RNA–Protein interactions for RNA: ENST00000580565.1

CSNK1D-214, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-214ENST00000580565 NISCHQ9Y2I1 1504 aa43.56■■■■■ 4.56
CSNK1D-214ENST00000580565 CCDC180Q9P1Z9 1646 aa38.91■■■■□ 3.82
CSNK1D-214ENST00000580565 ABCC9O60706 1549 aa38.89■■■■□ 3.82
CSNK1D-214ENST00000580565 RB1CC1Q8TDY2 1594 aa37.04■■■■□ 3.52
CSNK1D-214ENST00000580565 NACADO15069 1562 aa36.84■■■■□ 3.49
CSNK1D-214ENST00000580565 DCAF8L2P0C7V8 631 aa36.81■■■■□ 3.48
CSNK1D-214ENST00000580565 DNAJC5BQ9UF47 199 aa36.44■■■■□ 3.42
CSNK1D-214ENST00000580565 MYO15BQ96JP2 1530 aa36.39■■■■□ 3.42
CSNK1D-214ENST00000580565 PABPN1Q86U42 306 aaKnown RBP eCLIP36.31■■■■□ 3.4
CSNK1D-214ENST00000580565 ZCCHC6Q5VYS8 1495 aaKnown RBP36.11■■■■□ 3.37
CSNK1D-214ENST00000580565 UNC13AQ9UPW8 1703 aa36.05■■■■□ 3.36
CSNK1D-214ENST00000580565 DCAF1Q9Y4B6 1507 aa35.98■■■■□ 3.35
CSNK1D-214ENST00000580565 BICRAQ9NZM4 1560 aa35.95■■■■□ 3.35
CSNK1D-214ENST00000580565 SCRIBQ14160 1630 aa35.51■■■■□ 3.28
CSNK1D-214ENST00000580565 SHROOM4Q9ULL8 1493 aa35.51■■■■□ 3.28
CSNK1D-214ENST00000580565 CC2D2AQ9P2K1 1620 aa35.09■■■■□ 3.21
CSNK1D-214ENST00000580565 EIF4G1Q04637 1599 aaKnown RBP35.07■■■■□ 3.2
CSNK1D-214ENST00000580565 CECR2Q9BXF3 1484 aa35.03■■■■□ 3.2
CSNK1D-214ENST00000580565 NCAPD3P42695 1498 aa34.07■■■■□ 3.04
CSNK1D-214ENST00000580565 ATAD2BQ9ULI0 1458 aa33.96■■■■□ 3.03
CSNK1D-214ENST00000580565 SMARCA4P51532 1647 aa33.9■■■■□ 3.02
CSNK1D-214ENST00000580565 SMARCA2P51531 1590 aa33.84■■■■□ 3.01
CSNK1D-214ENST00000580565 BAZ1AQ9NRL2 1556 aaPredicted RBP33.78■■■■□ 3
CSNK1D-214ENST00000580565 HMGXB3Q12766 1538 aa33.75■■■□□ 2.99
CSNK1D-214ENST00000580565 BAZ1BQ9UIG0 1483 aaKnown RBP33.63■■■□□ 2.97
CSNK1D-214ENST00000580565 PEG3Q9GZU2 1588 aa33.58■■■□□ 2.97
CSNK1D-214ENST00000580565 ERCC6Q03468 1493 aa33.57■■■□□ 2.97
CSNK1D-214ENST00000580565 MROH2BQ7Z745 1585 aa33.56■■■□□ 2.96
CSNK1D-214ENST00000580565 CUX2O14529 1486 aa33.45■■■□□ 2.95
CSNK1D-214ENST00000580565 NESP48681 1621 aa33.45■■■□□ 2.95
CSNK1D-214ENST00000580565 DNAJC5Q9H3Z4 198 aa33.36■■■□□ 2.93
CSNK1D-214ENST00000580565 LAMC3Q9Y6N6 1575 aa33.2■■■□□ 2.91
CSNK1D-214ENST00000580565 WIZO95785 1651 aa33.1■■■□□ 2.89
CSNK1D-214ENST00000580565 PDS5BQ9NTI5 1447 aa33.08■■■□□ 2.89
CSNK1D-214ENST00000580565 CADPSQ9ULU8 1353 aa33.06■■■□□ 2.88
CSNK1D-214ENST00000580565 THOC2Q8NI27 1593 aaKnown RBP33■■■□□ 2.87
CSNK1D-214ENST00000580565 RSF1Q96T23 1441 aaPredicted RBP32.96■■■□□ 2.87
CSNK1D-214ENST00000580565 KIF21AQ7Z4S6 1674 aa32.9■■■□□ 2.86
CSNK1D-214ENST00000580565 MRC2Q9UBG0 1479 aa32.75■■■□□ 2.83
CSNK1D-214ENST00000580565 TOP2AP11388 1531 aaKnown RBP32.73■■■□□ 2.83
CSNK1D-214ENST00000580565 CFTRP13569 1480 aa32.67■■■□□ 2.82
CSNK1D-214ENST00000580565 WDR62O43379 1518 aa32.64■■■□□ 2.82
CSNK1D-214ENST00000580565 FANCD2Q9BXW9 1451 aa32.64■■■□□ 2.82
CSNK1D-214ENST00000580565 CEP164Q9UPV0 1460 aa32.64■■■□□ 2.82
CSNK1D-214ENST00000580565 CCDC88BA6NC98 1476 aa32.42■■■□□ 2.78
CSNK1D-214ENST00000580565 URB2Q14146 1524 aaKnown RBP32.35■■■□□ 2.77
CSNK1D-214ENST00000580565 PRDM2Q13029 1718 aa32.14■■■□□ 2.74
CSNK1D-214ENST00000580565 OSCARQ8IYS5 282 aa32.04■■■□□ 2.72
CSNK1D-214ENST00000580565 TOPBP1Q92547 1522 aa32.02■■■□□ 2.72
CSNK1D-214ENST00000580565 IFT140Q96RY7 1462 aa32.01■■■□□ 2.71
CSNK1D-214ENST00000580565 ABCC8Q09428 1581 aa31.98■■■□□ 2.71
CSNK1D-214ENST00000580565 TRIM41Q8WV44 630 aa31.94■■■□□ 2.7
CSNK1D-214ENST00000580565 ZNF608Q9ULD9 1512 aaPredicted RBP31.94■■■□□ 2.7
CSNK1D-214ENST00000580565 DNMBPQ6XZF7 1577 aa31.89■■■□□ 2.7
CSNK1D-214ENST00000580565 POLA1P09884 1462 aaPredicted RBP31.71■■■□□ 2.67
CSNK1D-214ENST00000580565 AQRO60306 1485 aaKnown RBP eCLIP31.7■■■□□ 2.662e-7■■■■■ 43.1
CSNK1D-214ENST00000580565 EIF4G3O43432 1585 aaKnown RBP31.69■■■□□ 2.66
CSNK1D-214ENST00000580565 TARBP1Q13395 1621 aaKnown RBP31.69■■■□□ 2.66
CSNK1D-214ENST00000580565 SUPT5HO00267 1087 aaKnown RBP31.65■■■□□ 2.66
CSNK1D-214ENST00000580565 SOGA1O94964 1423 aa31.62■■■□□ 2.65
CSNK1D-214ENST00000580565 RAD54L2Q9Y4B4 1467 aa31.61■■■□□ 2.65
CSNK1D-214ENST00000580565 TDRD9Q8NDG6 1382 aaKnown RBP31.55■■■□□ 2.64
CSNK1D-214ENST00000580565 FGD5Q6ZNL6 1462 aa31.52■■■□□ 2.64
CSNK1D-214ENST00000580565 CUX1P39880 1505 aa31.52■■■□□ 2.64
CSNK1D-214ENST00000580565 FBLN2P98095 1184 aa31.5■■■□□ 2.63
CSNK1D-214ENST00000580565 RIMBP3CA6NJZ7 1639 aa31.46■■■□□ 2.63
CSNK1D-214ENST00000580565 RIMBP3BA6NNM3 1639 aa31.46■■■□□ 2.63
CSNK1D-214ENST00000580565 RIMBP3Q9UFD9 1639 aa31.46■■■□□ 2.63
CSNK1D-214ENST00000580565 ARHGEF11O15085 1522 aa31.43■■■□□ 2.62
CSNK1D-214ENST00000580565 CHD1O14646 1710 aa31.37■■■□□ 2.61
CSNK1D-214ENST00000580565 WDR97A6NE52 1622 aa31.36■■■□□ 2.61
CSNK1D-214ENST00000580565 SNAPC4Q5SXM2 1469 aa31.33■■■□□ 2.61
CSNK1D-214ENST00000580565 GRIN2BQ13224 1484 aa31.29■■■□□ 2.6
CSNK1D-214ENST00000580565 CHMP7Q8WUX9 453 aaPredicted RBP31.29■■■□□ 2.6
CSNK1D-214ENST00000580565 CYB5RLQ6IPT4 315 aa31.28■■■□□ 2.6
CSNK1D-214ENST00000580565 MAGI1Q96QZ7 1491 aaPredicted RBP31.27■■■□□ 2.6
CSNK1D-214ENST00000580565 GAPVD1Q14C86 1478 aa31.21■■■□□ 2.59
CSNK1D-214ENST00000580565 ABCA10Q8WWZ4 1543 aa31.19■■■□□ 2.58
CSNK1D-214ENST00000580565 SYNJ2O15056 1496 aa31.17■■■□□ 2.58
CSNK1D-214ENST00000580565 ARAP1Q96P48 1450 aa31.14■■■□□ 2.57
CSNK1D-214ENST00000580565 WRNQ14191 1432 aaPredicted RBP eCLIP31.13■■■□□ 2.57
CSNK1D-214ENST00000580565 CLASP1Q7Z460 1538 aa31.11■■■□□ 2.57
CSNK1D-214ENST00000580565 SYNJ1O43426 1573 aa31.09■■■□□ 2.57
CSNK1D-214ENST00000580565 ABCA5Q8WWZ7 1642 aa31.06■■■□□ 2.56
CSNK1D-214ENST00000580565 PBRM1Q86U86 1689 aa31.03■■■□□ 2.56
CSNK1D-214ENST00000580565 TOP2BQ02880 1626 aa31.02■■■□□ 2.56
CSNK1D-214ENST00000580565 BIVM-ERCC5R4GMW8 1640 aa30.98■■■□□ 2.55
CSNK1D-214ENST00000580565 TRHP20396 242 aaPredicted RBP30.88■■■□□ 2.53
CSNK1D-214ENST00000580565 GRIN2AQ12879 1464 aa30.88■■■□□ 2.53
CSNK1D-214ENST00000580565 ADAMTS12P58397 1594 aa30.83■■■□□ 2.53
CSNK1D-214ENST00000580565 FHAD1B1AJZ9 1412 aa30.82■■■□□ 2.52
CSNK1D-214ENST00000580565 NUP160Q12769 1436 aa30.78■■■□□ 2.52
CSNK1D-214ENST00000580565 ERICH3Q5RHP9 1530 aa30.78■■■□□ 2.52
CSNK1D-214ENST00000580565 CEP170Q5SW79 1584 aa30.72■■■□□ 2.51
CSNK1D-214ENST00000580565 ERCC6L2Q5T890 1561 aa30.64■■■□□ 2.5
CSNK1D-214ENST00000580565 SHROOM2Q13796 1616 aa30.55■■■□□ 2.48
CSNK1D-214ENST00000580565 JPH4Q96JJ6 628 aa30.53■■■□□ 2.48
CSNK1D-214ENST00000580565 IGF1RP08069 1367 aa30.51■■■□□ 2.47
CSNK1D-214ENST00000580565 PRG4Q92954 1404 aaPredicted RBP30.5■■■□□ 2.47
CSNK1D-214ENST00000580565 KIF27Q86VH2 1401 aa30.49■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms