RNA–Protein interactions for RNA: ENST00000487866.5

ECHDC2-215, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 5

Gene ECHDC2, Length 940 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-215ENST00000487866 NISCHQ9Y2I1 1504 aa36.97■■■■□ 3.51
ECHDC2-215ENST00000487866 CCDC180Q9P1Z9 1646 aa32.91■■■□□ 2.86
ECHDC2-215ENST00000487866 ABCC9O60706 1549 aa32.13■■■□□ 2.73
ECHDC2-215ENST00000487866 RB1CC1Q8TDY2 1594 aa30.89■■■□□ 2.54
ECHDC2-215ENST00000487866 NACADO15069 1562 aa30.88■■■□□ 2.53
ECHDC2-215ENST00000487866 ZCCHC6Q5VYS8 1495 aaKnown RBP30.81■■■□□ 2.52
ECHDC2-215ENST00000487866 MYO15BQ96JP2 1530 aa30.74■■■□□ 2.51
ECHDC2-215ENST00000487866 DCAF8L2P0C7V8 631 aa30.72■■■□□ 2.51
ECHDC2-215ENST00000487866 DCAF1Q9Y4B6 1507 aa30.63■■■□□ 2.49
ECHDC2-215ENST00000487866 DNAJC5BQ9UF47 199 aa30.5■■■□□ 2.47
ECHDC2-215ENST00000487866 UNC13AQ9UPW8 1703 aa30.33■■■□□ 2.45
ECHDC2-215ENST00000487866 BICRAQ9NZM4 1560 aa30.02■■■□□ 2.4
ECHDC2-215ENST00000487866 SCRIBQ14160 1630 aa29.95■■■□□ 2.38
ECHDC2-215ENST00000487866 PABPN1Q86U42 306 aaKnown RBP eCLIP29.92■■■□□ 2.385e-7■□□□□ 10.9
ECHDC2-215ENST00000487866 SHROOM4Q9ULL8 1493 aa29.66■■■□□ 2.34
ECHDC2-215ENST00000487866 EIF4G1Q04637 1599 aaKnown RBP29.18■■■□□ 2.26
ECHDC2-215ENST00000487866 CC2D2AQ9P2K1 1620 aa29.05■■■□□ 2.24
ECHDC2-215ENST00000487866 CECR2Q9BXF3 1484 aa29.01■■■□□ 2.23
ECHDC2-215ENST00000487866 SMARCA4P51532 1647 aa28.7■■■□□ 2.19
ECHDC2-215ENST00000487866 BAZ1AQ9NRL2 1556 aaPredicted RBP28.64■■■□□ 2.18
ECHDC2-215ENST00000487866 MROH2BQ7Z745 1585 aa28.5■■■□□ 2.15
ECHDC2-215ENST00000487866 NCAPD3P42695 1498 aa28.49■■■□□ 2.15
ECHDC2-215ENST00000487866 ATAD2BQ9ULI0 1458 aa28.49■■■□□ 2.15
ECHDC2-215ENST00000487866 SMARCA2P51531 1590 aa28.46■■■□□ 2.15
ECHDC2-215ENST00000487866 PEG3Q9GZU2 1588 aa28.45■■■□□ 2.14
ECHDC2-215ENST00000487866 DNAJC5Q9H3Z4 198 aa28.38■■■□□ 2.13
ECHDC2-215ENST00000487866 HMGXB3Q12766 1538 aa28.37■■■□□ 2.13
ECHDC2-215ENST00000487866 BAZ1BQ9UIG0 1483 aaKnown RBP28.23■■■□□ 2.11
ECHDC2-215ENST00000487866 WIZO95785 1651 aa28.22■■■□□ 2.11
ECHDC2-215ENST00000487866 RSF1Q96T23 1441 aaPredicted RBP28.17■■■□□ 2.1
ECHDC2-215ENST00000487866 CUX2O14529 1486 aa27.91■■■□□ 2.06
ECHDC2-215ENST00000487866 TOP2AP11388 1531 aaKnown RBP27.88■■■□□ 2.05
ECHDC2-215ENST00000487866 ERCC6Q03468 1493 aa27.81■■■□□ 2.04
ECHDC2-215ENST00000487866 NESP48681 1621 aa27.78■■■□□ 2.04
ECHDC2-215ENST00000487866 LAMC3Q9Y6N6 1575 aa27.74■■■□□ 2.03
ECHDC2-215ENST00000487866 CADPSQ9ULU8 1353 aa27.62■■■□□ 2.01
ECHDC2-215ENST00000487866 CCDC88BA6NC98 1476 aa27.55■■■□□ 2
ECHDC2-215ENST00000487866 KIF21AQ7Z4S6 1674 aa27.52■■■□□ 2
ECHDC2-215ENST00000487866 CFTRP13569 1480 aa27.51■■□□□ 1.99
ECHDC2-215ENST00000487866 PDS5BQ9NTI5 1447 aa27.49■■□□□ 1.99
ECHDC2-215ENST00000487866 PRDM2Q13029 1718 aa27.41■■□□□ 1.98
ECHDC2-215ENST00000487866 THOC2Q8NI27 1593 aaKnown RBP27.39■■□□□ 1.98
ECHDC2-215ENST00000487866 SUPT5HO00267 1087 aaKnown RBP27.39■■□□□ 1.98
ECHDC2-215ENST00000487866 FANCD2Q9BXW9 1451 aa27.31■■□□□ 1.96
ECHDC2-215ENST00000487866 CEP164Q9UPV0 1460 aa27.26■■□□□ 1.95
ECHDC2-215ENST00000487866 MRC2Q9UBG0 1479 aa27.23■■□□□ 1.95
ECHDC2-215ENST00000487866 WDR62O43379 1518 aa27.17■■□□□ 1.94
ECHDC2-215ENST00000487866 URB2Q14146 1524 aaKnown RBP27.06■■□□□ 1.92
ECHDC2-215ENST00000487866 TRIM41Q8WV44 630 aa26.94■■□□□ 1.9
ECHDC2-215ENST00000487866 TOPBP1Q92547 1522 aa26.9■■□□□ 1.9
ECHDC2-215ENST00000487866 ABCC8Q09428 1581 aa26.89■■□□□ 1.9
ECHDC2-215ENST00000487866 DNMBPQ6XZF7 1577 aa26.88■■□□□ 1.89
ECHDC2-215ENST00000487866 CUX1P39880 1505 aa26.73■■□□□ 1.87
ECHDC2-215ENST00000487866 IFT140Q96RY7 1462 aa26.7■■□□□ 1.87
ECHDC2-215ENST00000487866 POLA1P09884 1462 aaPredicted RBP26.68■■□□□ 1.86
ECHDC2-215ENST00000487866 TARBP1Q13395 1621 aaKnown RBP26.66■■□□□ 1.86
ECHDC2-215ENST00000487866 FGD5Q6ZNL6 1462 aa26.61■■□□□ 1.85
ECHDC2-215ENST00000487866 ZNF608Q9ULD9 1512 aaPredicted RBP26.59■■□□□ 1.85
ECHDC2-215ENST00000487866 OSCARQ8IYS5 282 aa26.58■■□□□ 1.85
ECHDC2-215ENST00000487866 BIVM-ERCC5R4GMW8 1640 aa26.55■■□□□ 1.84
ECHDC2-215ENST00000487866 RAD54L2Q9Y4B4 1467 aa26.54■■□□□ 1.84
ECHDC2-215ENST00000487866 SOGA1O94964 1423 aa26.53■■□□□ 1.84
ECHDC2-215ENST00000487866 WRNQ14191 1432 aaPredicted RBP eCLIP26.53■■□□□ 1.84
ECHDC2-215ENST00000487866 TOP2BQ02880 1626 aa26.53■■□□□ 1.84
ECHDC2-215ENST00000487866 SYNJ1O43426 1573 aa26.51■■□□□ 1.83
ECHDC2-215ENST00000487866 EIF4G3O43432 1585 aaKnown RBP26.51■■□□□ 1.83
ECHDC2-215ENST00000487866 WDR97A6NE52 1622 aa26.48■■□□□ 1.83
ECHDC2-215ENST00000487866 AQRO60306 1485 aaKnown RBP eCLIP26.42■■□□□ 1.825e-6■■■□□ 18.5
ECHDC2-215ENST00000487866 ABCA10Q8WWZ4 1543 aa26.37■■□□□ 1.81
ECHDC2-215ENST00000487866 TDRD9Q8NDG6 1382 aaKnown RBP26.36■■□□□ 1.81
ECHDC2-215ENST00000487866 ABCA5Q8WWZ7 1642 aa26.29■■□□□ 1.8
ECHDC2-215ENST00000487866 PBRM1Q86U86 1689 aa26.26■■□□□ 1.79
ECHDC2-215ENST00000487866 GAPVD1Q14C86 1478 aa26.24■■□□□ 1.79
ECHDC2-215ENST00000487866 GRIN2BQ13224 1484 aa26.23■■□□□ 1.79
ECHDC2-215ENST00000487866 RIMBP3CA6NJZ7 1639 aa26.21■■□□□ 1.79
ECHDC2-215ENST00000487866 RIMBP3BA6NNM3 1639 aa26.21■■□□□ 1.79
ECHDC2-215ENST00000487866 RIMBP3Q9UFD9 1639 aa26.21■■□□□ 1.79
ECHDC2-215ENST00000487866 CHD1O14646 1710 aa26.21■■□□□ 1.79
ECHDC2-215ENST00000487866 SNAPC4Q5SXM2 1469 aa26.18■■□□□ 1.78
ECHDC2-215ENST00000487866 MAGI1Q96QZ7 1491 aaPredicted RBP26.17■■□□□ 1.78
ECHDC2-215ENST00000487866 ARHGEF11O15085 1522 aa26.12■■□□□ 1.77
ECHDC2-215ENST00000487866 SYNJ2O15056 1496 aa26.06■■□□□ 1.76
ECHDC2-215ENST00000487866 ERICH3Q5RHP9 1530 aa26.06■■□□□ 1.76
ECHDC2-215ENST00000487866 FBLN2P98095 1184 aa26.02■■□□□ 1.76
ECHDC2-215ENST00000487866 ADAMTS12P58397 1594 aa26.01■■□□□ 1.75
ECHDC2-215ENST00000487866 CHMP7Q8WUX9 453 aaPredicted RBP25.98■■□□□ 1.75
ECHDC2-215ENST00000487866 CYB5RLQ6IPT4 315 aa25.96■■□□□ 1.75
ECHDC2-215ENST00000487866 KIF27Q86VH2 1401 aa25.96■■□□□ 1.75
ECHDC2-215ENST00000487866 FHAD1B1AJZ9 1412 aa25.93■■□□□ 1.74
ECHDC2-215ENST00000487866 GRIN2AQ12879 1464 aa25.91■■□□□ 1.74
ECHDC2-215ENST00000487866 CLASP1Q7Z460 1538 aa25.89■■□□□ 1.74
ECHDC2-215ENST00000487866 IGF1RP08069 1367 aa25.87■■□□□ 1.73
ECHDC2-215ENST00000487866 CUL7Q14999 1698 aa25.84■■□□□ 1.73
ECHDC2-215ENST00000487866 TRHP20396 242 aaPredicted RBP25.83■■□□□ 1.73
ECHDC2-215ENST00000487866 ARAP1Q96P48 1450 aa25.82■■□□□ 1.72
ECHDC2-215ENST00000487866 NUP160Q12769 1436 aa25.8■■□□□ 1.72
ECHDC2-215ENST00000487866 CEP170Q5SW79 1584 aa25.8■■□□□ 1.72
ECHDC2-215ENST00000487866 RUSC2Q8N2Y8 1516 aa25.78■■□□□ 1.72
ECHDC2-215ENST00000487866 CARMIL1Q5VZK9 1371 aa25.7■■□□□ 1.71
ECHDC2-215ENST00000487866 SHROOM2Q13796 1616 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms