Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.086e-8■□□□□ 10.4
U2AF2P26368 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.03□□□□□ -1.446e-8■□□□□ 10.4
U2AF2P26368 NDUFV3-204ENST00000460740 811 ntTSL 218.23■□□□□ 0.512e-6■□□□□ 10.4
U2AF2P26368 CSNK1D-216ENST00000581108 607 ntTSL 223.64■■□□□ 1.377e-9■□□□□ 10.4
U2AF2P26368 ECHDC2-212ENST00000486170 474 ntTSL 222.87■■□□□ 1.259e-17■□□□□ 10.4
U2AF2P26368 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.067e-9■□□□□ 10.4
U2AF2P26368 KDM5C-214ENST00000497100 1403 ntTSL 520.81■□□□□ 0.927e-9■□□□□ 10.4
U2AF2P26368 ECHDC2-220ENST00000498544 985 ntTSL 220.07■□□□□ 0.89e-17■□□□□ 10.4
U2AF2P26368 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.697e-9■□□□□ 10.4
U2AF2P26368 CSNK1D-214ENST00000580565 566 ntTSL 419.32■□□□□ 0.687e-9■□□□□ 10.4
U2AF2P26368 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.657e-9■□□□□ 10.4
U2AF2P26368 SF3B2-209ENST00000530322 1163 ntTSL 518.98■□□□□ 0.637e-9■□□□□ 10.4
U2AF2P26368 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.48■□□□□ 0.397e-9■□□□□ 10.4
U2AF2P26368 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.367e-9■□□□□ 10.4
U2AF2P26368 ECHDC2-215ENST00000487866 940 ntTSL 517.15■□□□□ 0.349e-17■□□□□ 10.4
U2AF2P26368 ECHDC2-209ENST00000479183 2356 ntTSL 216.97■□□□□ 0.319e-17■□□□□ 10.4
U2AF2P26368 SF3B2-214ENST00000533595 1081 ntTSL 516.54■□□□□ 0.247e-9■□□□□ 10.4
U2AF2P26368 ECHDC2-210ENST00000479593 766 ntTSL 516.26■□□□□ 0.199e-17■□□□□ 10.4
U2AF2P26368 ECHDC2-214ENST00000487851 471 ntTSL 315.14■□□□□ 0.019e-17■□□□□ 10.4
U2AF2P26368 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.017e-9■□□□□ 10.4
U2AF2P26368 ECHDC2-205ENST00000463923 663 ntTSL 313.9□□□□□ -0.189e-17■□□□□ 10.4
U2AF2P26368 SF3B2-203ENST00000524627 841 ntTSL 313.86□□□□□ -0.197e-9■□□□□ 10.4
U2AF2P26368 AC009404.1-202ENST00000439955 968 ntTSL 3 BASIC13.46□□□□□ -0.257e-9■□□□□ 10.4
U2AF2P26368 KDM5C-211ENST00000477109 297 ntTSL 312.83□□□□□ -0.367e-9■□□□□ 10.4
U2AF2P26368 YBX3-203ENST00000366286 704 ntTSL 311.57□□□□□ -0.567e-9■□□□□ 10.4
U2AF2P26368 SPTAN1-206ENST00000475367 2237 ntTSL 211.36□□□□□ -0.597e-9■□□□□ 10.4
U2AF2P26368 ECHDC2-224ENST00000543419 555 ntTSL 39.08□□□□□ -0.969e-17■□□□□ 10.4
U2AF2P26368 SPTAN1-213ENST00000627809 342 ntTSL 39.08□□□□□ -0.967e-9■□□□□ 10.4
U2AF2P26368 YBX3-204ENST00000366290 512 ntTSL 28.63□□□□□ -1.037e-9■□□□□ 10.4
U2AF2P26368 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC7.85□□□□□ -1.157e-9■□□□□ 10.4
U2AF2P26368 YBX3-206ENST00000536823 840 ntTSL 27.82□□□□□ -1.167e-9■□□□□ 10.4
U2AF2P26368 YBX3-210ENST00000540975 677 ntTSL 34.01□□□□□ -1.777e-9■□□□□ 10.4
U2AF2P26368 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.731e-6■□□□□ 10.4
U2AF2P26368 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.085e-6■□□□□ 10.4
