RNA–Protein interactions for RNA: ENST00000496759.1

BRWD1-216, Transcript of bromodomain and WD repeat domain containing 1, humanhuman

TSL 3

Gene BRWD1, Length 377 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD1-216ENST00000496759 AEBP2Q6ZN18 517 aaPredicted RBP41.19■■■■■ 4.18
BRWD1-216ENST00000496759 CHIC1Q5VXU3 224 aa40.02■■■■■ 4
BRWD1-216ENST00000496759 SENP3Q9H4L4 574 aaPredicted RBP35.15■■■■□ 3.22
BRWD1-216ENST00000496759 PHF23Q9BUL5 403 aaPredicted RBP35.09■■■■□ 3.21
BRWD1-216ENST00000496759 FOXD1Q16676 465 aa32.56■■■□□ 2.8
BRWD1-216ENST00000496759 PLPPR3Q6T4P5 718 aa32.43■■■□□ 2.78
BRWD1-216ENST00000496759 PPP6R1Q9UPN7 881 aa31.05■■■□□ 2.56
BRWD1-216ENST00000496759 ADRA2BP18089 450 aa31.02■■■□□ 2.56
BRWD1-216ENST00000496759 PIAS4Q8N2W9 510 aaPredicted RBP30.68■■■□□ 2.5
BRWD1-216ENST00000496759 MSH5O43196 834 aa30.26■■■□□ 2.43
BRWD1-216ENST00000496759 SCAF1Q9H7N4 1312 aaKnown RBP28.56■■■□□ 2.16
BRWD1-216ENST00000496759 PPP4R3CPQ6ZMV5 832 aa28.48■■■□□ 2.15
BRWD1-216ENST00000496759 MAPK8IP2Q13387 824 aaPredicted RBP28.21■■■□□ 2.11
BRWD1-216ENST00000496759 POTEDQ86YR6 584 aa27.98■■■□□ 2.07
BRWD1-216ENST00000496759 DMRT2Q9Y5R5 561 aa27.97■■■□□ 2.07
BRWD1-216ENST00000496759 CNKSR2Q8WXI2 1034 aa27.8■■■□□ 2.04
BRWD1-216ENST00000496759 NCBP3Q53F19 620 aaKnown RBP27.74■■■□□ 2.03
BRWD1-216ENST00000496759 KCNA4P22459 653 aa27.44■■□□□ 1.98
BRWD1-216ENST00000496759 RNF216Q9NWF9 866 aaPredicted RBP27.33■■□□□ 1.97
BRWD1-216ENST00000496759 HOXD11P31277 338 aaPredicted RBP27.27■■□□□ 1.96
BRWD1-216ENST00000496759 NPM3O75607 178 aaKnown RBP27.23■■□□□ 1.95
BRWD1-216ENST00000496759 DCAF8L1A6NGE4 600 aa26.77■■□□□ 1.88
BRWD1-216ENST00000496759 DNAJC5BQ9UF47 199 aa26.57■■□□□ 1.84
BRWD1-216ENST00000496759 SLC4A1APQ9BWU0 796 aaKnown RBP26.13■■□□□ 1.77
BRWD1-216ENST00000496759 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.02■■□□□ 1.76
BRWD1-216ENST00000496759 RNF39Q9H2S5 420 aa25.84■■□□□ 1.73
BRWD1-216ENST00000496759 SLC4A2P04920 1241 aa25.75■■□□□ 1.71
BRWD1-216ENST00000496759 C1QBPQ07021 282 aaKnown RBP25.57■■□□□ 1.68
BRWD1-216ENST00000496759 U3KPZ7 1027 aaPredicted RBP25.5■■□□□ 1.67
BRWD1-216ENST00000496759 CACNB1Q02641 598 aaPredicted RBP25.4■■□□□ 1.66
BRWD1-216ENST00000496759 FOXD4L1Q9NU39 408 aa25.4■■□□□ 1.66
BRWD1-216ENST00000496759 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.23■■□□□ 1.63
BRWD1-216ENST00000496759 MYCNP04198 464 aaPredicted RBP25.23■■□□□ 1.63
BRWD1-216ENST00000496759 HNRNPUL2Q1KMD3 747 aaKnown RBP25.23■■□□□ 1.63
BRWD1-216ENST00000496759 ZBTB22O15209 634 aa25.19■■□□□ 1.62
BRWD1-216ENST00000496759 SAMD1Q6SPF0 538 aaPredicted RBP25.09■■□□□ 1.61
BRWD1-216ENST00000496759 APLP2Q06481 763 aa25.06■■□□□ 1.6
BRWD1-216ENST00000496759 EHMT2Q96KQ7 1210 aa24.99■■□□□ 1.59
BRWD1-216ENST00000496759 SPINK5Q9NQ38 1064 aaPredicted RBP24.85■■□□□ 1.57
BRWD1-216ENST00000496759 CSRNP3Q8WYN3 585 aa24.84■■□□□ 1.57
BRWD1-216ENST00000496759 CAPN15O75808 1086 aa24.83■■□□□ 1.57
BRWD1-216ENST00000496759 ZNF219Q9P2Y4 722 aaPredicted RBP24.69■■□□□ 1.54
BRWD1-216ENST00000496759 TRHP20396 242 aaPredicted RBP24.62■■□□□ 1.53
BRWD1-216ENST00000496759 ATXN8OSP0DMR3 200 aa24.6■■□□□ 1.53
BRWD1-216ENST00000496759 DSG3P32926 999 aa24.47■■□□□ 1.51
BRWD1-216ENST00000496759 ATF5Q9Y2D1 282 aaPredicted RBP24.45■■□□□ 1.5
BRWD1-216ENST00000496759 ABCB7O75027 752 aa24.28■■□□□ 1.48
BRWD1-216ENST00000496759 POLA2Q14181 598 aa24.17■■□□□ 1.46
BRWD1-216ENST00000496759 ZBTB12Q9Y330 459 aaPredicted RBP23.86■■□□□ 1.41
BRWD1-216ENST00000496759 FBLN2P98095 1184 aa23.6■■□□□ 1.37
BRWD1-216ENST00000496759 RBM42Q9BTD8 480 aaKnown RBP23.43■■□□□ 1.34
BRWD1-216ENST00000496759 MKRN4PQ13434 485 aaPredicted RBP23.4■■□□□ 1.34
BRWD1-216ENST00000496759 OSCARQ8IYS5 282 aa23.33■■□□□ 1.33
BRWD1-216ENST00000496759 SPDYE2BA6NHP3 402 aa23.14■■□□□ 1.29
BRWD1-216ENST00000496759 SPDYE6P0CI01 402 aa23.14■■□□□ 1.29
BRWD1-216ENST00000496759 SPDYE2Q495Y8 402 aa23.14■■□□□ 1.29
BRWD1-216ENST00000496759 AKT1S1Q96B36 256 aa23.04■■□□□ 1.28
BRWD1-216ENST00000496759 ZNF692Q9BU19 519 aaPredicted RBP22.98■■□□□ 1.27
BRWD1-216ENST00000496759 SSUH2Q9Y2M2 353 aa22.88■■□□□ 1.25
BRWD1-216ENST00000496759 SPDYE4A6NLX3 237 aa22.8■■□□□ 1.24
BRWD1-216ENST00000496759 REM2Q8IYK8 340 aaPredicted RBP22.77■■□□□ 1.24
BRWD1-216ENST00000496759 PABPN1Q86U42 306 aaKnown RBP eCLIP22.64■■□□□ 1.21
BRWD1-216ENST00000496759 SPDYE1Q8NFV5 336 aaPredicted RBP22.54■■□□□ 1.2
BRWD1-216ENST00000496759 FKBP8Q14318 412 aa22.51■■□□□ 1.19
BRWD1-216ENST00000496759 CHRDL2Q6WN34 429 aa22.5■■□□□ 1.19
BRWD1-216ENST00000496759 PITPNM1O00562 1244 aa22.49■■□□□ 1.19
BRWD1-216ENST00000496759 CLEC11AQ9Y240 323 aa22.4■■□□□ 1.18
BRWD1-216ENST00000496759 PROM2Q8N271 834 aa22.37■■□□□ 1.17
BRWD1-216ENST00000496759 STAG3Q9UJ98 1225 aa22.3■■□□□ 1.16
BRWD1-216ENST00000496759 PRR29P0C7W0 189 aa22.19■■□□□ 1.14
BRWD1-216ENST00000496759 FXR2P51116 673 aaKnown RBP eCLIP22.15■■□□□ 1.14
BRWD1-216ENST00000496759 POTEHQ6S545 545 aa22.13■■□□□ 1.13
BRWD1-216ENST00000496759 PIP4P2Q8N4L2 257 aa22.12■■□□□ 1.13
BRWD1-216ENST00000496759 PRKAR2AP13861 404 aaKnown RBP21.95■■□□□ 1.1
BRWD1-216ENST00000496759 FBXO3Q9UK99 471 aa21.91■■□□□ 1.1
BRWD1-216ENST00000496759 CHADLQ6NUI6 762 aa21.82■■□□□ 1.08
BRWD1-216ENST00000496759 CREBZFQ9NS37 354 aa21.77■■□□□ 1.08
BRWD1-216ENST00000496759 PLEKHG5O94827 1062 aa21.69■■□□□ 1.06
BRWD1-216ENST00000496759 MIER1Q8N108 512 aa21.68■■□□□ 1.06
BRWD1-216ENST00000496759 FARP1Q9Y4F1 1045 aaPredicted RBP21.65■■□□□ 1.06
BRWD1-216ENST00000496759 PLCD3Q8N3E9 789 aa21.62■■□□□ 1.05
BRWD1-216ENST00000496759 HAX1O00165 279 aa21.53■■□□□ 1.04
BRWD1-216ENST00000496759 VASPP50552 380 aaPredicted RBP21.53■■□□□ 1.04
BRWD1-216ENST00000496759 NPM1P06748 294 aaKnown RBP eCLIP21.51■■□□□ 1.03
BRWD1-216ENST00000496759 MNX1P50219 401 aaPredicted RBP21.5■■□□□ 1.03
BRWD1-216ENST00000496759 ZBTB47Q9UFB7 747 aaPredicted RBP21.48■■□□□ 1.03
BRWD1-216ENST00000496759 C19orf67A6NJJ6 358 aa21.4■■□□□ 1.02
BRWD1-216ENST00000496759 CD44P16070 742 aaKnown RBP21.31■■□□□ 1
BRWD1-216ENST00000496759 KLHL34Q8N239 644 aa21.26■□□□□ 0.99
BRWD1-216ENST00000496759 PAK3O75914 559 aaPredicted RBP21.24■□□□□ 0.99
BRWD1-216ENST00000496759 EVX2Q03828 476 aa21.21■□□□□ 0.99
BRWD1-216ENST00000496759 IFNLR1Q8IU57 520 aaPredicted RBP21.17■□□□□ 0.98
BRWD1-216ENST00000496759 SP7Q8TDD2 431 aaPredicted RBP21.16■□□□□ 0.98
BRWD1-216ENST00000496759 ZRANB1Q9UGI0 708 aa21.14■□□□□ 0.97
BRWD1-216ENST00000496759 NUBP1P53384 320 aa21.11■□□□□ 0.97
BRWD1-216ENST00000496759 RASEFQ8IZ41 740 aa21.07■□□□□ 0.96
BRWD1-216ENST00000496759 TSPYL2Q9H2G4 693 aaPredicted RBP21.06■□□□□ 0.96
BRWD1-216ENST00000496759 SPOCK2Q92563 424 aa21.04■□□□□ 0.96
BRWD1-216ENST00000496759 ZNF579Q8NAF0 562 aaKnown RBP21.03■□□□□ 0.96
BRWD1-216ENST00000496759 FAM212AQ96EL1 285 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms