RNA–Protein interactions for RNA: ENST00000420330.1

AC009404.1-201, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 3,090 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-201ENST00000420330 NISCHQ9Y2I1 1504 aa14.55□□□□□ -0.08
AC009404.1-201ENST00000420330 AEBP2Q6ZN18 517 aaPredicted RBP13.5□□□□□ -0.25
AC009404.1-201ENST00000420330 CCDC180Q9P1Z9 1646 aa13.09□□□□□ -0.31
AC009404.1-201ENST00000420330 CHIC1Q5VXU3 224 aa13.06□□□□□ -0.32
AC009404.1-201ENST00000420330 ABCC9O60706 1549 aa12.88□□□□□ -0.35
AC009404.1-201ENST00000420330 RB1CC1Q8TDY2 1594 aa12.39□□□□□ -0.43
AC009404.1-201ENST00000420330 NACADO15069 1562 aa12.34□□□□□ -0.43
AC009404.1-201ENST00000420330 POTEDQ86YR6 584 aa12.26□□□□□ -0.45
AC009404.1-201ENST00000420330 MYO15BQ96JP2 1530 aa12.23□□□□□ -0.45
AC009404.1-201ENST00000420330 DCAF8L2P0C7V8 631 aa12.11□□□□□ -0.47
AC009404.1-201ENST00000420330 SENP3Q9H4L4 574 aaPredicted RBP12.11□□□□□ -0.47
AC009404.1-201ENST00000420330 ZCCHC6Q5VYS8 1495 aaKnown RBP12.1□□□□□ -0.47
AC009404.1-201ENST00000420330 DCAF1Q9Y4B6 1507 aa12.1□□□□□ -0.47
AC009404.1-201ENST00000420330 UNC13AQ9UPW8 1703 aa12.05□□□□□ -0.48
AC009404.1-201ENST00000420330 BICRAQ9NZM4 1560 aa11.98□□□□□ -0.49
AC009404.1-201ENST00000420330 PABPN1Q86U42 306 aaKnown RBP eCLIP11.95□□□□□ -0.5
AC009404.1-201ENST00000420330 SHROOM4Q9ULL8 1493 aa11.95□□□□□ -0.5
AC009404.1-201ENST00000420330 DNAJC5BQ9UF47 199 aa11.94□□□□□ -0.5
AC009404.1-201ENST00000420330 SCRIBQ14160 1630 aa11.84□□□□□ -0.51
AC009404.1-201ENST00000420330 EIF4G1Q04637 1599 aaKnown RBP11.69□□□□□ -0.54
AC009404.1-201ENST00000420330 CC2D2AQ9P2K1 1620 aa11.68□□□□□ -0.54
AC009404.1-201ENST00000420330 CECR2Q9BXF3 1484 aa11.63□□□□□ -0.55
AC009404.1-201ENST00000420330 PHF23Q9BUL5 403 aaPredicted RBP11.55□□□□□ -0.56
AC009404.1-201ENST00000420330 NCAPD3P42695 1498 aa11.36□□□□□ -0.59
AC009404.1-201ENST00000420330 SMARCA4P51532 1647 aa11.34□□□□□ -0.59
AC009404.1-201ENST00000420330 SMARCA2P51531 1590 aa11.33□□□□□ -0.6
AC009404.1-201ENST00000420330 ATAD2BQ9ULI0 1458 aa11.32□□□□□ -0.6
AC009404.1-201ENST00000420330 BAZ1AQ9NRL2 1556 aaPredicted RBP11.32□□□□□ -0.6
AC009404.1-201ENST00000420330 HMGXB3Q12766 1538 aa11.31□□□□□ -0.6
AC009404.1-201ENST00000420330 PEG3Q9GZU2 1588 aa11.27□□□□□ -0.61
AC009404.1-201ENST00000420330 BAZ1BQ9UIG0 1483 aaKnown RBP11.22□□□□□ -0.61
AC009404.1-201ENST00000420330 MSH5O43196 834 aa11.18□□□□□ -0.62
AC009404.1-201ENST00000420330 MROH2BQ7Z745 1585 aa11.18□□□□□ -0.62
AC009404.1-201ENST00000420330 CUX2O14529 1486 aa11.16□□□□□ -0.62
AC009404.1-201ENST00000420330 ERCC6Q03468 1493 aa11.15□□□□□ -0.62
AC009404.1-201ENST00000420330 PELP1Q8IZL8 1130 aaKnown RBP11.11□□□□□ -0.63
AC009404.1-201ENST00000420330 LAMC3Q9Y6N6 1575 aa11.11□□□□□ -0.63
AC009404.1-201ENST00000420330 FOXD1Q16676 465 aa11.1□□□□□ -0.63
AC009404.1-201ENST00000420330 NESP48681 1621 aa11.07□□□□□ -0.64
AC009404.1-201ENST00000420330 WIZO95785 1651 aa11.04□□□□□ -0.64
AC009404.1-201ENST00000420330 PDS5BQ9NTI5 1447 aa11.03□□□□□ -0.64
AC009404.1-201ENST00000420330 THOC2Q8NI27 1593 aaKnown RBP11.02□□□□□ -0.65
AC009404.1-201ENST00000420330 CADPSQ9ULU8 1353 aa11□□□□□ -0.65
AC009404.1-201ENST00000420330 RSF1Q96T23 1441 aaPredicted RBP10.99□□□□□ -0.65
AC009404.1-201ENST00000420330 KIF21AQ7Z4S6 1674 aa10.97□□□□□ -0.65
AC009404.1-201ENST00000420330 TOP2AP11388 1531 aaKnown RBP10.97□□□□□ -0.65
AC009404.1-201ENST00000420330 DNAJC5Q9H3Z4 198 aa10.97□□□□□ -0.65
AC009404.1-201ENST00000420330 MRC2Q9UBG0 1479 aa10.92□□□□□ -0.66
AC009404.1-201ENST00000420330 HRCP23327 699 aa10.92□□□□□ -0.66
AC009404.1-201ENST00000420330 CFTRP13569 1480 aa10.9□□□□□ -0.66
AC009404.1-201ENST00000420330 WDR62O43379 1518 aa10.9□□□□□ -0.66
AC009404.1-201ENST00000420330 CEP164Q9UPV0 1460 aa10.89□□□□□ -0.67
AC009404.1-201ENST00000420330 MYT1Q01538 1121 aa10.88□□□□□ -0.67
AC009404.1-201ENST00000420330 FANCD2Q9BXW9 1451 aa10.87□□□□□ -0.67
AC009404.1-201ENST00000420330 PRDM2Q13029 1718 aa10.84□□□□□ -0.67
AC009404.1-201ENST00000420330 CCDC88BA6NC98 1476 aa10.8□□□□□ -0.68
AC009404.1-201ENST00000420330 URB2Q14146 1524 aaKnown RBP10.76□□□□□ -0.69
AC009404.1-201ENST00000420330 ABCC8Q09428 1581 aa10.72□□□□□ -0.69
AC009404.1-201ENST00000420330 IFT140Q96RY7 1462 aa10.69□□□□□ -0.7
AC009404.1-201ENST00000420330 PPARGC1BQ86YN6 1023 aaKnown RBP10.68□□□□□ -0.7
AC009404.1-201ENST00000420330 TOPBP1Q92547 1522 aa10.68□□□□□ -0.7
AC009404.1-201ENST00000420330 DNMBPQ6XZF7 1577 aa10.67□□□□□ -0.7
AC009404.1-201ENST00000420330 ZNF608Q9ULD9 1512 aaPredicted RBP10.59□□□□□ -0.71
AC009404.1-201ENST00000420330 OSCARQ8IYS5 282 aa10.59□□□□□ -0.71
AC009404.1-201ENST00000420330 SCAF1Q9H7N4 1312 aaKnown RBP10.59□□□□□ -0.71
AC009404.1-201ENST00000420330 EIF4G3O43432 1585 aaKnown RBP10.58□□□□□ -0.72
AC009404.1-201ENST00000420330 TARBP1Q13395 1621 aaKnown RBP10.58□□□□□ -0.72
AC009404.1-201ENST00000420330 WDR97A6NE52 1622 aa10.57□□□□□ -0.72
AC009404.1-201ENST00000420330 POLA1P09884 1462 aaPredicted RBP10.57□□□□□ -0.72
AC009404.1-201ENST00000420330 FGD5Q6ZNL6 1462 aa10.51□□□□□ -0.73
AC009404.1-201ENST00000420330 CUX1P39880 1505 aa10.51□□□□□ -0.73
AC009404.1-201ENST00000420330 SOGA1O94964 1423 aa10.51□□□□□ -0.73
AC009404.1-201ENST00000420330 AQRO60306 1485 aaKnown RBP eCLIP10.5□□□□□ -0.73
AC009404.1-201ENST00000420330 RAD54L2Q9Y4B4 1467 aa10.49□□□□□ -0.73
AC009404.1-201ENST00000420330 SUPT5HO00267 1087 aaKnown RBP10.47□□□□□ -0.73
AC009404.1-201ENST00000420330 CHD1O14646 1710 aa10.47□□□□□ -0.73
AC009404.1-201ENST00000420330 TRIM41Q8WV44 630 aa10.47□□□□□ -0.73
AC009404.1-201ENST00000420330 RIMBP3CA6NJZ7 1639 aa10.46□□□□□ -0.73
AC009404.1-201ENST00000420330 RIMBP3BA6NNM3 1639 aa10.46□□□□□ -0.73
AC009404.1-201ENST00000420330 RIMBP3Q9UFD9 1639 aa10.46□□□□□ -0.73
AC009404.1-201ENST00000420330 MAGI1Q96QZ7 1491 aaPredicted RBP10.45□□□□□ -0.74
AC009404.1-201ENST00000420330 GRIN2BQ13224 1484 aa10.44□□□□□ -0.74
AC009404.1-201ENST00000420330 TDRD9Q8NDG6 1382 aaKnown RBP10.44□□□□□ -0.74
AC009404.1-201ENST00000420330 ARHGEF11O15085 1522 aa10.44□□□□□ -0.74
AC009404.1-201ENST00000420330 SNAPC4Q5SXM2 1469 aa10.43□□□□□ -0.74
AC009404.1-201ENST00000420330 TTBK1Q5TCY1 1321 aaPredicted RBP10.43□□□□□ -0.74
AC009404.1-201ENST00000420330 ABCA10Q8WWZ4 1543 aa10.43□□□□□ -0.74
AC009404.1-201ENST00000420330 BIVM-ERCC5R4GMW8 1640 aa10.41□□□□□ -0.74
AC009404.1-201ENST00000420330 ABCA5Q8WWZ7 1642 aa10.41□□□□□ -0.74
AC009404.1-201ENST00000420330 PBRM1Q86U86 1689 aa10.41□□□□□ -0.74
AC009404.1-201ENST00000420330 SYNJ1O43426 1573 aa10.4□□□□□ -0.74
AC009404.1-201ENST00000420330 PCGF6Q9BYE7 350 aa10.4□□□□□ -0.74
AC009404.1-201ENST00000420330 SYNJ2O15056 1496 aa10.4□□□□□ -0.74
AC009404.1-201ENST00000420330 GAPVD1Q14C86 1478 aa10.4□□□□□ -0.74
AC009404.1-201ENST00000420330 TOP2BQ02880 1626 aa10.4□□□□□ -0.74
AC009404.1-201ENST00000420330 CLASP1Q7Z460 1538 aa10.39□□□□□ -0.75
AC009404.1-201ENST00000420330 WRNQ14191 1432 aaPredicted RBP eCLIP10.39□□□□□ -0.75
AC009404.1-201ENST00000420330 FBLN2P98095 1184 aa10.38□□□□□ -0.75
AC009404.1-201ENST00000420330 CHMP7Q8WUX9 453 aaPredicted RBP10.36□□□□□ -0.75
AC009404.1-201ENST00000420330 ARAP1Q96P48 1450 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms