RNA–Protein interactions for RNA: ENST00000483150.1

RREB1-208, Transcript of ras responsive element binding protein 1, humanhuman

TSL 1 (best)

Gene RREB1, Length 2,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RREB1-208ENST00000483150 NISCHQ9Y2I1 1504 aa25.57■■□□□ 1.68
RREB1-208ENST00000483150 SHROOM4Q9ULL8 1493 aa21.83■■□□□ 1.09
RREB1-208ENST00000483150 CCDC180Q9P1Z9 1646 aa21.7■■□□□ 1.06
RREB1-208ENST00000483150 ZCCHC6Q5VYS8 1495 aaKnown RBP21.69■■□□□ 1.06
RREB1-208ENST00000483150 SUPT5HO00267 1087 aaKnown RBP21.52■■□□□ 1.04
RREB1-208ENST00000483150 MYO15BQ96JP2 1530 aa21.13■□□□□ 0.97
RREB1-208ENST00000483150 CHIC1Q5VXU3 224 aa21.11■□□□□ 0.97
RREB1-208ENST00000483150 DCAF1Q9Y4B6 1507 aa21.04■□□□□ 0.96
RREB1-208ENST00000483150 DCAF8L2P0C7V8 631 aa20.93■□□□□ 0.94
RREB1-208ENST00000483150 HRCP23327 699 aa20.91■□□□□ 0.94
RREB1-208ENST00000483150 PCGF6Q9BYE7 350 aa20.67■□□□□ 0.9
RREB1-208ENST00000483150 ABCC9O60706 1549 aa20.54■□□□□ 0.88
RREB1-208ENST00000483150 LOC105371045A0A1W2PR82 267 aa20.45■□□□□ 0.86
RREB1-208ENST00000483150 PPARGC1BQ86YN6 1023 aaKnown RBP20.35■□□□□ 0.85
RREB1-208ENST00000483150 RSF1Q96T23 1441 aaPredicted RBP20.3■□□□□ 0.84
RREB1-208ENST00000483150 SCRIBQ14160 1630 aa20.28■□□□□ 0.84
RREB1-208ENST00000483150 TRIM26Q12899 539 aaPredicted RBP20.28■□□□□ 0.84
RREB1-208ENST00000483150 RB1CC1Q8TDY2 1594 aa20.17■□□□□ 0.82
RREB1-208ENST00000483150 TRIM41Q8WV44 630 aa20.07■□□□□ 0.8
RREB1-208ENST00000483150 ZEB1P37275 1124 aaPredicted RBP19.97■□□□□ 0.79
RREB1-208ENST00000483150 NACADO15069 1562 aa19.96■□□□□ 0.79
RREB1-208ENST00000483150 CECR2Q9BXF3 1484 aa19.88■□□□□ 0.77
RREB1-208ENST00000483150 MROH2BQ7Z745 1585 aa19.87■□□□□ 0.77
RREB1-208ENST00000483150 FAM9AQ8IZU1 332 aaPredicted RBP19.85■□□□□ 0.77
RREB1-208ENST00000483150 WIZO95785 1651 aa19.8■□□□□ 0.76
RREB1-208ENST00000483150 BAZ1AQ9NRL2 1556 aaPredicted RBP19.73■□□□□ 0.75
RREB1-208ENST00000483150 EIF4G1Q04637 1599 aaKnown RBP19.7■□□□□ 0.74
RREB1-208ENST00000483150 EHMT2Q96KQ7 1210 aa19.62■□□□□ 0.73
RREB1-208ENST00000483150 TOP2AP11388 1531 aaKnown RBP19.5■□□□□ 0.71
RREB1-208ENST00000483150 SMARCA4P51532 1647 aa19.44■□□□□ 0.7
RREB1-208ENST00000483150 ABCC8Q09428 1581 aa19.41■□□□□ 0.7
RREB1-208ENST00000483150 WRNQ14191 1432 aaPredicted RBP eCLIP19.41■□□□□ 0.7
RREB1-208ENST00000483150 SMARCA2P51531 1590 aa19.4■□□□□ 0.7
RREB1-208ENST00000483150 CCDC88BA6NC98 1476 aa19.39■□□□□ 0.7
RREB1-208ENST00000483150 SCAF1Q9H7N4 1312 aaKnown RBP19.39■□□□□ 0.69
RREB1-208ENST00000483150 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.35■□□□□ 0.69
RREB1-208ENST00000483150 UNC13AQ9UPW8 1703 aa19.35■□□□□ 0.69
RREB1-208ENST00000483150 PELP1Q8IZL8 1130 aaKnown RBP19.34■□□□□ 0.69
RREB1-208ENST00000483150 CCER1Q8TC90 406 aaPredicted RBP19.33■□□□□ 0.69
RREB1-208ENST00000483150 CEP162Q5TB80 1403 aa19.31■□□□□ 0.68
RREB1-208ENST00000483150 TNIKQ9UKE5 1360 aa19.28■□□□□ 0.68
RREB1-208ENST00000483150 EEA1Q15075 1411 aa19.27■□□□□ 0.67
RREB1-208ENST00000483150 SOGA1O94964 1423 aa19.26■□□□□ 0.67
RREB1-208ENST00000483150 CSRNP3Q8WYN3 585 aa19.16■□□□□ 0.66
RREB1-208ENST00000483150 RUSC2Q8N2Y8 1516 aa19.15■□□□□ 0.66
RREB1-208ENST00000483150 ACIN1Q9UKV3 1341 aaKnown RBP19.14■□□□□ 0.66
RREB1-208ENST00000483150 GOLGA3Q08378 1498 aa19.12■□□□□ 0.65
RREB1-208ENST00000483150 DIEXFQ68CQ4 756 aaKnown RBP19.11■□□□□ 0.65
RREB1-208ENST00000483150 PEG3Q9GZU2 1588 aa19.09■□□□□ 0.65
RREB1-208ENST00000483150 TTBK1Q5TCY1 1321 aaPredicted RBP19.07■□□□□ 0.64
RREB1-208ENST00000483150 NEUROD1Q13562 356 aa19.07■□□□□ 0.64
RREB1-208ENST00000483150 UBTFP17480 764 aaKnown RBP19.06■□□□□ 0.64
RREB1-208ENST00000483150 BICRAQ9NZM4 1560 aa19.04■□□□□ 0.64
RREB1-208ENST00000483150 KIF21BO75037 1637 aa19.03■□□□□ 0.64
RREB1-208ENST00000483150 CENPBP07199 599 aaPredicted RBP18.99■□□□□ 0.63
RREB1-208ENST00000483150 CEP164Q9UPV0 1460 aa18.99■□□□□ 0.63
RREB1-208ENST00000483150 SYNJ1O43426 1573 aa18.99■□□□□ 0.63
RREB1-208ENST00000483150 ZNF316A6NFI3 1004 aaPredicted RBP18.93■□□□□ 0.62
RREB1-208ENST00000483150 GTF3C3Q9Y5Q9 886 aa18.9■□□□□ 0.62
RREB1-208ENST00000483150 BAZ1BQ9UIG0 1483 aaKnown RBP18.89■□□□□ 0.61
RREB1-208ENST00000483150 CLIP1P30622 1438 aa18.89■□□□□ 0.61
RREB1-208ENST00000483150 PABPN1Q86U42 306 aaKnown RBP eCLIP18.87■□□□□ 0.61
RREB1-208ENST00000483150 VPS8Q8N3P4 1428 aa18.87■□□□□ 0.61
RREB1-208ENST00000483150 ATAD2BQ9ULI0 1458 aa18.84■□□□□ 0.61
RREB1-208ENST00000483150 RAPGEF2Q9Y4G8 1499 aa18.79■□□□□ 0.6
RREB1-208ENST00000483150 HNRNPUL2Q1KMD3 747 aaKnown RBP18.77■□□□□ 0.6
RREB1-208ENST00000483150 TOP2BQ02880 1626 aa18.76■□□□□ 0.59
RREB1-208ENST00000483150 BIVM-ERCC5R4GMW8 1640 aa18.72■□□□□ 0.59
RREB1-208ENST00000483150 APLP2Q06481 763 aa18.7■□□□□ 0.58
RREB1-208ENST00000483150 ERICH3Q5RHP9 1530 aa18.67■□□□□ 0.58
RREB1-208ENST00000483150 MIER1Q8N108 512 aa18.66■□□□□ 0.58
RREB1-208ENST00000483150 PRXQ9BXM0 1461 aa18.62■□□□□ 0.57
RREB1-208ENST00000483150 YTHDC1Q96MU7 727 aaKnown RBP18.61■□□□□ 0.57
RREB1-208ENST00000483150 CLSPNQ9HAW4 1339 aa18.6■□□□□ 0.57
RREB1-208ENST00000483150 ARAP1Q96P48 1450 aa18.59■□□□□ 0.57
RREB1-208ENST00000483150 RANGAP1P46060 587 aaPredicted RBP18.54■□□□□ 0.56
RREB1-208ENST00000483150 DHX57Q6P158 1386 aaKnown RBP18.54■□□□□ 0.56
RREB1-208ENST00000483150 HMGXB3Q12766 1538 aa18.5■□□□□ 0.55
RREB1-208ENST00000483150 CUX1P39880 1505 aa18.49■□□□□ 0.55
RREB1-208ENST00000483150 RRBP1Q9P2E9 1410 aaKnown RBP18.48■□□□□ 0.55
RREB1-208ENST00000483150 KANK4Q5T7N3 995 aaPredicted RBP18.45■□□□□ 0.54
RREB1-208ENST00000483150 CUX2O14529 1486 aa18.45■□□□□ 0.54
RREB1-208ENST00000483150 NCAPD3P42695 1498 aa18.45■□□□□ 0.54
RREB1-208ENST00000483150 KIF27Q86VH2 1401 aa18.44■□□□□ 0.54
RREB1-208ENST00000483150 MYT1Q01538 1121 aa18.44■□□□□ 0.54
RREB1-208ENST00000483150 ARHGAP35Q9NRY4 1499 aa18.38■□□□□ 0.53
RREB1-208ENST00000483150 CFTRP13569 1480 aa18.37■□□□□ 0.53
RREB1-208ENST00000483150 CCNB3Q8WWL7 1395 aa18.35■□□□□ 0.53
RREB1-208ENST00000483150 PRDM2Q13029 1718 aa18.34■□□□□ 0.53
RREB1-208ENST00000483150 MAP3K1Q13233 1512 aa18.29■□□□□ 0.52
RREB1-208ENST00000483150 TIAM1Q13009 1591 aa18.26■□□□□ 0.51
RREB1-208ENST00000483150 MAPKBP1O60336 1514 aa18.22■□□□□ 0.51
RREB1-208ENST00000483150 IGF1RP08069 1367 aa18.21■□□□□ 0.51
RREB1-208ENST00000483150 RAB3GAP2Q9H2M9 1393 aa18.2■□□□□ 0.5
RREB1-208ENST00000483150 SUPT16HQ9Y5B9 1047 aaKnown RBP18.18■□□□□ 0.5
RREB1-208ENST00000483150 LRRC9Q6ZRR7 1453 aa18.16■□□□□ 0.5
RREB1-208ENST00000483150 ITGAEP38570 1179 aa18.15■□□□□ 0.5
RREB1-208ENST00000483150 CFAP43Q8NDM7 1665 aa18.15■□□□□ 0.5
RREB1-208ENST00000483150 SETD5Q9C0A6 1442 aa18.14■□□□□ 0.49
RREB1-208ENST00000483150 CARMIL1Q5VZK9 1371 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms