RNA–Protein interactions for RNA: ENST00000487851.5

ECHDC2-214, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 3

Gene ECHDC2, Length 471 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-214ENST00000487851 NISCHQ9Y2I1 1504 aa35.14■■■■□ 3.22
ECHDC2-214ENST00000487851 ABCC9O60706 1549 aa32.13■■■□□ 2.73
ECHDC2-214ENST00000487851 CCDC180Q9P1Z9 1646 aa31.71■■■□□ 2.67
ECHDC2-214ENST00000487851 DNAJC5BQ9UF47 199 aa30.5■■■□□ 2.47
ECHDC2-214ENST00000487851 RB1CC1Q8TDY2 1594 aa30.41■■■□□ 2.46
ECHDC2-214ENST00000487851 NACADO15069 1562 aa30.11■■■□□ 2.41
ECHDC2-214ENST00000487851 DCAF8L2P0C7V8 631 aa29.85■■■□□ 2.37
ECHDC2-214ENST00000487851 PABPN1Q86U42 306 aaKnown RBP eCLIP29.85■■■□□ 2.375e-7■□□□□ 10.9
ECHDC2-214ENST00000487851 UNC13AQ9UPW8 1703 aa29.62■■■□□ 2.33
ECHDC2-214ENST00000487851 MYO15BQ96JP2 1530 aa29.57■■■□□ 2.32
ECHDC2-214ENST00000487851 BICRAQ9NZM4 1560 aa29.51■■■□□ 2.31
ECHDC2-214ENST00000487851 SHROOM4Q9ULL8 1493 aa29.16■■■□□ 2.26
ECHDC2-214ENST00000487851 DCAF1Q9Y4B6 1507 aa29.03■■■□□ 2.24
ECHDC2-214ENST00000487851 ZCCHC6Q5VYS8 1495 aaKnown RBP29.03■■■□□ 2.24
ECHDC2-214ENST00000487851 CECR2Q9BXF3 1484 aa29.01■■■□□ 2.23
ECHDC2-214ENST00000487851 CC2D2AQ9P2K1 1620 aa28.99■■■□□ 2.23
ECHDC2-214ENST00000487851 EIF4G1Q04637 1599 aaKnown RBP28.84■■■□□ 2.21
ECHDC2-214ENST00000487851 SCRIBQ14160 1630 aa28.84■■■□□ 2.21
ECHDC2-214ENST00000487851 DNAJC5Q9H3Z4 198 aa28.38■■■□□ 2.13
ECHDC2-214ENST00000487851 CUX2O14529 1486 aa27.91■■■□□ 2.06
ECHDC2-214ENST00000487851 NCAPD3P42695 1498 aa27.81■■■□□ 2.04
ECHDC2-214ENST00000487851 ERCC6Q03468 1493 aa27.81■■■□□ 2.04
ECHDC2-214ENST00000487851 ATAD2BQ9ULI0 1458 aa27.64■■■□□ 2.02
ECHDC2-214ENST00000487851 SMARCA2P51531 1590 aa27.56■■■□□ 2
ECHDC2-214ENST00000487851 HMGXB3Q12766 1538 aa27.55■■■□□ 2
ECHDC2-214ENST00000487851 SMARCA4P51532 1647 aa27.49■■□□□ 1.99
ECHDC2-214ENST00000487851 NESP48681 1621 aa27.46■■□□□ 1.99
ECHDC2-214ENST00000487851 BAZ1BQ9UIG0 1483 aaKnown RBP27.36■■□□□ 1.97
ECHDC2-214ENST00000487851 BAZ1AQ9NRL2 1556 aaPredicted RBP27.32■■□□□ 1.96
ECHDC2-214ENST00000487851 THOC2Q8NI27 1593 aaKnown RBP27.27■■□□□ 1.96
ECHDC2-214ENST00000487851 PEG3Q9GZU2 1588 aa27.24■■□□□ 1.95
ECHDC2-214ENST00000487851 LAMC3Q9Y6N6 1575 aa27.24■■□□□ 1.95
ECHDC2-214ENST00000487851 PDS5BQ9NTI5 1447 aa27.13■■□□□ 1.93
ECHDC2-214ENST00000487851 KIF21AQ7Z4S6 1674 aa27.06■■□□□ 1.92
ECHDC2-214ENST00000487851 MROH2BQ7Z745 1585 aa27.05■■□□□ 1.92
ECHDC2-214ENST00000487851 CADPSQ9ULU8 1353 aa26.95■■□□□ 1.9
ECHDC2-214ENST00000487851 TRIM41Q8WV44 630 aa26.94■■□□□ 1.9
ECHDC2-214ENST00000487851 MRC2Q9UBG0 1479 aa26.9■■□□□ 1.9
ECHDC2-214ENST00000487851 WDR62O43379 1518 aa26.84■■□□□ 1.89
ECHDC2-214ENST00000487851 CEP164Q9UPV0 1460 aa26.7■■□□□ 1.87
ECHDC2-214ENST00000487851 WIZO95785 1651 aa26.68■■□□□ 1.86
ECHDC2-214ENST00000487851 FANCD2Q9BXW9 1451 aa26.62■■□□□ 1.85
ECHDC2-214ENST00000487851 OSCARQ8IYS5 282 aa26.58■■□□□ 1.85
ECHDC2-214ENST00000487851 CFTRP13569 1480 aa26.55■■□□□ 1.84
ECHDC2-214ENST00000487851 URB2Q14146 1524 aaKnown RBP26.41■■□□□ 1.82
ECHDC2-214ENST00000487851 TOP2AP11388 1531 aaKnown RBP26.36■■□□□ 1.81
ECHDC2-214ENST00000487851 RSF1Q96T23 1441 aaPredicted RBP26.35■■□□□ 1.81
ECHDC2-214ENST00000487851 RIMBP3CA6NJZ7 1639 aa26.21■■□□□ 1.79
ECHDC2-214ENST00000487851 RIMBP3BA6NNM3 1639 aa26.21■■□□□ 1.79
ECHDC2-214ENST00000487851 RIMBP3Q9UFD9 1639 aa26.21■■□□□ 1.79
ECHDC2-214ENST00000487851 IFT140Q96RY7 1462 aa26.2■■□□□ 1.78
ECHDC2-214ENST00000487851 PRDM2Q13029 1718 aa26.17■■□□□ 1.78
ECHDC2-214ENST00000487851 ZNF608Q9ULD9 1512 aaPredicted RBP26.15■■□□□ 1.78
ECHDC2-214ENST00000487851 ARHGEF11O15085 1522 aa26.12■■□□□ 1.77
ECHDC2-214ENST00000487851 TOPBP1Q92547 1522 aa26.06■■□□□ 1.76
ECHDC2-214ENST00000487851 CCDC88BA6NC98 1476 aa26.05■■□□□ 1.76
ECHDC2-214ENST00000487851 ABCC8Q09428 1581 aa26.03■■□□□ 1.76
ECHDC2-214ENST00000487851 EIF4G3O43432 1585 aaKnown RBP25.99■■□□□ 1.75
ECHDC2-214ENST00000487851 CYB5RLQ6IPT4 315 aa25.96■■□□□ 1.75
ECHDC2-214ENST00000487851 DNMBPQ6XZF7 1577 aa25.93■■□□□ 1.74
ECHDC2-214ENST00000487851 AQRO60306 1485 aaKnown RBP eCLIP25.87■■□□□ 1.733e-6■■□□□ 13.8
ECHDC2-214ENST00000487851 TARBP1Q13395 1621 aaKnown RBP25.85■■□□□ 1.73
ECHDC2-214ENST00000487851 CHD1O14646 1710 aa25.84■■□□□ 1.73
ECHDC2-214ENST00000487851 TRHP20396 242 aaPredicted RBP25.83■■□□□ 1.73
ECHDC2-214ENST00000487851 FBLN2P98095 1184 aa25.82■■□□□ 1.72
ECHDC2-214ENST00000487851 ARAP1Q96P48 1450 aa25.82■■□□□ 1.72
ECHDC2-214ENST00000487851 POLA1P09884 1462 aaPredicted RBP25.78■■□□□ 1.72
ECHDC2-214ENST00000487851 RAD54L2Q9Y4B4 1467 aa25.66■■□□□ 1.7
ECHDC2-214ENST00000487851 SOGA1O94964 1423 aa25.66■■□□□ 1.7
ECHDC2-214ENST00000487851 TDRD9Q8NDG6 1382 aaKnown RBP25.66■■□□□ 1.7
ECHDC2-214ENST00000487851 WDR97A6NE52 1622 aa25.61■■□□□ 1.69
ECHDC2-214ENST00000487851 SNAPC4Q5SXM2 1469 aa25.6■■□□□ 1.69
ECHDC2-214ENST00000487851 CHMP7Q8WUX9 453 aaPredicted RBP25.58■■□□□ 1.69
ECHDC2-214ENST00000487851 CLASP1Q7Z460 1538 aa25.58■■□□□ 1.68
ECHDC2-214ENST00000487851 SYNJ1O43426 1573 aa25.55■■□□□ 1.68
ECHDC2-214ENST00000487851 FGD5Q6ZNL6 1462 aa25.54■■□□□ 1.68
ECHDC2-214ENST00000487851 MAGI1Q96QZ7 1491 aaPredicted RBP25.54■■□□□ 1.68
ECHDC2-214ENST00000487851 GRIN2BQ13224 1484 aa25.5■■□□□ 1.67
ECHDC2-214ENST00000487851 SYNJ2O15056 1496 aa25.47■■□□□ 1.67
ECHDC2-214ENST00000487851 CUX1P39880 1505 aa25.44■■□□□ 1.66
ECHDC2-214ENST00000487851 AEBP2Q6ZN18 517 aaPredicted RBP25.41■■□□□ 1.66
ECHDC2-214ENST00000487851 GAPVD1Q14C86 1478 aa25.35■■□□□ 1.65
ECHDC2-214ENST00000487851 PBRM1Q86U86 1689 aa25.3■■□□□ 1.64
ECHDC2-214ENST00000487851 ABCA10Q8WWZ4 1543 aa25.24■■□□□ 1.63
ECHDC2-214ENST00000487851 ABCA5Q8WWZ7 1642 aa25.22■■□□□ 1.63
ECHDC2-214ENST00000487851 GRIN2AQ12879 1464 aa25.15■■□□□ 1.62
ECHDC2-214ENST00000487851 ERCC6L2Q5T890 1561 aa25.11■■□□□ 1.61
ECHDC2-214ENST00000487851 NUP160Q12769 1436 aa25.09■■□□□ 1.61
ECHDC2-214ENST00000487851 CEP170Q5SW79 1584 aa25.08■■□□□ 1.61
ECHDC2-214ENST00000487851 ADAMTS12P58397 1594 aa25.07■■□□□ 1.6
ECHDC2-214ENST00000487851 WRNQ14191 1432 aaPredicted RBP eCLIP25.07■■□□□ 1.6
ECHDC2-214ENST00000487851 FHAD1B1AJZ9 1412 aa25.02■■□□□ 1.6
ECHDC2-214ENST00000487851 SHROOM2Q13796 1616 aa25.01■■□□□ 1.59
ECHDC2-214ENST00000487851 TOP2BQ02880 1626 aa24.93■■□□□ 1.58
ECHDC2-214ENST00000487851 ERICH3Q5RHP9 1530 aa24.92■■□□□ 1.58
ECHDC2-214ENST00000487851 BIVM-ERCC5R4GMW8 1640 aa24.92■■□□□ 1.58
ECHDC2-214ENST00000487851 PRG4Q92954 1404 aaPredicted RBP24.88■■□□□ 1.57
ECHDC2-214ENST00000487851 KIF13AQ9H1H9 1805 aa24.86■■□□□ 1.57
ECHDC2-214ENST00000487851 SUPT5HO00267 1087 aaKnown RBP24.86■■□□□ 1.57
ECHDC2-214ENST00000487851 JPH4Q96JJ6 628 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 149.2 ms