U2AF2P26368 RAD9A-205ENST00000538013 924 ntTSL 520.85■□□□□ 0.931e-6■□□□□ 10.4
U2AF2P26368 RAD9A-209ENST00000544620 829 ntTSL 320.58■□□□□ 0.891e-6■□□□□ 10.4
U2AF2P26368 RAD9A-206ENST00000541132 586 ntTSL 319.49■□□□□ 0.711e-6■□□□□ 10.4
U2AF2P26368 DLG1-212ENST00000436682 543 ntTSL 217.86■□□□□ 0.453e-6■□□□□ 10.4
U2AF2P26368 RAD9A-208ENST00000543808 822 ntTSL 517.73■□□□□ 0.431e-6■□□□□ 10.4
U2AF2P26368 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.332e-7■□□□□ 10.4
U2AF2P26368 RAD9A-207ENST00000542139 578 ntTSL 416.52■□□□□ 0.241e-6■□□□□ 10.4
U2AF2P26368 DLG1-211ENST00000434148 309 ntTSL 315.08■□□□□ 05e-6■□□□□ 10.4
U2AF2P26368 DLG1-209ENST00000419553 582 ntTSL 213.68□□□□□ -0.223e-6■□□□□ 10.4
U2AF2P26368 DLG1-206ENST00000412364 710 ntTSL 213.42□□□□□ -0.265e-6■□□□□ 10.4
U2AF2P26368 SPAG9-217ENST00000513906 750 ntTSL 510.4□□□□□ -0.742e-6■□□□□ 10.4
U2AF2P26368 DLG1-219ENST00000456699 629 ntTSL 39.3□□□□□ -0.922e-6■□□□□ 10.4
U2AF2P26368 DLG1-227ENST00000486877 479 ntTSL 29.3□□□□□ -0.925e-6■□□□□ 10.4
U2AF2P26368 CCNB1-203ENST00000505500 1190 ntTSL 1 (best)8.19□□□□□ -1.12e-7■□□□□ 10.4
U2AF2P26368 DLG1-203ENST00000392380 716 ntTSL 34.97□□□□□ -1.612e-6■□□□□ 10.4
U2AF2P26368 TSR1-203ENST00000575049 387 ntTSL 34.83□□□□□ -1.645e-6■□□□□ 10.4
U2AF2P26368 BRWD1-216ENST00000496759 377 ntTSL 32.85□□□□□ -1.954e-6■□□□□ 10.4
U2AF2P26368 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.584e-9■□□□□ 10.4
U2AF2P26368 UBAP2L-216ENST00000484819 1056 ntTSL 210.84□□□□□ -0.672e-7■□□□□ 10.4
U2AF2P26368 ACSS3-204ENST00000548324 2214 ntTSL 29.82□□□□□ -0.841e-6■□□□□ 10.4
U2AF2P26368 EDEM1-205ENST00000465187 585 ntTSL 423.87■■□□□ 1.414e-7■□□□□ 10.4
U2AF2P26368 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.783e-7■□□□□ 10.4
U2AF2P26368 GCLC-203ENST00000504525 1011 ntTSL 325.07■■□□□ 1.68e-7■□□□□ 10.4
U2AF2P26368 SETD3-203ENST00000357563 2191 ntTSL 524.4■■□□□ 1.55e-11■□□□□ 10.4
U2AF2P26368 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.75■□□□□ 0.755e-11■□□□□ 10.4
U2AF2P26368 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.48■□□□□ 0.715e-11■□□□□ 10.4
U2AF2P26368 PPP6R3-215ENST00000528635 538 ntTSL 417.73■□□□□ 0.435e-11■□□□□ 10.4
U2AF2P26368 PPP6R3-217ENST00000529344 603 ntTSL 417.73■□□□□ 0.435e-11■□□□□ 10.4
U2AF2P26368 PLOD2-208ENST00000480704 550 ntTSL 417.12■□□□□ 0.335e-11■□□□□ 10.4
U2AF2P26368 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC15.46■□□□□ 0.075e-11■□□□□ 10.4
U2AF2P26368 PPP6R3-220ENST00000530427 560 ntTSL 512.96□□□□□ -0.335e-11■□□□□ 10.4
U2AF2P26368 PPP6R3-224ENST00000533127 551 ntTSL 411.16□□□□□ -0.625e-11■□□□□ 10.4
U2AF2P26368 PLOD2-205ENST00000469350 723 ntTSL 54.78□□□□□ -1.645e-11■□□□□ 10.4
U2AF2P26368 PPP6R3-207ENST00000525050 513 ntTSL 32.79□□□□□ -1.965e-11■□□□□ 10.4
U2AF2P26368 CNOT2-227ENST00000551043 2288 ntTSL 222.04■■□□□ 1.128e-8■□□□□ 10.4
U2AF2P26368 CNOT2-209ENST00000548159 2549 ntTSL 1 (best)18.59■□□□□ 0.578e-8■□□□□ 10.4
U2AF2P26368 CNOT2-202ENST00000418359 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.168e-8■□□□□ 10.4
U2AF2P26368 CNOT2-223ENST00000550160 993 ntTSL 513.32□□□□□ -0.288e-8■□□□□ 10.4
U2AF2P26368 CNOT2-201ENST00000229195 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.388e-8■□□□□ 10.4
U2AF2P26368 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.593e-6■□□□□ 10.4
U2AF2P26368 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC17.34■□□□□ 0.373e-6■□□□□ 10.4
U2AF2P26368 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.243e-6■□□□□ 10.4
U2AF2P26368 DSTYK-202ENST00000367162 7874 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.53e-6■□□□□ 10.4
U2AF2P26368 DSTYK-201ENST00000367161 7739 ntTSL 1 (best) BASIC11.9□□□□□ -0.53e-6■□□□□ 10.4
U2AF2P26368 AC005307.1-201ENST00000567877 1570 ntTSL 3 BASIC11.06□□□□□ -0.643e-6■□□□□ 10.4
U2AF2P26368 ZFPM2-204ENST00000518180 596 ntTSL 43.6□□□□□ -1.833e-6■□□□□ 10.4
U2AF2P26368 HNRNPH1-228ENST00000515714 690 ntTSL 420.87■□□□□ 0.933e-62■□□□□ 10.4
U2AF2P26368 HNRNPH1-208ENST00000503664 569 ntTSL 418.63■□□□□ 0.573e-62■□□□□ 10.4
U2AF2P26368 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.63■□□□□ 0.573e-62■□□□□ 10.4
U2AF2P26368 HNRNPH1-219ENST00000512273 501 ntTSL 49.39□□□□□ -0.913e-62■□□□□ 10.4
U2AF2P26368 FBXW2-203ENST00000476481 661 ntTSL 321.62■■□□□ 1.052e-7■□□□□ 10.4
U2AF2P26368 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.07■□□□□ 0.81e-9■□□□□ 10.3
U2AF2P26368 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.691e-9■□□□□ 10.3
U2AF2P26368 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.391e-9■□□□□ 10.3
U2AF2P26368 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC16.16■□□□□ 0.181e-9■□□□□ 10.3
U2AF2P26368 RREB1-208ENST00000483150 2833 ntTSL 1 (best)14.78□□□□□ -0.041e-9■□□□□ 10.3
U2AF2P26368 RREB1-207ENST00000475946 9067 ntTSL 1 (best)9.44□□□□□ -0.91e-9■□□□□ 10.3
U2AF2P26368 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC22.45■■□□□ 1.182e-6■□□□□ 10.3
U2AF2P26368 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.72e-6■□□□□ 10.3
U2AF2P26368 SLC38A11-201ENST00000303735 3737 ntTSL 2 BASIC13.2□□□□□ -0.32e-6■□□□□ 10.3
U2AF2P26368 SLC38A11-210ENST00000493887 577 ntTSL 410.53□□□□□ -0.722e-6■□□□□ 10.3
U2AF2P26368 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.642e-6■□□□□ 10.3
U2AF2P26368 SLC38A11-205ENST00000424914 452 ntTSL 53.72□□□□□ -1.812e-6■□□□□ 10.3
U2AF2P26368 SUPT3H-204ENST00000459689 396 ntTSL 24.15□□□□□ -1.755e-7■□□□□ 10.3
U2AF2P26368 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.187e-7■□□□□ 10.3
U2AF2P26368 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.887e-7■□□□□ 10.3
Retrieved 100 of 36,523 protein–RNA pairs in 432 ms