RNA–Protein interactions for RNA: ENST00000505500.5

CCNB1-203, Transcript of cyclin B1, humanhuman

TSL 1 (best)

Gene CCNB1, Length 1,190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1-203ENST00000505500 AEBP2Q6ZN18 517 aaPredicted RBP19.25■□□□□ 0.67
CCNB1-203ENST00000505500 NISCHQ9Y2I1 1504 aa18.79■□□□□ 0.6
CCNB1-203ENST00000505500 CHIC1Q5VXU3 224 aa18.33■□□□□ 0.52
CCNB1-203ENST00000505500 CCDC180Q9P1Z9 1646 aa17.02■□□□□ 0.31
CCNB1-203ENST00000505500 ABCC9O60706 1549 aa16.66■□□□□ 0.26
CCNB1-203ENST00000505500 SENP3Q9H4L4 574 aaPredicted RBP16.37■□□□□ 0.21
CCNB1-203ENST00000505500 PHF23Q9BUL5 403 aaPredicted RBP16.19■□□□□ 0.18
CCNB1-203ENST00000505500 RB1CC1Q8TDY2 1594 aa16.03■□□□□ 0.16
CCNB1-203ENST00000505500 NACADO15069 1562 aa15.94■□□□□ 0.14
CCNB1-203ENST00000505500 UNC13AQ9UPW8 1703 aa15.85■□□□□ 0.13
CCNB1-203ENST00000505500 MYO15BQ96JP2 1530 aa15.78■□□□□ 0.12
CCNB1-203ENST00000505500 ZCCHC6Q5VYS8 1495 aaKnown RBP15.63■□□□□ 0.09
CCNB1-203ENST00000505500 DCAF1Q9Y4B6 1507 aa15.6■□□□□ 0.09
CCNB1-203ENST00000505500 BICRAQ9NZM4 1560 aa15.58■□□□□ 0.08
CCNB1-203ENST00000505500 DCAF8L2P0C7V8 631 aa15.5■□□□□ 0.07
CCNB1-203ENST00000505500 DNAJC5BQ9UF47 199 aa15.45■□□□□ 0.06
CCNB1-203ENST00000505500 SHROOM4Q9ULL8 1493 aa15.42■□□□□ 0.06
CCNB1-203ENST00000505500 PABPN1Q86U42 306 aaKnown RBP eCLIP15.38■□□□□ 0.05
CCNB1-203ENST00000505500 SCRIBQ14160 1630 aa15.35■□□□□ 0.05
CCNB1-203ENST00000505500 FOXD1Q16676 465 aa15.29■□□□□ 0.04
CCNB1-203ENST00000505500 CC2D2AQ9P2K1 1620 aa15.17■□□□□ 0.02
CCNB1-203ENST00000505500 EIF4G1Q04637 1599 aaKnown RBP15.15■□□□□ 0.02
CCNB1-203ENST00000505500 CECR2Q9BXF3 1484 aa15.01□□□□□ -0.01
CCNB1-203ENST00000505500 SMARCA4P51532 1647 aa14.7□□□□□ -0.06
CCNB1-203ENST00000505500 PLPPR3Q6T4P5 718 aa14.65□□□□□ -0.06
CCNB1-203ENST00000505500 HMGXB3Q12766 1538 aa14.64□□□□□ -0.07
CCNB1-203ENST00000505500 SMARCA2P51531 1590 aa14.64□□□□□ -0.07
CCNB1-203ENST00000505500 NCAPD3P42695 1498 aa14.63□□□□□ -0.07
CCNB1-203ENST00000505500 BAZ1AQ9NRL2 1556 aaPredicted RBP14.61□□□□□ -0.07
CCNB1-203ENST00000505500 ATAD2BQ9ULI0 1458 aa14.6□□□□□ -0.07
CCNB1-203ENST00000505500 PEG3Q9GZU2 1588 aa14.6□□□□□ -0.07
CCNB1-203ENST00000505500 BAZ1BQ9UIG0 1483 aaKnown RBP14.46□□□□□ -0.09
CCNB1-203ENST00000505500 MROH2BQ7Z745 1585 aa14.45□□□□□ -0.1
CCNB1-203ENST00000505500 CUX2O14529 1486 aa14.42□□□□□ -0.1
CCNB1-203ENST00000505500 LAMC3Q9Y6N6 1575 aa14.39□□□□□ -0.11
CCNB1-203ENST00000505500 ERCC6Q03468 1493 aa14.38□□□□□ -0.11
CCNB1-203ENST00000505500 THOC2Q8NI27 1593 aaKnown RBP14.36□□□□□ -0.11
CCNB1-203ENST00000505500 KIF21AQ7Z4S6 1674 aa14.36□□□□□ -0.11
CCNB1-203ENST00000505500 NESP48681 1621 aa14.35□□□□□ -0.11
CCNB1-203ENST00000505500 PPP6R1Q9UPN7 881 aa14.35□□□□□ -0.11
CCNB1-203ENST00000505500 WIZO95785 1651 aa14.35□□□□□ -0.11
CCNB1-203ENST00000505500 ADRA2BP18089 450 aa14.29□□□□□ -0.12
CCNB1-203ENST00000505500 PIAS4Q8N2W9 510 aaPredicted RBP14.25□□□□□ -0.13
CCNB1-203ENST00000505500 MSH5O43196 834 aa14.24□□□□□ -0.13
CCNB1-203ENST00000505500 PRDM2Q13029 1718 aa14.22□□□□□ -0.13
CCNB1-203ENST00000505500 PDS5BQ9NTI5 1447 aa14.17□□□□□ -0.14
CCNB1-203ENST00000505500 TOP2AP11388 1531 aaKnown RBP14.17□□□□□ -0.14
CCNB1-203ENST00000505500 DNAJC5Q9H3Z4 198 aa14.15□□□□□ -0.14
CCNB1-203ENST00000505500 CADPSQ9ULU8 1353 aa14.13□□□□□ -0.15
CCNB1-203ENST00000505500 WDR62O43379 1518 aa14.13□□□□□ -0.15
CCNB1-203ENST00000505500 RSF1Q96T23 1441 aaPredicted RBP14.13□□□□□ -0.15
CCNB1-203ENST00000505500 MRC2Q9UBG0 1479 aa14.1□□□□□ -0.15
CCNB1-203ENST00000505500 CEP164Q9UPV0 1460 aa14.06□□□□□ -0.16
CCNB1-203ENST00000505500 CFTRP13569 1480 aa14.06□□□□□ -0.16
CCNB1-203ENST00000505500 FANCD2Q9BXW9 1451 aa14.02□□□□□ -0.16
CCNB1-203ENST00000505500 POTEDQ86YR6 584 aa13.93□□□□□ -0.18
CCNB1-203ENST00000505500 URB2Q14146 1524 aaKnown RBP13.93□□□□□ -0.18
CCNB1-203ENST00000505500 CCDC88BA6NC98 1476 aa13.91□□□□□ -0.18
CCNB1-203ENST00000505500 DNMBPQ6XZF7 1577 aa13.81□□□□□ -0.2
CCNB1-203ENST00000505500 TOPBP1Q92547 1522 aa13.8□□□□□ -0.2
CCNB1-203ENST00000505500 ABCC8Q09428 1581 aa13.78□□□□□ -0.2
CCNB1-203ENST00000505500 EIF4G3O43432 1585 aaKnown RBP13.77□□□□□ -0.21
CCNB1-203ENST00000505500 IFT140Q96RY7 1462 aa13.76□□□□□ -0.21
CCNB1-203ENST00000505500 TARBP1Q13395 1621 aaKnown RBP13.75□□□□□ -0.21
CCNB1-203ENST00000505500 CHD1O14646 1710 aa13.7□□□□□ -0.22
CCNB1-203ENST00000505500 ZNF608Q9ULD9 1512 aaPredicted RBP13.7□□□□□ -0.22
CCNB1-203ENST00000505500 WDR97A6NE52 1622 aa13.68□□□□□ -0.22
CCNB1-203ENST00000505500 POLA1P09884 1462 aaPredicted RBP13.66□□□□□ -0.22
CCNB1-203ENST00000505500 RIMBP3CA6NJZ7 1639 aa13.63□□□□□ -0.23
CCNB1-203ENST00000505500 RIMBP3BA6NNM3 1639 aa13.63□□□□□ -0.23
CCNB1-203ENST00000505500 RIMBP3Q9UFD9 1639 aa13.63□□□□□ -0.23
CCNB1-203ENST00000505500 PBRM1Q86U86 1689 aa13.59□□□□□ -0.23
CCNB1-203ENST00000505500 CUX1P39880 1505 aa13.59□□□□□ -0.23
CCNB1-203ENST00000505500 OSCARQ8IYS5 282 aa13.58□□□□□ -0.24
CCNB1-203ENST00000505500 FGD5Q6ZNL6 1462 aa13.57□□□□□ -0.24
CCNB1-203ENST00000505500 AQRO60306 1485 aaKnown RBP eCLIP13.54□□□□□ -0.243e-8■■■■□ 23.5
CCNB1-203ENST00000505500 RAD54L2Q9Y4B4 1467 aa13.54□□□□□ -0.24
CCNB1-203ENST00000505500 ARHGEF11O15085 1522 aa13.54□□□□□ -0.24
CCNB1-203ENST00000505500 ABCA5Q8WWZ7 1642 aa13.52□□□□□ -0.25
CCNB1-203ENST00000505500 BIVM-ERCC5R4GMW8 1640 aa13.52□□□□□ -0.25
CCNB1-203ENST00000505500 SOGA1O94964 1423 aa13.5□□□□□ -0.25
CCNB1-203ENST00000505500 MAGI1Q96QZ7 1491 aaPredicted RBP13.48□□□□□ -0.25
CCNB1-203ENST00000505500 TRIM41Q8WV44 630 aa13.48□□□□□ -0.25
CCNB1-203ENST00000505500 CLASP1Q7Z460 1538 aa13.48□□□□□ -0.25
CCNB1-203ENST00000505500 SNAPC4Q5SXM2 1469 aa13.47□□□□□ -0.25
CCNB1-203ENST00000505500 SYNJ1O43426 1573 aa13.46□□□□□ -0.25
CCNB1-203ENST00000505500 TOP2BQ02880 1626 aa13.46□□□□□ -0.26
CCNB1-203ENST00000505500 ABCA10Q8WWZ4 1543 aa13.45□□□□□ -0.26
CCNB1-203ENST00000505500 GRIN2BQ13224 1484 aa13.44□□□□□ -0.26
CCNB1-203ENST00000505500 TDRD9Q8NDG6 1382 aaKnown RBP13.43□□□□□ -0.26
CCNB1-203ENST00000505500 SYNJ2O15056 1496 aa13.41□□□□□ -0.26
CCNB1-203ENST00000505500 GAPVD1Q14C86 1478 aa13.39□□□□□ -0.27
CCNB1-203ENST00000505500 ARAP1Q96P48 1450 aa13.39□□□□□ -0.27
CCNB1-203ENST00000505500 ADAMTS12P58397 1594 aa13.38□□□□□ -0.27
CCNB1-203ENST00000505500 SUPT5HO00267 1087 aaKnown RBP13.38□□□□□ -0.27
CCNB1-203ENST00000505500 WRNQ14191 1432 aaPredicted RBP eCLIP13.34□□□□□ -0.27
CCNB1-203ENST00000505500 ERICH3Q5RHP9 1530 aa13.31□□□□□ -0.28
CCNB1-203ENST00000505500 FBLN2P98095 1184 aa13.31□□□□□ -0.28
CCNB1-203ENST00000505500 SHROOM2Q13796 1616 aa13.3□□□□□ -0.28
CCNB1-203ENST00000505500 GRIN2AQ12879 1464 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms