□□□ -0.1
CDK17-205ENST00000548734 SP7Q8TDD2 431 aaPredicted RBP14.38□□□□□ -0.11
CDK17-205ENST00000548734 ATF5Q9Y2D1 282 aaPredicted RBP14.14□□□□□ -0.15
CDK17-205ENST00000548734 POLA2Q14181 598 aa14.01□□□□□ -0.17
CDK17-205ENST00000548734 HAX1O00165 279 aa13.96□□□□□ -0.17
CDK17-205ENST00000548734 PIP4P2Q8N4L2 257 aa13.95□□□□□ -0.18
CDK17-205ENST00000548734 AKT1S1Q96B36 256 aa13.91□□□□□ -0.18
CDK17-205ENST00000548734 ZBTB12Q9Y330 459 aaPredicted RBP13.83□□□□□ -0.2
CDK17-205ENST00000548734 REM2Q8IYK8 340 aaPredicted RBP13.81□□□□□ -0.2
CDK17-205ENST00000548734 EVX2Q03828 476 aa13.72□□□□□ -0.21
CDK17-205ENST00000548734 FXR2P51116 673 aaKnown RBP eCLIP13.7□□□□□ -0.22
CDK17-205ENST00000548734 FBLN2P98095 1184 aa13.7□□□□□ -0.22
CDK17-205ENST00000548734 PITPNM1O00562 1244 aa13.68□□□□□ -0.22
CDK17-205ENST00000548734 OSCARQ8IYS5 282 aa13.58□□□□□ -0.24
CDK17-205ENST00000548734 MKRN4PQ13434 485 aaPredicted RBP13.56□□□□□ -0.24
CDK17-205ENST00000548734 FKBP8Q14318 412 aa13.51□□□□□ -0.25
CDK17-205ENST00000548734 LHX8Q68G74 356 aa13.51□□□□□ -0.25
CDK17-205ENST00000548734 PLSCR2Q9NRY7 297 aa13.41□□□□□ -0.26
CDK17-205ENST00000548734 SPDYE4A6NLX3 237 aa13.4□□□□□ -0.26
CDK17-205ENST00000548734 GABBR2O75899 941 aa13.34□□□□□ -0.27
CDK17-205ENST00000548734 SPDYE2BA6NHP3 402 aa13.33□□□□□ -0.28
CDK17-205ENST00000548734 SPDYE6P0CI01 402 aa13.33□□□□□ -0.28
CDK17-205ENST00000548734 PRKAR2AP13861 404 aaKnown RBP13.33□□□□□ -0.28
CDK17-205ENST00000548734 SPDYE2Q495Y8 402 aa13.33□□□□□ -0.28
CDK17-205ENST00000548734 C19orf67A6NJJ6 358 aa13.3□□□□□ -0.28
CDK17-205ENST00000548734 ZNF692Q9BU19 519 aaPredicted RBP13.27□□□□□ -0.29
CDK17-205ENST00000548734 CLEC11AQ9Y240 323 aa13.21□□□□□ -0.29
CDK17-205ENST00000548734 PROM2Q8N271 834 aa13.19□□□□□ -0.3
CDK17-205ENST00000548734 SSUH2Q9Y2M2 353 aa13.19□□□□□ -0.3
CDK17-205ENST00000548734 SPDYE1Q8NFV5 336 aaPredicted RBP13.14□□□□□ -0.31
CDK17-205ENST00000548734 FBXO3Q9UK99 471 aa13.11□□□□□ -0.31
CDK17-205ENST00000548734 PABPN1Q86U42 306 aaKnown RBP eCLIP13.07□□□□□ -0.32
CDK17-205ENST00000548734 POTEIP0CG38 1075 aa13.05□□□□□ -0.32
CDK17-205ENST00000548734 CHADLQ6NUI6 762 aa13.03□□□□□ -0.32
CDK17-205ENST00000548734 STAG3Q9UJ98 1225 aa12.98□□□□□ -0.33
CDK17-205ENST00000548734 CD44P16070 742 aaKnown RBP12.85□□□□□ -0.35
CDK17-205ENST00000548734 PRR29P0C7W0 189 aa12.84□□□□□ -0.35
CDK17-205ENST00000548734 VASPP50552 380 aaPredicted RBP12.84□□□□□ -0.35
CDK17-205ENST00000548734 DCBLD2Q96PD2 775 aa12.82□□□□□ -0.36
CDK17-205ENST00000548734 POTEMA6NI47 508 aa12.77□□□□□ -0.37
CDK17-205ENST00000548734 CLCN6P51797 869 aa12.75□□□□□ -0.37
CDK17-205ENST00000548734 PLEKHG5O94827 1062 aa12.74□□□□□ -0.37
CDK17-205ENST00000548734 OTUD5Q96G74 571 aa12.72□□□□□ -0.37
CDK17-205ENST00000548734 PLCD3Q8N3E9 789 aa12.71□□□□□ -0.37
CDK17-205ENST00000548734 FARP1Q9Y4F1 1045 aaPredicted RBP12.71□□□□□ -0.37
CDK17-205ENST00000548734 MIER1Q8N108 512 aa12.7□□□□□ -0.38
CDK17-205ENST00000548734 POTEGQ6S5H5 508 aa12.69□□□□□ -0.38
CDK17-205ENST00000548734 ZBTB47Q9UFB7 747 aaPredicted RBP12.65□□□□□ -0.38
CDK17-205ENST00000548734 AMER1Q5JTC6 1135 aaPredicted RBP12.64□□□□□ -0.39
CDK17-205ENST00000548734 IFNLR1Q8IU57 520 aaPredicted RBP12.64□□□□□ -0.39
CDK17-205ENST00000548734 POTEB2H3BUK9 544 aa12.62□□□□□ -0.39
CDK17-205ENST00000548734 KLHL34Q8N239 644 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms