RNA–Protein interactions for RNA: ENST00000378954.8

ATL2-201, Transcript of atlastin GTPase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATL2, Length 2,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL2-201ENST00000378954 NISCHQ9Y2I1 1504 aa29.34■■■□□ 2.29
ATL2-201ENST00000378954 CCDC180Q9P1Z9 1646 aa25.2■■□□□ 1.62
ATL2-201ENST00000378954 ZCCHC6Q5VYS8 1495 aaKnown RBP24.7■■□□□ 1.55
ATL2-201ENST00000378954 SHROOM4Q9ULL8 1493 aa24.58■■□□□ 1.52
ATL2-201ENST00000378954 DCAF8L2P0C7V8 631 aa24.49■■□□□ 1.51
ATL2-201ENST00000378954 DCAF1Q9Y4B6 1507 aa24.08■■□□□ 1.45
ATL2-201ENST00000378954 ABCC9O60706 1549 aa23.87■■□□□ 1.41
ATL2-201ENST00000378954 SUPT5HO00267 1087 aaKnown RBP23.82■■□□□ 1.4
ATL2-201ENST00000378954 MYO15BQ96JP2 1530 aa23.6■■□□□ 1.37
ATL2-201ENST00000378954 SCRIBQ14160 1630 aa23.53■■□□□ 1.36
ATL2-201ENST00000378954 NACADO15069 1562 aa23.45■■□□□ 1.34
ATL2-201ENST00000378954 RB1CC1Q8TDY2 1594 aa23.19■■□□□ 1.3
ATL2-201ENST00000378954 RSF1Q96T23 1441 aaPredicted RBP23■■□□□ 1.27
ATL2-201ENST00000378954 CECR2Q9BXF3 1484 aa22.93■■□□□ 1.26
ATL2-201ENST00000378954 CHIC1Q5VXU3 224 aa22.88■■□□□ 1.25
ATL2-201ENST00000378954 UNC13AQ9UPW8 1703 aa22.79■■□□□ 1.24
ATL2-201ENST00000378954 MROH2BQ7Z745 1585 aa22.78■■□□□ 1.24
ATL2-201ENST00000378954 PABPN1Q86U42 306 aaKnown RBP eCLIP22.71■■□□□ 1.23
ATL2-201ENST00000378954 WIZO95785 1651 aa22.61■■□□□ 1.21
ATL2-201ENST00000378954 BICRAQ9NZM4 1560 aa22.59■■□□□ 1.21
ATL2-201ENST00000378954 BAZ1AQ9NRL2 1556 aaPredicted RBP22.57■■□□□ 1.2
ATL2-201ENST00000378954 SMARCA4P51532 1647 aa22.45■■□□□ 1.19
ATL2-201ENST00000378954 TOP2AP11388 1531 aaKnown RBP22.25■■□□□ 1.15
ATL2-201ENST00000378954 TRIM41Q8WV44 630 aa22.23■■□□□ 1.15
ATL2-201ENST00000378954 LOC105371045A0A1W2PR82 267 aa22.18■■□□□ 1.14
ATL2-201ENST00000378954 CCDC88BA6NC98 1476 aa22.15■■□□□ 1.14
ATL2-201ENST00000378954 SMARCA2P51531 1590 aa22.11■■□□□ 1.13
ATL2-201ENST00000378954 PEG3Q9GZU2 1588 aa22.06■■□□□ 1.12
ATL2-201ENST00000378954 EIF4G1Q04637 1599 aaKnown RBP22.04■■□□□ 1.12
ATL2-201ENST00000378954 ATAD2BQ9ULI0 1458 aa22.04■■□□□ 1.12
ATL2-201ENST00000378954 FAM9AQ8IZU1 332 aaPredicted RBP22.03■■□□□ 1.12
ATL2-201ENST00000378954 BAZ1BQ9UIG0 1483 aaKnown RBP21.94■■□□□ 1.1
ATL2-201ENST00000378954 ABCC8Q09428 1581 aa21.9■■□□□ 1.1
ATL2-201ENST00000378954 EHMT2Q96KQ7 1210 aa21.86■■□□□ 1.09
ATL2-201ENST00000378954 NCAPD3P42695 1498 aa21.72■■□□□ 1.07
ATL2-201ENST00000378954 HMGXB3Q12766 1538 aa21.65■■□□□ 1.06
ATL2-201ENST00000378954 WRNQ14191 1432 aaPredicted RBP eCLIP21.62■■□□□ 1.05
ATL2-201ENST00000378954 SOGA1O94964 1423 aa21.59■■□□□ 1.05
ATL2-201ENST00000378954 PCGF6Q9BYE7 350 aa21.54■■□□□ 1.04
ATL2-201ENST00000378954 SYNJ1O43426 1573 aa21.52■■□□□ 1.04
ATL2-201ENST00000378954 RUSC2Q8N2Y8 1516 aa21.52■■□□□ 1.03
ATL2-201ENST00000378954 CC2D2AQ9P2K1 1620 aa21.48■■□□□ 1.03
ATL2-201ENST00000378954 CSRNP3Q8WYN3 585 aa21.41■■□□□ 1.02
ATL2-201ENST00000378954 CFTRP13569 1480 aa21.38■■□□□ 1.01
ATL2-201ENST00000378954 EEA1Q15075 1411 aa21.36■■□□□ 1.01
ATL2-201ENST00000378954 TOP2BQ02880 1626 aa21.3■■□□□ 1
ATL2-201ENST00000378954 UBTFP17480 764 aaKnown RBP21.27■■□□□ 1
ATL2-201ENST00000378954 TRIM26Q12899 539 aaPredicted RBP21.26■□□□□ 0.99
ATL2-201ENST00000378954 CADPSQ9ULU8 1353 aa21.26■□□□□ 0.99
ATL2-201ENST00000378954 CUX1P39880 1505 aa21.25■□□□□ 0.99
ATL2-201ENST00000378954 BIVM-ERCC5R4GMW8 1640 aa21.22■□□□□ 0.99
ATL2-201ENST00000378954 PPARGC1BQ86YN6 1023 aaKnown RBP21.22■□□□□ 0.99
ATL2-201ENST00000378954 TNIKQ9UKE5 1360 aa21.21■□□□□ 0.99
ATL2-201ENST00000378954 CEP162Q5TB80 1403 aa21.2■□□□□ 0.98
ATL2-201ENST00000378954 GOLGA3Q08378 1498 aa21.19■□□□□ 0.98
ATL2-201ENST00000378954 DNAJC5BQ9UF47 199 aa21.16■□□□□ 0.98
ATL2-201ENST00000378954 CEP164Q9UPV0 1460 aa21.13■□□□□ 0.97
ATL2-201ENST00000378954 HRCP23327 699 aa21.11■□□□□ 0.97
ATL2-201ENST00000378954 PRDM2Q13029 1718 aa21.11■□□□□ 0.97
ATL2-201ENST00000378954 NESP48681 1621 aa21.09■□□□□ 0.97
ATL2-201ENST00000378954 RAPGEF2Q9Y4G8 1499 aa21.09■□□□□ 0.97
ATL2-201ENST00000378954 KIF21BO75037 1637 aa21.09■□□□□ 0.97
ATL2-201ENST00000378954 FANCD2Q9BXW9 1451 aa21.05■□□□□ 0.96
ATL2-201ENST00000378954 RANGAP1P46060 587 aaPredicted RBP21.01■□□□□ 0.95
ATL2-201ENST00000378954 KIF27Q86VH2 1401 aa21■□□□□ 0.95
ATL2-201ENST00000378954 TTBK1Q5TCY1 1321 aaPredicted RBP20.99■□□□□ 0.95
ATL2-201ENST00000378954 FGD5Q6ZNL6 1462 aa20.96■□□□□ 0.95
ATL2-201ENST00000378954 PRXQ9BXM0 1461 aa20.95■□□□□ 0.94
ATL2-201ENST00000378954 CLIP1P30622 1438 aa20.94■□□□□ 0.94
ATL2-201ENST00000378954 CUX2O14529 1486 aa20.93■□□□□ 0.94
ATL2-201ENST00000378954 LAMC3Q9Y6N6 1575 aa20.86■□□□□ 0.93
ATL2-201ENST00000378954 ERICH3Q5RHP9 1530 aa20.86■□□□□ 0.93
ATL2-201ENST00000378954 TOPBP1Q92547 1522 aa20.84■□□□□ 0.93
ATL2-201ENST00000378954 IGF1RP08069 1367 aa20.84■□□□□ 0.93
ATL2-201ENST00000378954 RAD54L2Q9Y4B4 1467 aa20.83■□□□□ 0.93
ATL2-201ENST00000378954 DNMBPQ6XZF7 1577 aa20.83■□□□□ 0.93
ATL2-201ENST00000378954 POLA1P09884 1462 aaPredicted RBP20.8■□□□□ 0.92
ATL2-201ENST00000378954 URB2Q14146 1524 aaKnown RBP20.78■□□□□ 0.92
ATL2-201ENST00000378954 PDS5BQ9NTI5 1447 aa20.76■□□□□ 0.91
ATL2-201ENST00000378954 VPS8Q8N3P4 1428 aa20.76■□□□□ 0.91
ATL2-201ENST00000378954 CARMIL1Q5VZK9 1371 aa20.74■□□□□ 0.91
ATL2-201ENST00000378954 ABCA10Q8WWZ4 1543 aa20.7■□□□□ 0.9
ATL2-201ENST00000378954 KIF21AQ7Z4S6 1674 aa20.69■□□□□ 0.9
ATL2-201ENST00000378954 ARAP1Q96P48 1450 aa20.67■□□□□ 0.9
ATL2-201ENST00000378954 APLP2Q06481 763 aa20.63■□□□□ 0.89
ATL2-201ENST00000378954 TDRD9Q8NDG6 1382 aaKnown RBP20.63■□□□□ 0.89
ATL2-201ENST00000378954 ARHGAP35Q9NRY4 1499 aa20.6■□□□□ 0.89
ATL2-201ENST00000378954 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.57■□□□□ 0.88
ATL2-201ENST00000378954 WDR97A6NE52 1622 aa20.53■□□□□ 0.88
ATL2-201ENST00000378954 GAPVD1Q14C86 1478 aa20.5■□□□□ 0.87
ATL2-201ENST00000378954 KANK4Q5T7N3 995 aaPredicted RBP20.5■□□□□ 0.87
ATL2-201ENST00000378954 ZEB1P37275 1124 aaPredicted RBP20.49■□□□□ 0.87
ATL2-201ENST00000378954 P3H3Q8IVL6 736 aa20.48■□□□□ 0.87
ATL2-201ENST00000378954 MRC2Q9UBG0 1479 aa20.47■□□□□ 0.87
ATL2-201ENST00000378954 ABCA5Q8WWZ7 1642 aa20.47■□□□□ 0.87
ATL2-201ENST00000378954 CUL7Q14999 1698 aa20.45■□□□□ 0.86
ATL2-201ENST00000378954 TARBP1Q13395 1621 aaKnown RBP20.45■□□□□ 0.86
ATL2-201ENST00000378954 CCER1Q8TC90 406 aaPredicted RBP20.45■□□□□ 0.86
ATL2-201ENST00000378954 HNRNPUL2Q1KMD3 747 aaKnown RBP20.44■□□□□ 0.86
ATL2-201ENST00000378954 AQRO60306 1485 aaKnown RBP eCLIP20.41■□□□□ 0.864e-7■■■□□ 18.6
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms