RNA–Protein interactions for RNA: ENST00000497567.1

ATP13A3-210, Transcript of ATPase 13A3, humanhuman

TSL 4

Gene ATP13A3, Length 532 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-210ENST00000497567 AEBP2Q6ZN18 517 aaPredicted RBP32.06■■■□□ 2.72
ATP13A3-210ENST00000497567 CHIC1Q5VXU3 224 aa31.31■■■□□ 2.6
ATP13A3-210ENST00000497567 PHF23Q9BUL5 403 aaPredicted RBP27.63■■■□□ 2.01
ATP13A3-210ENST00000497567 SENP3Q9H4L4 574 aaPredicted RBP27.07■■□□□ 1.92
ATP13A3-210ENST00000497567 PLPPR3Q6T4P5 718 aa25.42■■□□□ 1.66
ATP13A3-210ENST00000497567 FOXD1Q16676 465 aa25.19■■□□□ 1.62
ATP13A3-210ENST00000497567 PPP6R1Q9UPN7 881 aa24.36■■□□□ 1.49
ATP13A3-210ENST00000497567 ADRA2BP18089 450 aa24.33■■□□□ 1.49
ATP13A3-210ENST00000497567 PIAS4Q8N2W9 510 aaPredicted RBP23.74■■□□□ 1.39
ATP13A3-210ENST00000497567 MSH5O43196 834 aa23.09■■□□□ 1.29
ATP13A3-210ENST00000497567 PPP4R3CPQ6ZMV5 832 aa22.46■■□□□ 1.19
ATP13A3-210ENST00000497567 SCAF1Q9H7N4 1312 aaKnown RBP22.1■■□□□ 1.13
ATP13A3-210ENST00000497567 KCNA4P22459 653 aa22.08■■□□□ 1.13
ATP13A3-210ENST00000497567 MAPK8IP2Q13387 824 aaPredicted RBP22.07■■□□□ 1.12
ATP13A3-210ENST00000497567 NCBP3Q53F19 620 aaKnown RBP21.82■■□□□ 1.08
ATP13A3-210ENST00000497567 CNKSR2Q8WXI2 1034 aa21.77■■□□□ 1.08
ATP13A3-210ENST00000497567 DMRT2Q9Y5R5 561 aa21.65■■□□□ 1.06
ATP13A3-210ENST00000497567 NPM3O75607 178 aaKnown RBP21.6■■□□□ 1.05
ATP13A3-210ENST00000497567 RNF216Q9NWF9 866 aaPredicted RBP21.32■■□□□ 1
ATP13A3-210ENST00000497567 HOXD11P31277 338 aaPredicted RBP21.23■□□□□ 0.99
ATP13A3-210ENST00000497567 SLC4A1APQ9BWU0 796 aaKnown RBP21■□□□□ 0.95
ATP13A3-210ENST00000497567 POTEDQ86YR6 584 aa20.97■□□□□ 0.95
ATP13A3-210ENST00000497567 DNAJC5BQ9UF47 199 aa20.87■□□□□ 0.93
ATP13A3-210ENST00000497567 DCAF8L1A6NGE4 600 aa20.73■□□□□ 0.91
ATP13A3-210ENST00000497567 EHMT2Q96KQ7 1210 aa20.55■□□□□ 0.88
ATP13A3-210ENST00000497567 SLC4A2P04920 1241 aa20.4■□□□□ 0.86
ATP13A3-210ENST00000497567 ZBTB22O15209 634 aa20.36■□□□□ 0.85
ATP13A3-210ENST00000497567 CSRNP3Q8WYN3 585 aa20.28■□□□□ 0.84
ATP13A3-210ENST00000497567 FOXD4L1Q9NU39 408 aa20.24■□□□□ 0.83
ATP13A3-210ENST00000497567 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.23■□□□□ 0.83
ATP13A3-210ENST00000497567 U3KPZ7 1027 aaPredicted RBP19.96■□□□□ 0.79
ATP13A3-210ENST00000497567 MYCNP04198 464 aaPredicted RBP19.89■□□□□ 0.77
ATP13A3-210ENST00000497567 RNF39Q9H2S5 420 aa19.86■□□□□ 0.77
ATP13A3-210ENST00000497567 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.6■□□□□ 0.73
ATP13A3-210ENST00000497567 HNRNPUL2Q1KMD3 747 aaKnown RBP19.6■□□□□ 0.73
ATP13A3-210ENST00000497567 C1QBPQ07021 282 aaKnown RBP19.57■□□□□ 0.72
ATP13A3-210ENST00000497567 SAMD1Q6SPF0 538 aaPredicted RBP19.57■□□□□ 0.72
ATP13A3-210ENST00000497567 ATXN8OSP0DMR3 200 aa19.47■□□□□ 0.71
ATP13A3-210ENST00000497567 ATF5Q9Y2D1 282 aaPredicted RBP19.47■□□□□ 0.71
ATP13A3-210ENST00000497567 SPINK5Q9NQ38 1064 aaPredicted RBP19.41■□□□□ 0.7
ATP13A3-210ENST00000497567 APLP2Q06481 763 aa19.35■□□□□ 0.69
ATP13A3-210ENST00000497567 CAPN15O75808 1086 aa19.27■□□□□ 0.68
ATP13A3-210ENST00000497567 CACNB1Q02641 598 aaPredicted RBP19.27■□□□□ 0.68
ATP13A3-210ENST00000497567 TRHP20396 242 aaPredicted RBP19.22■□□□□ 0.67
ATP13A3-210ENST00000497567 ZNF219Q9P2Y4 722 aaPredicted RBP19.14■□□□□ 0.65
ATP13A3-210ENST00000497567 ABCB7O75027 752 aa18.95■□□□□ 0.62
ATP13A3-210ENST00000497567 DSG3P32926 999 aa18.94■□□□□ 0.62
ATP13A3-210ENST00000497567 POLA2Q14181 598 aa18.91■□□□□ 0.62
ATP13A3-210ENST00000497567 MKRN4PQ13434 485 aaPredicted RBP18.61■□□□□ 0.57
ATP13A3-210ENST00000497567 FBLN2P98095 1184 aa18.51■□□□□ 0.55
ATP13A3-210ENST00000497567 ZBTB12Q9Y330 459 aaPredicted RBP18.5■□□□□ 0.55
ATP13A3-210ENST00000497567 FKBP8Q14318 412 aa18.3■□□□□ 0.52
ATP13A3-210ENST00000497567 OSCARQ8IYS5 282 aa18.29■□□□□ 0.52
ATP13A3-210ENST00000497567 SPDYE4A6NLX3 237 aa18.17■□□□□ 0.5
ATP13A3-210ENST00000497567 SPDYE2BA6NHP3 402 aa18.06■□□□□ 0.48
ATP13A3-210ENST00000497567 SPDYE6P0CI01 402 aa18.06■□□□□ 0.48
ATP13A3-210ENST00000497567 SPDYE2Q495Y8 402 aa18.06■□□□□ 0.48
ATP13A3-210ENST00000497567 ZNF692Q9BU19 519 aaPredicted RBP18.04■□□□□ 0.48
ATP13A3-210ENST00000497567 SSUH2Q9Y2M2 353 aa17.97■□□□□ 0.47
ATP13A3-210ENST00000497567 RBM42Q9BTD8 480 aaKnown RBP17.95■□□□□ 0.46
ATP13A3-210ENST00000497567 PROM2Q8N271 834 aa17.89■□□□□ 0.45
ATP13A3-210ENST00000497567 PABPN1Q86U42 306 aaKnown RBP eCLIP17.82■□□□□ 0.44
ATP13A3-210ENST00000497567 AKT1S1Q96B36 256 aa17.79■□□□□ 0.44
ATP13A3-210ENST00000497567 REM2Q8IYK8 340 aaPredicted RBP17.66■□□□□ 0.42
ATP13A3-210ENST00000497567 FBXO3Q9UK99 471 aa17.52■□□□□ 0.4
ATP13A3-210ENST00000497567 SPDYE1Q8NFV5 336 aaPredicted RBP17.51■□□□□ 0.39
ATP13A3-210ENST00000497567 CLEC11AQ9Y240 323 aa17.48■□□□□ 0.39
ATP13A3-210ENST00000497567 PITPNM1O00562 1244 aa17.47■□□□□ 0.39
ATP13A3-210ENST00000497567 STAG3Q9UJ98 1225 aa17.46■□□□□ 0.39
ATP13A3-210ENST00000497567 VASPP50552 380 aaPredicted RBP17.36■□□□□ 0.37
ATP13A3-210ENST00000497567 PRR29P0C7W0 189 aa17.3■□□□□ 0.36
ATP13A3-210ENST00000497567 CHRDL2Q6WN34 429 aa17.23■□□□□ 0.35
ATP13A3-210ENST00000497567 MIER1Q8N108 512 aa17.21■□□□□ 0.35
ATP13A3-210ENST00000497567 PLCD3Q8N3E9 789 aa17.19■□□□□ 0.34
ATP13A3-210ENST00000497567 IFNLR1Q8IU57 520 aaPredicted RBP17.17■□□□□ 0.34
ATP13A3-210ENST00000497567 CREBZFQ9NS37 354 aa17.16■□□□□ 0.34
ATP13A3-210ENST00000497567 FXR2P51116 673 aaKnown RBP eCLIP17.11■□□□□ 0.33
ATP13A3-210ENST00000497567 CHADLQ6NUI6 762 aa17.09■□□□□ 0.33
ATP13A3-210ENST00000497567 PIP4P2Q8N4L2 257 aa17.07■□□□□ 0.32
ATP13A3-210ENST00000497567 KLHL34Q8N239 644 aa17.03■□□□□ 0.32
ATP13A3-210ENST00000497567 PLEKHG5O94827 1062 aa17.02■□□□□ 0.32
ATP13A3-210ENST00000497567 PRKAR2AP13861 404 aaKnown RBP17.02■□□□□ 0.32
ATP13A3-210ENST00000497567 MNX1P50219 401 aaPredicted RBP17■□□□□ 0.31
ATP13A3-210ENST00000497567 ZBTB47Q9UFB7 747 aaPredicted RBP16.91■□□□□ 0.3
ATP13A3-210ENST00000497567 SPOCK2Q92563 424 aa16.89■□□□□ 0.29
ATP13A3-210ENST00000497567 FARP1Q9Y4F1 1045 aaPredicted RBP16.89■□□□□ 0.29
ATP13A3-210ENST00000497567 RTN4Q9NQC3 1192 aaKnown RBP16.82■□□□□ 0.28
ATP13A3-210ENST00000497567 NUBP1P53384 320 aa16.81■□□□□ 0.28
ATP13A3-210ENST00000497567 NPM1P06748 294 aaKnown RBP eCLIP16.78■□□□□ 0.28
ATP13A3-210ENST00000497567 AMER1Q5JTC6 1135 aaPredicted RBP16.76■□□□□ 0.27
ATP13A3-210ENST00000497567 RASEFQ8IZ41 740 aa16.73■□□□□ 0.27
ATP13A3-210ENST00000497567 PKD2Q13563 968 aa16.64■□□□□ 0.25
ATP13A3-210ENST00000497567 CIZ1Q9ULV3 898 aaPredicted RBP16.64■□□□□ 0.25
ATP13A3-210ENST00000497567 DCAF8Q5TAQ9 597 aa16.62■□□□□ 0.25
ATP13A3-210ENST00000497567 POTEHQ6S545 545 aa16.6■□□□□ 0.25
ATP13A3-210ENST00000497567 TSPYL2Q9H2G4 693 aaPredicted RBP16.6■□□□□ 0.25
ATP13A3-210ENST00000497567 FAM212AQ96EL1 285 aa16.59■□□□□ 0.25
ATP13A3-210ENST00000497567 GSE1Q14687 1217 aa16.56■□□□□ 0.24
ATP13A3-210ENST00000497567 C19orf67A6NJJ6 358 aa16.53■□□□□ 0.24
ATP13A3-210ENST00000497567 CD44P16070 742 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms