RNA–Protein interactions for RNA: ENST00000617560.1

PHF20-216, Transcript of PHD finger protein 20, humanhuman

TSL 2

Gene PHF20, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-216ENST00000617560 NISCHQ9Y2I1 1504 aa34.15■■■■□ 3.06
PHF20-216ENST00000617560 ABCC9O60706 1549 aa31.67■■■□□ 2.66
PHF20-216ENST00000617560 CCDC180Q9P1Z9 1646 aa30.9■■■□□ 2.54
PHF20-216ENST00000617560 DNAJC5BQ9UF47 199 aa30.34■■■□□ 2.45
PHF20-216ENST00000617560 RB1CC1Q8TDY2 1594 aa29.76■■■□□ 2.35
PHF20-216ENST00000617560 PABPN1Q86U42 306 aaKnown RBP eCLIP29.4■■■□□ 2.3
PHF20-216ENST00000617560 NACADO15069 1562 aa29.36■■■□□ 2.29
PHF20-216ENST00000617560 DCAF8L2P0C7V8 631 aa29.21■■■□□ 2.27
PHF20-216ENST00000617560 UNC13AQ9UPW8 1703 aa29.17■■■□□ 2.26
PHF20-216ENST00000617560 BICRAQ9NZM4 1560 aa28.97■■■□□ 2.23
PHF20-216ENST00000617560 MYO15BQ96JP2 1530 aa28.69■■■□□ 2.18
PHF20-216ENST00000617560 CECR2Q9BXF3 1484 aa28.55■■■□□ 2.16
PHF20-216ENST00000617560 CC2D2AQ9P2K1 1620 aa28.54■■■□□ 2.16
PHF20-216ENST00000617560 SHROOM4Q9ULL8 1493 aa28.37■■■□□ 2.13
PHF20-216ENST00000617560 EIF4G1Q04637 1599 aaKnown RBP28.29■■■□□ 2.12
PHF20-216ENST00000617560 DNAJC5Q9H3Z4 198 aa28.27■■■□□ 2.12
PHF20-216ENST00000617560 SCRIBQ14160 1630 aa28.22■■■□□ 2.11
PHF20-216ENST00000617560 ZCCHC6Q5VYS8 1495 aaKnown RBP28.15■■■□□ 2.1
PHF20-216ENST00000617560 DCAF1Q9Y4B6 1507 aa28.09■■■□□ 2.09
PHF20-216ENST00000617560 CUX2O14529 1486 aa27.47■■□□□ 1.99
PHF20-216ENST00000617560 ERCC6Q03468 1493 aa27.35■■□□□ 1.97
PHF20-216ENST00000617560 NCAPD3P42695 1498 aa27.13■■□□□ 1.93
PHF20-216ENST00000617560 NESP48681 1621 aa27.04■■□□□ 1.92
PHF20-216ENST00000617560 ATAD2BQ9ULI0 1458 aa26.99■■□□□ 1.91
PHF20-216ENST00000617560 HMGXB3Q12766 1538 aa26.86■■□□□ 1.89
PHF20-216ENST00000617560 SMARCA2P51531 1590 aa26.84■■□□□ 1.89
PHF20-216ENST00000617560 THOC2Q8NI27 1593 aaKnown RBP26.84■■□□□ 1.89
PHF20-216ENST00000617560 TRIM41Q8WV44 630 aa26.83■■□□□ 1.89
PHF20-216ENST00000617560 SMARCA4P51532 1647 aa26.8■■□□□ 1.88
PHF20-216ENST00000617560 BAZ1BQ9UIG0 1483 aaKnown RBP26.69■■□□□ 1.86
PHF20-216ENST00000617560 KIF21AQ7Z4S6 1674 aa26.63■■□□□ 1.85
PHF20-216ENST00000617560 LAMC3Q9Y6N6 1575 aa26.63■■□□□ 1.85
PHF20-216ENST00000617560 BAZ1AQ9NRL2 1556 aaPredicted RBP26.53■■□□□ 1.84
PHF20-216ENST00000617560 PDS5BQ9NTI5 1447 aa26.49■■□□□ 1.83
PHF20-216ENST00000617560 PEG3Q9GZU2 1588 aa26.49■■□□□ 1.83
PHF20-216ENST00000617560 MROH2BQ7Z745 1585 aa26.36■■□□□ 1.81
PHF20-216ENST00000617560 MRC2Q9UBG0 1479 aa26.33■■□□□ 1.81
PHF20-216ENST00000617560 CADPSQ9ULU8 1353 aa26.3■■□□□ 1.8
PHF20-216ENST00000617560 WDR62O43379 1518 aa26.29■■□□□ 1.8
PHF20-216ENST00000617560 OSCARQ8IYS5 282 aa26.13■■□□□ 1.77
PHF20-216ENST00000617560 CEP164Q9UPV0 1460 aa26.1■■□□□ 1.77
PHF20-216ENST00000617560 FANCD2Q9BXW9 1451 aa26.03■■□□□ 1.76
PHF20-216ENST00000617560 WIZO95785 1651 aa26.03■■□□□ 1.76
PHF20-216ENST00000617560 RIMBP3CA6NJZ7 1639 aa25.92■■□□□ 1.74
PHF20-216ENST00000617560 RIMBP3BA6NNM3 1639 aa25.92■■□□□ 1.74
PHF20-216ENST00000617560 RIMBP3Q9UFD9 1639 aa25.92■■□□□ 1.74
PHF20-216ENST00000617560 URB2Q14146 1524 aaKnown RBP25.88■■□□□ 1.73
PHF20-216ENST00000617560 CFTRP13569 1480 aa25.85■■□□□ 1.73
PHF20-216ENST00000617560 ARHGEF11O15085 1522 aa25.75■■□□□ 1.71
PHF20-216ENST00000617560 ZNF608Q9ULD9 1512 aaPredicted RBP25.69■■□□□ 1.7
PHF20-216ENST00000617560 CYB5RLQ6IPT4 315 aa25.63■■□□□ 1.69
PHF20-216ENST00000617560 TOP2AP11388 1531 aaKnown RBP25.58■■□□□ 1.69
PHF20-216ENST00000617560 IFT140Q96RY7 1462 aa25.58■■□□□ 1.69
PHF20-216ENST00000617560 TRHP20396 242 aaPredicted RBP25.56■■□□□ 1.68
PHF20-216ENST00000617560 PRDM2Q13029 1718 aa25.54■■□□□ 1.68
PHF20-216ENST00000617560 RSF1Q96T23 1441 aaPredicted RBP25.54■■□□□ 1.68
PHF20-216ENST00000617560 EIF4G3O43432 1585 aaKnown RBP25.48■■□□□ 1.67
PHF20-216ENST00000617560 ARAP1Q96P48 1450 aa25.47■■□□□ 1.67
PHF20-216ENST00000617560 TOPBP1Q92547 1522 aa25.46■■□□□ 1.67
PHF20-216ENST00000617560 CHD1O14646 1710 aa25.45■■□□□ 1.66
PHF20-216ENST00000617560 AQRO60306 1485 aaKnown RBP eCLIP25.36■■□□□ 1.652e-7■■■□□ 16.8
PHF20-216ENST00000617560 FBLN2P98095 1184 aa25.35■■□□□ 1.65
PHF20-216ENST00000617560 CCDC88BA6NC98 1476 aa25.34■■□□□ 1.65
PHF20-216ENST00000617560 AEBP2Q6ZN18 517 aaPredicted RBP25.29■■□□□ 1.64
PHF20-216ENST00000617560 DNMBPQ6XZF7 1577 aa25.28■■□□□ 1.64
PHF20-216ENST00000617560 TARBP1Q13395 1621 aaKnown RBP25.28■■□□□ 1.64
PHF20-216ENST00000617560 ABCC8Q09428 1581 aa25.27■■□□□ 1.64
PHF20-216ENST00000617560 POLA1P09884 1462 aaPredicted RBP25.15■■□□□ 1.62
PHF20-216ENST00000617560 RAD54L2Q9Y4B4 1467 aa25.12■■□□□ 1.61
PHF20-216ENST00000617560 TDRD9Q8NDG6 1382 aaKnown RBP25.11■■□□□ 1.61
PHF20-216ENST00000617560 CLASP1Q7Z460 1538 aa25.1■■□□□ 1.61
PHF20-216ENST00000617560 SNAPC4Q5SXM2 1469 aa25.07■■□□□ 1.6
PHF20-216ENST00000617560 SOGA1O94964 1423 aa25.03■■□□□ 1.6
PHF20-216ENST00000617560 CHMP7Q8WUX9 453 aaPredicted RBP25■■□□□ 1.59
PHF20-216ENST00000617560 SYNJ1O43426 1573 aa25■■□□□ 1.59
PHF20-216ENST00000617560 FGD5Q6ZNL6 1462 aa24.91■■□□□ 1.58
PHF20-216ENST00000617560 MAGI1Q96QZ7 1491 aaPredicted RBP24.91■■□□□ 1.58
PHF20-216ENST00000617560 GAPVD1Q14C86 1478 aa24.89■■□□□ 1.57
PHF20-216ENST00000617560 WDR97A6NE52 1622 aa24.87■■□□□ 1.57
PHF20-216ENST00000617560 GRIN2BQ13224 1484 aa24.86■■□□□ 1.57
PHF20-216ENST00000617560 SYNJ2O15056 1496 aa24.85■■□□□ 1.57
PHF20-216ENST00000617560 CUX1P39880 1505 aa24.8■■□□□ 1.56
PHF20-216ENST00000617560 PBRM1Q86U86 1689 aa24.76■■□□□ 1.55
PHF20-216ENST00000617560 ERCC6L2Q5T890 1561 aa24.74■■□□□ 1.55
PHF20-216ENST00000617560 ABCA5Q8WWZ7 1642 aa24.6■■□□□ 1.53
PHF20-216ENST00000617560 CEP170Q5SW79 1584 aa24.58■■□□□ 1.52
PHF20-216ENST00000617560 KIF13AQ9H1H9 1805 aa24.56■■□□□ 1.52
PHF20-216ENST00000617560 GRIN2AQ12879 1464 aa24.56■■□□□ 1.52
PHF20-216ENST00000617560 ABCA10Q8WWZ4 1543 aa24.56■■□□□ 1.52
PHF20-216ENST00000617560 NUP160Q12769 1436 aa24.49■■□□□ 1.51
PHF20-216ENST00000617560 ADAMTS12P58397 1594 aa24.47■■□□□ 1.51
PHF20-216ENST00000617560 SHROOM2Q13796 1616 aa24.46■■□□□ 1.51
PHF20-216ENST00000617560 FAM69CQ0P6D2 419 aa24.34■■□□□ 1.49
PHF20-216ENST00000617560 FHAD1B1AJZ9 1412 aa24.34■■□□□ 1.49
PHF20-216ENST00000617560 PRG4Q92954 1404 aaPredicted RBP24.34■■□□□ 1.49
PHF20-216ENST00000617560 WRNQ14191 1432 aaPredicted RBP eCLIP24.32■■□□□ 1.48
PHF20-216ENST00000617560 KDM4FA0A1W2PPD8 638 aa24.31■■□□□ 1.48
PHF20-216ENST00000617560 ABCC10Q5T3U5 1492 aa24.3■■□□□ 1.48
PHF20-216ENST00000617560 ILDR1Q86SU0 546 aaPredicted RBP24.29■■□□□ 1.48
PHF20-216ENST00000617560 JPH4Q96JJ6 628 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms