RNA–Protein interactions for RNA: ENST00000452935.6

ATL2-210, Transcript of atlastin GTPase 2, humanhuman

TSL 2 BASIC

Gene ATL2, Length 2,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL2-210ENST00000452935 NISCHQ9Y2I1 1504 aa32.08■■■□□ 2.73
ATL2-210ENST00000452935 CCDC180Q9P1Z9 1646 aa27.69■■■□□ 2.02
ATL2-210ENST00000452935 ZCCHC6Q5VYS8 1495 aaKnown RBP27.03■■□□□ 1.92
ATL2-210ENST00000452935 SHROOM4Q9ULL8 1493 aa26.59■■□□□ 1.85
ATL2-210ENST00000452935 DCAF1Q9Y4B6 1507 aa26.44■■□□□ 1.82
ATL2-210ENST00000452935 DCAF8L2P0C7V8 631 aa26.41■■□□□ 1.82
ATL2-210ENST00000452935 ABCC9O60706 1549 aa25.98■■□□□ 1.75
ATL2-210ENST00000452935 MYO15BQ96JP2 1530 aa25.95■■□□□ 1.74
ATL2-210ENST00000452935 SUPT5HO00267 1087 aaKnown RBP25.73■■□□□ 1.71
ATL2-210ENST00000452935 NACADO15069 1562 aa25.7■■□□□ 1.7
ATL2-210ENST00000452935 SCRIBQ14160 1630 aa25.66■■□□□ 1.7
ATL2-210ENST00000452935 RB1CC1Q8TDY2 1594 aa25.38■■□□□ 1.65
ATL2-210ENST00000452935 RSF1Q96T23 1441 aaPredicted RBP25.09■■□□□ 1.61
ATL2-210ENST00000452935 UNC13AQ9UPW8 1703 aa25.07■■□□□ 1.6
ATL2-210ENST00000452935 CECR2Q9BXF3 1484 aa25.01■■□□□ 1.59
ATL2-210ENST00000452935 MROH2BQ7Z745 1585 aa24.88■■□□□ 1.57
ATL2-210ENST00000452935 CHIC1Q5VXU3 224 aa24.86■■□□□ 1.57
ATL2-210ENST00000452935 BICRAQ9NZM4 1560 aa24.77■■□□□ 1.56
ATL2-210ENST00000452935 WIZO95785 1651 aa24.71■■□□□ 1.55
ATL2-210ENST00000452935 BAZ1AQ9NRL2 1556 aaPredicted RBP24.68■■□□□ 1.54
ATL2-210ENST00000452935 PABPN1Q86U42 306 aaKnown RBP eCLIP24.63■■□□□ 1.53
ATL2-210ENST00000452935 SMARCA4P51532 1647 aa24.58■■□□□ 1.53
ATL2-210ENST00000452935 TOP2AP11388 1531 aaKnown RBP24.35■■□□□ 1.49
ATL2-210ENST00000452935 PEG3Q9GZU2 1588 aa24.23■■□□□ 1.47
ATL2-210ENST00000452935 EIF4G1Q04637 1599 aaKnown RBP24.21■■□□□ 1.47
ATL2-210ENST00000452935 SMARCA2P51531 1590 aa24.2■■□□□ 1.46
ATL2-210ENST00000452935 CCDC88BA6NC98 1476 aa24.18■■□□□ 1.46
ATL2-210ENST00000452935 ATAD2BQ9ULI0 1458 aa24.08■■□□□ 1.45
ATL2-210ENST00000452935 TRIM41Q8WV44 630 aa24.08■■□□□ 1.44
ATL2-210ENST00000452935 LOC105371045A0A1W2PR82 267 aa24■■□□□ 1.43
ATL2-210ENST00000452935 BAZ1BQ9UIG0 1483 aaKnown RBP23.92■■□□□ 1.42
ATL2-210ENST00000452935 ABCC8Q09428 1581 aa23.86■■□□□ 1.41
ATL2-210ENST00000452935 NCAPD3P42695 1498 aa23.77■■□□□ 1.39
ATL2-210ENST00000452935 FAM9AQ8IZU1 332 aaPredicted RBP23.76■■□□□ 1.39
ATL2-210ENST00000452935 HMGXB3Q12766 1538 aa23.74■■□□□ 1.39
ATL2-210ENST00000452935 WRNQ14191 1432 aaPredicted RBP eCLIP23.54■■□□□ 1.36
ATL2-210ENST00000452935 SYNJ1O43426 1573 aa23.51■■□□□ 1.35
ATL2-210ENST00000452935 CC2D2AQ9P2K1 1620 aa23.49■■□□□ 1.35
ATL2-210ENST00000452935 SOGA1O94964 1423 aa23.49■■□□□ 1.35
ATL2-210ENST00000452935 EHMT2Q96KQ7 1210 aa23.48■■□□□ 1.35
ATL2-210ENST00000452935 RUSC2Q8N2Y8 1516 aa23.43■■□□□ 1.34
ATL2-210ENST00000452935 CFTRP13569 1480 aa23.38■■□□□ 1.33
ATL2-210ENST00000452935 TOP2BQ02880 1626 aa23.31■■□□□ 1.32
ATL2-210ENST00000452935 EEA1Q15075 1411 aa23.31■■□□□ 1.32
ATL2-210ENST00000452935 BIVM-ERCC5R4GMW8 1640 aa23.28■■□□□ 1.32
ATL2-210ENST00000452935 CSRNP3Q8WYN3 585 aa23.26■■□□□ 1.31
ATL2-210ENST00000452935 PRDM2Q13029 1718 aa23.25■■□□□ 1.31
ATL2-210ENST00000452935 PCGF6Q9BYE7 350 aa23.25■■□□□ 1.31
ATL2-210ENST00000452935 CUX1P39880 1505 aa23.22■■□□□ 1.31
ATL2-210ENST00000452935 CADPSQ9ULU8 1353 aa23.19■■□□□ 1.3
ATL2-210ENST00000452935 TNIKQ9UKE5 1360 aa23.11■■□□□ 1.29
ATL2-210ENST00000452935 GOLGA3Q08378 1498 aa23.08■■□□□ 1.29
ATL2-210ENST00000452935 KIF21BO75037 1637 aa23.08■■□□□ 1.28
ATL2-210ENST00000452935 CEP162Q5TB80 1403 aa23.06■■□□□ 1.28
ATL2-210ENST00000452935 TRIM26Q12899 539 aaPredicted RBP23.05■■□□□ 1.28
ATL2-210ENST00000452935 CEP164Q9UPV0 1460 aa23.04■■□□□ 1.28
ATL2-210ENST00000452935 DNAJC5BQ9UF47 199 aa23.01■■□□□ 1.27
ATL2-210ENST00000452935 UBTFP17480 764 aaKnown RBP22.99■■□□□ 1.27
ATL2-210ENST00000452935 NESP48681 1621 aa22.99■■□□□ 1.27
ATL2-210ENST00000452935 RAPGEF2Q9Y4G8 1499 aa22.96■■□□□ 1.27
ATL2-210ENST00000452935 FANCD2Q9BXW9 1451 aa22.95■■□□□ 1.27
ATL2-210ENST00000452935 PRXQ9BXM0 1461 aa22.89■■□□□ 1.26
ATL2-210ENST00000452935 HRCP23327 699 aa22.87■■□□□ 1.25
ATL2-210ENST00000452935 KIF27Q86VH2 1401 aa22.87■■□□□ 1.25
ATL2-210ENST00000452935 FGD5Q6ZNL6 1462 aa22.86■■□□□ 1.25
ATL2-210ENST00000452935 LAMC3Q9Y6N6 1575 aa22.85■■□□□ 1.25
ATL2-210ENST00000452935 PPARGC1BQ86YN6 1023 aaKnown RBP22.85■■□□□ 1.25
ATL2-210ENST00000452935 ERICH3Q5RHP9 1530 aa22.82■■□□□ 1.24
ATL2-210ENST00000452935 DNMBPQ6XZF7 1577 aa22.79■■□□□ 1.24
ATL2-210ENST00000452935 CUX2O14529 1486 aa22.78■■□□□ 1.24
ATL2-210ENST00000452935 TOPBP1Q92547 1522 aa22.77■■□□□ 1.24
ATL2-210ENST00000452935 CLIP1P30622 1438 aa22.76■■□□□ 1.23
ATL2-210ENST00000452935 IGF1RP08069 1367 aa22.72■■□□□ 1.23
ATL2-210ENST00000452935 POLA1P09884 1462 aaPredicted RBP22.71■■□□□ 1.23
ATL2-210ENST00000452935 URB2Q14146 1524 aaKnown RBP22.7■■□□□ 1.22
ATL2-210ENST00000452935 RAD54L2Q9Y4B4 1467 aa22.69■■□□□ 1.22
ATL2-210ENST00000452935 KIF21AQ7Z4S6 1674 aa22.66■■□□□ 1.22
ATL2-210ENST00000452935 PDS5BQ9NTI5 1447 aa22.64■■□□□ 1.22
ATL2-210ENST00000452935 ABCA10Q8WWZ4 1543 aa22.64■■□□□ 1.21
ATL2-210ENST00000452935 VPS8Q8N3P4 1428 aa22.61■■□□□ 1.21
ATL2-210ENST00000452935 RANGAP1P46060 587 aaPredicted RBP22.6■■□□□ 1.21
ATL2-210ENST00000452935 CARMIL1Q5VZK9 1371 aa22.57■■□□□ 1.2
ATL2-210ENST00000452935 WDR97A6NE52 1622 aa22.57■■□□□ 1.2
ATL2-210ENST00000452935 TTBK1Q5TCY1 1321 aaPredicted RBP22.56■■□□□ 1.2
ATL2-210ENST00000452935 ARAP1Q96P48 1450 aa22.55■■□□□ 1.2
ATL2-210ENST00000452935 ARHGAP35Q9NRY4 1499 aa22.46■■□□□ 1.19
ATL2-210ENST00000452935 ABCA5Q8WWZ7 1642 aa22.45■■□□□ 1.18
ATL2-210ENST00000452935 TARBP1Q13395 1621 aaKnown RBP22.42■■□□□ 1.18
ATL2-210ENST00000452935 TDRD9Q8NDG6 1382 aaKnown RBP22.41■■□□□ 1.18
ATL2-210ENST00000452935 CUL7Q14999 1698 aa22.4■■□□□ 1.18
ATL2-210ENST00000452935 MRC2Q9UBG0 1479 aa22.37■■□□□ 1.17
ATL2-210ENST00000452935 GAPVD1Q14C86 1478 aa22.35■■□□□ 1.17
ATL2-210ENST00000452935 APLP2Q06481 763 aa22.28■■□□□ 1.16
ATL2-210ENST00000452935 CTTNBP2Q8WZ74 1663 aa22.26■■□□□ 1.15
ATL2-210ENST00000452935 WDR62O43379 1518 aa22.26■■□□□ 1.15
ATL2-210ENST00000452935 KANK4Q5T7N3 995 aaPredicted RBP22.25■■□□□ 1.15
ATL2-210ENST00000452935 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.22■■□□□ 1.15
ATL2-210ENST00000452935 PBRM1Q86U86 1689 aa22.22■■□□□ 1.15
ATL2-210ENST00000452935 ZEB1P37275 1124 aaPredicted RBP22.21■■□□□ 1.15
ATL2-210ENST00000452935 AQRO60306 1485 aaKnown RBP eCLIP22.2■■□□□ 1.154e-7■■■■□ 20.4
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms