RNA–Protein interactions for RNA: ENST00000619199.4

ATP13A3-211, Transcript of ATPase 13A3, humanhuman

TSL 2 BASIC

Gene ATP13A3, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-211ENST00000619199 NISCHQ9Y2I1 1504 aa8.06□□□□□ -1.12
ATP13A3-211ENST00000619199 PELP1Q8IZL8 1130 aaKnown RBP7.95□□□□□ -1.14
ATP13A3-211ENST00000619199 DCAF8L2P0C7V8 631 aa7.75□□□□□ -1.17
ATP13A3-211ENST00000619199 FAM9AQ8IZU1 332 aaPredicted RBP7.64□□□□□ -1.19
ATP13A3-211ENST00000619199 CCER1Q8TC90 406 aaPredicted RBP7.57□□□□□ -1.2
ATP13A3-211ENST00000619199 MYT1Q01538 1121 aa7.51□□□□□ -1.21
ATP13A3-211ENST00000619199 APLP2Q06481 763 aa7.48□□□□□ -1.21
ATP13A3-211ENST00000619199 ERICH6Q7L0X2 663 aa7.47□□□□□ -1.21
ATP13A3-211ENST00000619199 SLC24A1O60721 1099 aa7.44□□□□□ -1.22
ATP13A3-211ENST00000619199 HRCP23327 699 aa7.41□□□□□ -1.22
ATP13A3-211ENST00000619199 YTHDC1Q96MU7 727 aaKnown RBP7.3□□□□□ -1.24
ATP13A3-211ENST00000619199 CENPBP07199 599 aaPredicted RBP7.27□□□□□ -1.24
ATP13A3-211ENST00000619199 SUPT5HO00267 1087 aaKnown RBP7.24□□□□□ -1.25
ATP13A3-211ENST00000619199 NEFLP07196 543 aa7.23□□□□□ -1.25
ATP13A3-211ENST00000619199 TTBK1Q5TCY1 1321 aaPredicted RBP7.2□□□□□ -1.26
ATP13A3-211ENST00000619199 PCGF6Q9BYE7 350 aa7.19□□□□□ -1.26
ATP13A3-211ENST00000619199 ZEB1P37275 1124 aaPredicted RBP7.19□□□□□ -1.26
ATP13A3-211ENST00000619199 DAXXQ9UER7 740 aaPredicted RBP7.15□□□□□ -1.26
ATP13A3-211ENST00000619199 CHIC1Q5VXU3 224 aa7.11□□□□□ -1.27
ATP13A3-211ENST00000619199 SHROOM4Q9ULL8 1493 aa7.08□□□□□ -1.28
ATP13A3-211ENST00000619199 PPARGC1BQ86YN6 1023 aaKnown RBP7.07□□□□□ -1.28
ATP13A3-211ENST00000619199 DCAF1Q9Y4B6 1507 aa7.05□□□□□ -1.28
ATP13A3-211ENST00000619199 TRIM26Q12899 539 aaPredicted RBP7.03□□□□□ -1.28
ATP13A3-211ENST00000619199 EHMT2Q96KQ7 1210 aa7□□□□□ -1.29
ATP13A3-211ENST00000619199 ATP1B4Q9UN42 357 aaPredicted RBP6.96□□□□□ -1.3
ATP13A3-211ENST00000619199 MYO15BQ96JP2 1530 aa6.95□□□□□ -1.3
ATP13A3-211ENST00000619199 SCAF1Q9H7N4 1312 aaKnown RBP6.92□□□□□ -1.3
ATP13A3-211ENST00000619199 ZNF316A6NFI3 1004 aaPredicted RBP6.91□□□□□ -1.3
ATP13A3-211ENST00000619199 RTL5Q5HYW3 569 aaPredicted RBP6.91□□□□□ -1.3
ATP13A3-211ENST00000619199 MYT1LQ9UL68 1186 aa6.89□□□□□ -1.31
ATP13A3-211ENST00000619199 CCDC180Q9P1Z9 1646 aa6.88□□□□□ -1.31
ATP13A3-211ENST00000619199 LOC105371045A0A1W2PR82 267 aa6.86□□□□□ -1.31
ATP13A3-211ENST00000619199 ZBTB47Q9UFB7 747 aaPredicted RBP6.85□□□□□ -1.31
ATP13A3-211ENST00000619199 ACIN1Q9UKV3 1341 aaKnown RBP6.85□□□□□ -1.31
ATP13A3-211ENST00000619199 UBTFP17480 764 aaKnown RBP6.85□□□□□ -1.31
ATP13A3-211ENST00000619199 ZCCHC6Q5VYS8 1495 aaKnown RBP6.85□□□□□ -1.31
ATP13A3-211ENST00000619199 CLSPNQ9HAW4 1339 aa6.84□□□□□ -1.31
ATP13A3-211ENST00000619199 RANGAP1P46060 587 aaPredicted RBP6.83□□□□□ -1.32
ATP13A3-211ENST00000619199 TRIM41Q8WV44 630 aa6.83□□□□□ -1.32
ATP13A3-211ENST00000619199 NEFMP07197 916 aa6.83□□□□□ -1.32
ATP13A3-211ENST00000619199 NEUROD1Q13562 356 aa6.76□□□□□ -1.33
ATP13A3-211ENST00000619199 GTF3C3Q9Y5Q9 886 aa6.76□□□□□ -1.33
ATP13A3-211ENST00000619199 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.75□□□□□ -1.33
ATP13A3-211ENST00000619199 HNRNPUL2Q1KMD3 747 aaKnown RBP6.75□□□□□ -1.33
ATP13A3-211ENST00000619199 POLR3GLQ9BT43 218 aa6.75□□□□□ -1.33
ATP13A3-211ENST00000619199 SLC4A1APQ9BWU0 796 aaKnown RBP6.75□□□□□ -1.33
ATP13A3-211ENST00000619199 DIEXFQ68CQ4 756 aaKnown RBP6.72□□□□□ -1.33
ATP13A3-211ENST00000619199 ANP32BQ92688 251 aaKnown RBP6.7□□□□□ -1.34
ATP13A3-211ENST00000619199 PRKCSHP14314 528 aaPredicted RBP6.69□□□□□ -1.34
ATP13A3-211ENST00000619199 GLIPR1L2Q4G1C9 344 aa6.65□□□□□ -1.34
ATP13A3-211ENST00000619199 CDK11BP21127 795 aaKnown RBP6.65□□□□□ -1.34
ATP13A3-211ENST00000619199 CDK11AQ9UQ88 783 aaPredicted RBP6.65□□□□□ -1.34
ATP13A3-211ENST00000619199 CANXP27824 592 aaKnown RBP6.62□□□□□ -1.35
ATP13A3-211ENST00000619199 EIF5BO60841 1220 aaKnown RBP6.61□□□□□ -1.35
ATP13A3-211ENST00000619199 ITGAEP38570 1179 aa6.57□□□□□ -1.36
ATP13A3-211ENST00000619199 ANP32AP39687 249 aaKnown RBP6.56□□□□□ -1.36
ATP13A3-211ENST00000619199 UPF2Q9HAU5 1272 aaKnown RBP6.55□□□□□ -1.36
ATP13A3-211ENST00000619199 ANP32CO43423 234 aa6.54□□□□□ -1.36
ATP13A3-211ENST00000619199 NCBP3Q53F19 620 aaKnown RBP6.53□□□□□ -1.36
ATP13A3-211ENST00000619199 TRIM52Q96A61 297 aa6.53□□□□□ -1.36
ATP13A3-211ENST00000619199 HSP90AA1P07900 732 aaKnown RBP6.53□□□□□ -1.36
ATP13A3-211ENST00000619199 BCANQ96GW7 911 aa6.51□□□□□ -1.37
ATP13A3-211ENST00000619199 ESF1Q9H501 851 aaKnown RBP6.51□□□□□ -1.37
ATP13A3-211ENST00000619199 RSF1Q96T23 1441 aaPredicted RBP6.51□□□□□ -1.37
ATP13A3-211ENST00000619199 CNGB1Q14028 1251 aaPredicted RBP6.51□□□□□ -1.37
ATP13A3-211ENST00000619199 ANP32EQ9BTT0 268 aa6.5□□□□□ -1.37
ATP13A3-211ENST00000619199 RTN4Q9NQC3 1192 aaKnown RBP6.49□□□□□ -1.37
ATP13A3-211ENST00000619199 WRNQ14191 1432 aaPredicted RBP eCLIP6.48□□□□□ -1.37
ATP13A3-211ENST00000619199 MIER1Q8N108 512 aa6.48□□□□□ -1.37
ATP13A3-211ENST00000619199 PLPPR3Q6T4P5 718 aa6.48□□□□□ -1.37
ATP13A3-211ENST00000619199 ABCC9O60706 1549 aa6.47□□□□□ -1.37
ATP13A3-211ENST00000619199 FAM50AQ14320 339 aaKnown RBP6.46□□□□□ -1.38
ATP13A3-211ENST00000619199 NPM2Q86SE8 214 aaKnown RBP6.46□□□□□ -1.38
ATP13A3-211ENST00000619199 BCL11AQ9H165 835 aa6.46□□□□□ -1.38
ATP13A3-211ENST00000619199 TNNT2P45379 298 aaPredicted RBP6.46□□□□□ -1.38
ATP13A3-211ENST00000619199 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.45□□□□□ -1.38
ATP13A3-211ENST00000619199 RB1CC1Q8TDY2 1594 aa6.45□□□□□ -1.38
ATP13A3-211ENST00000619199 AMER1Q5JTC6 1135 aaPredicted RBP6.44□□□□□ -1.38
ATP13A3-211ENST00000619199 NCLP19338 710 aaKnown RBP6.43□□□□□ -1.38
ATP13A3-211ENST00000619199 SUPT16HQ9Y5B9 1047 aaKnown RBP6.42□□□□□ -1.38
ATP13A3-211ENST00000619199 ARXQ96QS3 562 aa6.41□□□□□ -1.38
ATP13A3-211ENST00000619199 MYH16Q9H6N6 1097 aa6.41□□□□□ -1.38
ATP13A3-211ENST00000619199 TSHZ2Q9NRE2 1034 aa6.4□□□□□ -1.38
ATP13A3-211ENST00000619199 ZNF326Q5BKZ1 582 aaKnown RBP6.4□□□□□ -1.39
ATP13A3-211ENST00000619199 TRIM44Q96DX7 344 aaPredicted RBP6.4□□□□□ -1.39
ATP13A3-211ENST00000619199 STAG3Q9UJ98 1225 aa6.4□□□□□ -1.39
ATP13A3-211ENST00000619199 EEA1Q15075 1411 aa6.4□□□□□ -1.39
ATP13A3-211ENST00000619199 ZRSR1Q15695 479 aaKnown RBP6.4□□□□□ -1.39
ATP13A3-211ENST00000619199 TNIKQ9UKE5 1360 aa6.39□□□□□ -1.39
ATP13A3-211ENST00000619199 L1TD1Q5T7N2 865 aaKnown RBP6.39□□□□□ -1.39
ATP13A3-211ENST00000619199 GOLGA6L22H0YM25 854 aa6.38□□□□□ -1.39
ATP13A3-211ENST00000619199 CEP162Q5TB80 1403 aa6.38□□□□□ -1.39
ATP13A3-211ENST00000619199 HOMEZQ8IX15 550 aa6.37□□□□□ -1.39
ATP13A3-211ENST00000619199 GOLGA6L6A8MZA4 724 aa6.36□□□□□ -1.39
ATP13A3-211ENST00000619199 NRDCO43847 1150 aa6.36□□□□□ -1.39
ATP13A3-211ENST00000619199 CSRNP3Q8WYN3 585 aa6.36□□□□□ -1.39
ATP13A3-211ENST00000619199 NPM1P06748 294 aaKnown RBP eCLIP6.36□□□□□ -1.39
ATP13A3-211ENST00000619199 TULP1O00294 542 aaPredicted RBP6.35□□□□□ -1.39
ATP13A3-211ENST00000619199 BECN1Q14457 450 aa6.34□□□□□ -1.39
ATP13A3-211ENST00000619199 DDRGK1Q96HY6 314 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms