RNA–Protein interactions for RNA: ENST00000467644.5

CMC1-206, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 549 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-206ENST00000467644 AEBP2Q6ZN18 517 aaPredicted RBP23.07■■□□□ 1.28
CMC1-206ENST00000467644 CHIC1Q5VXU3 224 aa22.2■■□□□ 1.14
CMC1-206ENST00000467644 SENP3Q9H4L4 574 aaPredicted RBP19.58■□□□□ 0.72
CMC1-206ENST00000467644 PHF23Q9BUL5 403 aaPredicted RBP19.51■□□□□ 0.71
CMC1-206ENST00000467644 FOXD1Q16676 465 aa18.24■□□□□ 0.51
CMC1-206ENST00000467644 PLPPR3Q6T4P5 718 aa17.87■□□□□ 0.45
CMC1-206ENST00000467644 PPP6R1Q9UPN7 881 aa17.31■□□□□ 0.36
CMC1-206ENST00000467644 ADRA2BP18089 450 aa17.27■□□□□ 0.36
CMC1-206ENST00000467644 PIAS4Q8N2W9 510 aaPredicted RBP17.11■□□□□ 0.33
CMC1-206ENST00000467644 MSH5O43196 834 aa16.92■□□□□ 0.3
CMC1-206ENST00000467644 POTEDQ86YR6 584 aa15.98■□□□□ 0.15
CMC1-206ENST00000467644 MAPK8IP2Q13387 824 aaPredicted RBP15.77■□□□□ 0.12
CMC1-206ENST00000467644 SCAF1Q9H7N4 1312 aaKnown RBP15.76■□□□□ 0.11
CMC1-206ENST00000467644 PPP4R3CPQ6ZMV5 832 aa15.72■□□□□ 0.11
CMC1-206ENST00000467644 DMRT2Q9Y5R5 561 aa15.6■□□□□ 0.09
CMC1-206ENST00000467644 CNKSR2Q8WXI2 1034 aa15.34■□□□□ 0.05
CMC1-206ENST00000467644 NCBP3Q53F19 620 aaKnown RBP15.19■□□□□ 0.02
CMC1-206ENST00000467644 HOXD11P31277 338 aaPredicted RBP15.16■□□□□ 0.02
CMC1-206ENST00000467644 RNF216Q9NWF9 866 aaPredicted RBP15.13■□□□□ 0.01
CMC1-206ENST00000467644 KCNA4P22459 653 aa15.01□□□□□ -0.01
CMC1-206ENST00000467644 NPM3O75607 178 aaKnown RBP15□□□□□ -0.01
CMC1-206ENST00000467644 DCAF8L1A6NGE4 600 aa14.92□□□□□ -0.02
CMC1-206ENST00000467644 DNAJC5BQ9UF47 199 aa14.61□□□□□ -0.07
CMC1-206ENST00000467644 RNF39Q9H2S5 420 aa14.49□□□□□ -0.09
CMC1-206ENST00000467644 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.42□□□□□ -0.11e-6■■■□□ 18.6
CMC1-206ENST00000467644 CACNB1Q02641 598 aaPredicted RBP14.32□□□□□ -0.12
CMC1-206ENST00000467644 C1QBPQ07021 282 aaKnown RBP14.27□□□□□ -0.13
CMC1-206ENST00000467644 SLC4A2P04920 1241 aa14.25□□□□□ -0.13
CMC1-206ENST00000467644 SLC4A1APQ9BWU0 796 aaKnown RBP14.22□□□□□ -0.13
CMC1-206ENST00000467644 U3KPZ7 1027 aaPredicted RBP14.18□□□□□ -0.14
CMC1-206ENST00000467644 FOXD4L1Q9NU39 408 aa13.89□□□□□ -0.19
CMC1-206ENST00000467644 SPINK5Q9NQ38 1064 aaPredicted RBP13.88□□□□□ -0.19
CMC1-206ENST00000467644 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.85□□□□□ -0.19
CMC1-206ENST00000467644 MYCNP04198 464 aaPredicted RBP13.85□□□□□ -0.19
CMC1-206ENST00000467644 HNRNPUL2Q1KMD3 747 aaKnown RBP13.85□□□□□ -0.19
CMC1-206ENST00000467644 ZBTB22O15209 634 aa13.83□□□□□ -0.2
CMC1-206ENST00000467644 CAPN15O75808 1086 aa13.82□□□□□ -0.2
CMC1-206ENST00000467644 SAMD1Q6SPF0 538 aaPredicted RBP13.8□□□□□ -0.2
CMC1-206ENST00000467644 APLP2Q06481 763 aa13.78□□□□□ -0.2
CMC1-206ENST00000467644 TRHP20396 242 aaPredicted RBP13.67□□□□□ -0.22
CMC1-206ENST00000467644 DSG3P32926 999 aa13.67□□□□□ -0.22
CMC1-206ENST00000467644 ZNF219Q9P2Y4 722 aaPredicted RBP13.66□□□□□ -0.22
CMC1-206ENST00000467644 ABCB7O75027 752 aa13.54□□□□□ -0.24
CMC1-206ENST00000467644 ATF5Q9Y2D1 282 aaPredicted RBP13.54□□□□□ -0.24
CMC1-206ENST00000467644 CSRNP3Q8WYN3 585 aa13.46□□□□□ -0.25
CMC1-206ENST00000467644 EHMT2Q96KQ7 1210 aa13.46□□□□□ -0.25
CMC1-206ENST00000467644 ATXN8OSP0DMR3 200 aa13.43□□□□□ -0.26
CMC1-206ENST00000467644 POLA2Q14181 598 aa13.39□□□□□ -0.27
CMC1-206ENST00000467644 ZBTB12Q9Y330 459 aaPredicted RBP13.13□□□□□ -0.31
CMC1-206ENST00000467644 RBM42Q9BTD8 480 aaKnown RBP13.01□□□□□ -0.33
CMC1-206ENST00000467644 OSCARQ8IYS5 282 aa12.96□□□□□ -0.33
CMC1-206ENST00000467644 FBLN2P98095 1184 aa12.94□□□□□ -0.34
CMC1-206ENST00000467644 MKRN4PQ13434 485 aaPredicted RBP12.93□□□□□ -0.34
CMC1-206ENST00000467644 AKT1S1Q96B36 256 aa12.79□□□□□ -0.36
CMC1-206ENST00000467644 SPDYE2BA6NHP3 402 aa12.75□□□□□ -0.37
CMC1-206ENST00000467644 SPDYE6P0CI01 402 aa12.75□□□□□ -0.37
CMC1-206ENST00000467644 SPDYE2Q495Y8 402 aa12.75□□□□□ -0.37
CMC1-206ENST00000467644 REM2Q8IYK8 340 aaPredicted RBP12.68□□□□□ -0.38
CMC1-206ENST00000467644 ZNF692Q9BU19 519 aaPredicted RBP12.66□□□□□ -0.38
CMC1-206ENST00000467644 SSUH2Q9Y2M2 353 aa12.64□□□□□ -0.39
CMC1-206ENST00000467644 CHRDL2Q6WN34 429 aa12.62□□□□□ -0.39
CMC1-206ENST00000467644 POTEHQ6S545 545 aa12.58□□□□□ -0.4
CMC1-206ENST00000467644 PITPNM1O00562 1244 aa12.56□□□□□ -0.4
CMC1-206ENST00000467644 PABPN1Q86U42 306 aaKnown RBP eCLIP12.49□□□□□ -0.41
CMC1-206ENST00000467644 SPDYE4A6NLX3 237 aa12.47□□□□□ -0.41
CMC1-206ENST00000467644 SPDYE1Q8NFV5 336 aaPredicted RBP12.45□□□□□ -0.42
CMC1-206ENST00000467644 CLEC11AQ9Y240 323 aa12.41□□□□□ -0.42
CMC1-206ENST00000467644 PIP4P2Q8N4L2 257 aa12.4□□□□□ -0.42
CMC1-206ENST00000467644 FXR2P51116 673 aaKnown RBP eCLIP12.37□□□□□ -0.43
CMC1-206ENST00000467644 PRR29P0C7W0 189 aa12.25□□□□□ -0.45
CMC1-206ENST00000467644 PROM2Q8N271 834 aa12.24□□□□□ -0.45
CMC1-206ENST00000467644 PRKAR2AP13861 404 aaKnown RBP12.22□□□□□ -0.45
CMC1-206ENST00000467644 STAG3Q9UJ98 1225 aa12.19□□□□□ -0.46
CMC1-206ENST00000467644 FKBP8Q14318 412 aa12.18□□□□□ -0.46
CMC1-206ENST00000467644 CHADLQ6NUI6 762 aa12.17□□□□□ -0.46
CMC1-206ENST00000467644 HAX1O00165 279 aa12.06□□□□□ -0.48
CMC1-206ENST00000467644 CREBZFQ9NS37 354 aa12.05□□□□□ -0.48
CMC1-206ENST00000467644 FARP1Q9Y4F1 1045 aaPredicted RBP12.01□□□□□ -0.49
CMC1-206ENST00000467644 C19orf67A6NJJ6 358 aa11.97□□□□□ -0.49
CMC1-206ENST00000467644 EVX2Q03828 476 aa11.97□□□□□ -0.49
CMC1-206ENST00000467644 SP7Q8TDD2 431 aaPredicted RBP11.94□□□□□ -0.5
CMC1-206ENST00000467644 MNX1P50219 401 aaPredicted RBP11.9□□□□□ -0.5
CMC1-206ENST00000467644 CD44P16070 742 aaKnown RBP11.85□□□□□ -0.51
CMC1-206ENST00000467644 MIER1Q8N108 512 aa11.84□□□□□ -0.51
CMC1-206ENST00000467644 NPM1P06748 294 aaKnown RBP eCLIP11.81□□□□□ -0.52
CMC1-206ENST00000467644 FBXO3Q9UK99 471 aa11.81□□□□□ -0.52
CMC1-206ENST00000467644 PLEKHG5O94827 1062 aa11.78□□□□□ -0.52
CMC1-206ENST00000467644 PLCD3Q8N3E9 789 aa11.78□□□□□ -0.52
CMC1-206ENST00000467644 ZRANB1Q9UGI0 708 aa11.74□□□□□ -0.53
CMC1-206ENST00000467644 GABBR2O75899 941 aa11.71□□□□□ -0.53
CMC1-206ENST00000467644 ZNF579Q8NAF0 562 aaKnown RBP11.69□□□□□ -0.54
CMC1-206ENST00000467644 PAK3O75914 559 aaPredicted RBP11.68□□□□□ -0.54
CMC1-206ENST00000467644 VASPP50552 380 aaPredicted RBP11.68□□□□□ -0.54
CMC1-206ENST00000467644 ZBTB47Q9UFB7 747 aaPredicted RBP11.66□□□□□ -0.54
CMC1-206ENST00000467644 RASEFQ8IZ41 740 aa11.63□□□□□ -0.55
CMC1-206ENST00000467644 PHF12Q96QT6 1004 aa11.62□□□□□ -0.55
CMC1-206ENST00000467644 TSPYL2Q9H2G4 693 aaPredicted RBP11.62□□□□□ -0.55
CMC1-206ENST00000467644 CLCN6P51797 869 aa11.6□□□□□ -0.55
CMC1-206ENST00000467644 NUBP1P53384 320 aa11.6□□□□□ -0.55
CMC1-206ENST00000467644 CCDC61Q9Y6R9 512 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms