RNA–Protein interactions for RNA: ENST00000477109.1

KDM5C-211, Transcript of lysine demethylase 5C, humanhuman

TSL 3

Gene KDM5C, Length 297 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-211ENST00000477109 NISCHQ9Y2I1 1504 aa27.87■■■□□ 2.05
KDM5C-211ENST00000477109 ABCC9O60706 1549 aa25.28■■□□□ 1.64
KDM5C-211ENST00000477109 CCDC180Q9P1Z9 1646 aa25.03■■□□□ 1.6
KDM5C-211ENST00000477109 RB1CC1Q8TDY2 1594 aa23.94■■□□□ 1.42
KDM5C-211ENST00000477109 DNAJC5BQ9UF47 199 aa23.88■■□□□ 1.41
KDM5C-211ENST00000477109 NACADO15069 1562 aa23.73■■□□□ 1.39
KDM5C-211ENST00000477109 DCAF8L2P0C7V8 631 aa23.69■■□□□ 1.38
KDM5C-211ENST00000477109 PABPN1Q86U42 306 aaKnown RBP eCLIP23.54■■□□□ 1.36
KDM5C-211ENST00000477109 UNC13AQ9UPW8 1703 aa23.39■■□□□ 1.33
KDM5C-211ENST00000477109 MYO15BQ96JP2 1530 aa23.32■■□□□ 1.32
KDM5C-211ENST00000477109 BICRAQ9NZM4 1560 aa23.26■■□□□ 1.31
KDM5C-211ENST00000477109 ZCCHC6Q5VYS8 1495 aaKnown RBP23.05■■□□□ 1.28
KDM5C-211ENST00000477109 DCAF1Q9Y4B6 1507 aa22.97■■□□□ 1.27
KDM5C-211ENST00000477109 SHROOM4Q9ULL8 1493 aa22.87■■□□□ 1.25
KDM5C-211ENST00000477109 SCRIBQ14160 1630 aa22.86■■□□□ 1.25
KDM5C-211ENST00000477109 CC2D2AQ9P2K1 1620 aa22.79■■□□□ 1.24
KDM5C-211ENST00000477109 CECR2Q9BXF3 1484 aa22.77■■□□□ 1.24
KDM5C-211ENST00000477109 EIF4G1Q04637 1599 aaKnown RBP22.7■■□□□ 1.22
KDM5C-211ENST00000477109 DNAJC5Q9H3Z4 198 aa22.03■■□□□ 1.12
KDM5C-211ENST00000477109 NCAPD3P42695 1498 aa21.92■■□□□ 1.1
KDM5C-211ENST00000477109 ATAD2BQ9ULI0 1458 aa21.84■■□□□ 1.09
KDM5C-211ENST00000477109 ERCC6Q03468 1493 aa21.83■■□□□ 1.08
KDM5C-211ENST00000477109 CUX2O14529 1486 aa21.81■■□□□ 1.08
KDM5C-211ENST00000477109 SMARCA4P51532 1647 aa21.77■■□□□ 1.07
KDM5C-211ENST00000477109 SMARCA2P51531 1590 aa21.75■■□□□ 1.07
KDM5C-211ENST00000477109 HMGXB3Q12766 1538 aa21.72■■□□□ 1.07
KDM5C-211ENST00000477109 NESP48681 1621 aa21.67■■□□□ 1.06
KDM5C-211ENST00000477109 BAZ1AQ9NRL2 1556 aaPredicted RBP21.63■■□□□ 1.05
KDM5C-211ENST00000477109 BAZ1BQ9UIG0 1483 aaKnown RBP21.63■■□□□ 1.05
KDM5C-211ENST00000477109 PEG3Q9GZU2 1588 aa21.53■■□□□ 1.04
KDM5C-211ENST00000477109 MROH2BQ7Z745 1585 aa21.49■■□□□ 1.03
KDM5C-211ENST00000477109 THOC2Q8NI27 1593 aaKnown RBP21.44■■□□□ 1.02
KDM5C-211ENST00000477109 LAMC3Q9Y6N6 1575 aa21.44■■□□□ 1.02
KDM5C-211ENST00000477109 KIF21AQ7Z4S6 1674 aa21.34■■□□□ 1.01
KDM5C-211ENST00000477109 PDS5BQ9NTI5 1447 aa21.34■■□□□ 1.01
KDM5C-211ENST00000477109 CADPSQ9ULU8 1353 aa21.26■□□□□ 0.99
KDM5C-211ENST00000477109 WIZO95785 1651 aa21.22■□□□□ 0.99
KDM5C-211ENST00000477109 MRC2Q9UBG0 1479 aa21.17■□□□□ 0.98
KDM5C-211ENST00000477109 WDR62O43379 1518 aa21.1■□□□□ 0.97
KDM5C-211ENST00000477109 CEP164Q9UPV0 1460 aa21.05■□□□□ 0.96
KDM5C-211ENST00000477109 TRIM41Q8WV44 630 aa21.04■□□□□ 0.96
KDM5C-211ENST00000477109 FANCD2Q9BXW9 1451 aa21.02■□□□□ 0.96
KDM5C-211ENST00000477109 RSF1Q96T23 1441 aaPredicted RBP20.98■□□□□ 0.95
KDM5C-211ENST00000477109 CFTRP13569 1480 aa20.97■□□□□ 0.95
KDM5C-211ENST00000477109 TOP2AP11388 1531 aaKnown RBP20.92■□□□□ 0.94
KDM5C-211ENST00000477109 URB2Q14146 1524 aaKnown RBP20.86■□□□□ 0.93
KDM5C-211ENST00000477109 OSCARQ8IYS5 282 aa20.84■□□□□ 0.93
KDM5C-211ENST00000477109 CCDC88BA6NC98 1476 aa20.71■□□□□ 0.91
KDM5C-211ENST00000477109 PRDM2Q13029 1718 aa20.7■□□□□ 0.9
KDM5C-211ENST00000477109 ZNF608Q9ULD9 1512 aaPredicted RBP20.65■□□□□ 0.9
KDM5C-211ENST00000477109 IFT140Q96RY7 1462 aa20.64■□□□□ 0.89
KDM5C-211ENST00000477109 TOPBP1Q92547 1522 aa20.6■□□□□ 0.89
KDM5C-211ENST00000477109 RIMBP3CA6NJZ7 1639 aa20.55■□□□□ 0.88
KDM5C-211ENST00000477109 RIMBP3BA6NNM3 1639 aa20.55■□□□□ 0.88
KDM5C-211ENST00000477109 RIMBP3Q9UFD9 1639 aa20.55■□□□□ 0.88
KDM5C-211ENST00000477109 ABCC8Q09428 1581 aa20.53■□□□□ 0.88
KDM5C-211ENST00000477109 DNMBPQ6XZF7 1577 aa20.5■□□□□ 0.87
KDM5C-211ENST00000477109 EIF4G3O43432 1585 aaKnown RBP20.49■□□□□ 0.87
KDM5C-211ENST00000477109 ARHGEF11O15085 1522 aa20.47■□□□□ 0.87
KDM5C-211ENST00000477109 AQRO60306 1485 aaKnown RBP eCLIP20.44■□□□□ 0.86
KDM5C-211ENST00000477109 TARBP1Q13395 1621 aaKnown RBP20.42■□□□□ 0.86
KDM5C-211ENST00000477109 POLA1P09884 1462 aaPredicted RBP20.38■□□□□ 0.85
KDM5C-211ENST00000477109 FBLN2P98095 1184 aa20.38■□□□□ 0.85
KDM5C-211ENST00000477109 CYB5RLQ6IPT4 315 aa20.38■□□□□ 0.85
KDM5C-211ENST00000477109 CHD1O14646 1710 aa20.38■□□□□ 0.85
KDM5C-211ENST00000477109 RAD54L2Q9Y4B4 1467 aa20.34■□□□□ 0.85
KDM5C-211ENST00000477109 SOGA1O94964 1423 aa20.31■□□□□ 0.84
KDM5C-211ENST00000477109 TDRD9Q8NDG6 1382 aaKnown RBP20.31■□□□□ 0.84
KDM5C-211ENST00000477109 ARAP1Q96P48 1450 aa20.26■□□□□ 0.83
KDM5C-211ENST00000477109 FGD5Q6ZNL6 1462 aa20.24■□□□□ 0.83
KDM5C-211ENST00000477109 TRHP20396 242 aaPredicted RBP20.22■□□□□ 0.83
KDM5C-211ENST00000477109 SNAPC4Q5SXM2 1469 aa20.22■□□□□ 0.83
KDM5C-211ENST00000477109 CUX1P39880 1505 aa20.19■□□□□ 0.82
KDM5C-211ENST00000477109 SUPT5HO00267 1087 aaKnown RBP20.18■□□□□ 0.82
KDM5C-211ENST00000477109 CHMP7Q8WUX9 453 aaPredicted RBP20.18■□□□□ 0.82
KDM5C-211ENST00000477109 WDR97A6NE52 1622 aa20.16■□□□□ 0.82
KDM5C-211ENST00000477109 CLASP1Q7Z460 1538 aa20.13■□□□□ 0.81
KDM5C-211ENST00000477109 GRIN2BQ13224 1484 aa20.13■□□□□ 0.81
KDM5C-211ENST00000477109 MAGI1Q96QZ7 1491 aaPredicted RBP20.13■□□□□ 0.81
KDM5C-211ENST00000477109 SYNJ1O43426 1573 aa20.11■□□□□ 0.81
KDM5C-211ENST00000477109 SYNJ2O15056 1496 aa20.08■□□□□ 0.81
KDM5C-211ENST00000477109 GAPVD1Q14C86 1478 aa20.05■□□□□ 0.8
KDM5C-211ENST00000477109 PBRM1Q86U86 1689 aa20.02■□□□□ 0.8
KDM5C-211ENST00000477109 ABCA10Q8WWZ4 1543 aa19.98■□□□□ 0.79
KDM5C-211ENST00000477109 ABCA5Q8WWZ7 1642 aa19.96■□□□□ 0.79
KDM5C-211ENST00000477109 WRNQ14191 1432 aaPredicted RBP eCLIP19.88■□□□□ 0.77
KDM5C-211ENST00000477109 GRIN2AQ12879 1464 aa19.87■□□□□ 0.77
KDM5C-211ENST00000477109 ERCC6L2Q5T890 1561 aa19.84■□□□□ 0.77
KDM5C-211ENST00000477109 ADAMTS12P58397 1594 aa19.83■□□□□ 0.76
KDM5C-211ENST00000477109 CEP170Q5SW79 1584 aa19.81■□□□□ 0.76
KDM5C-211ENST00000477109 TOP2BQ02880 1626 aa19.8■□□□□ 0.76
KDM5C-211ENST00000477109 NUP160Q12769 1436 aa19.8■□□□□ 0.76
KDM5C-211ENST00000477109 BIVM-ERCC5R4GMW8 1640 aa19.8■□□□□ 0.76
KDM5C-211ENST00000477109 FHAD1B1AJZ9 1412 aa19.78■□□□□ 0.76
KDM5C-211ENST00000477109 AEBP2Q6ZN18 517 aaPredicted RBP19.74■□□□□ 0.75
KDM5C-211ENST00000477109 SHROOM2Q13796 1616 aa19.72■□□□□ 0.75
KDM5C-211ENST00000477109 ERICH3Q5RHP9 1530 aa19.71■□□□□ 0.75
KDM5C-211ENST00000477109 PRG4Q92954 1404 aaPredicted RBP19.66■□□□□ 0.74
KDM5C-211ENST00000477109 JPH4Q96JJ6 628 aa19.64■□□□□ 0.73
KDM5C-211ENST00000477109 KIF13AQ9H1H9 1805 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms