RNA–Protein interactions for RNA: ENST00000504525.1

GCLC-203, Transcript of glutamate-cysteine ligase catalytic subunit, humanhuman

TSL 3

Gene GCLC, Length 1,011 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCLC-203ENST00000504525 NISCHQ9Y2I1 1504 aa56.39■■■■■ 6.62
GCLC-203ENST00000504525 CCDC180Q9P1Z9 1646 aa50.47■■■■■ 5.67
GCLC-203ENST00000504525 ABCC9O60706 1549 aa50.31■■■■■ 5.64
GCLC-203ENST00000504525 RB1CC1Q8TDY2 1594 aa48■■■■■ 5.27
GCLC-203ENST00000504525 NACADO15069 1562 aa47.74■■■■■ 5.23
GCLC-203ENST00000504525 DCAF8L2P0C7V8 631 aa47.62■■■■■ 5.21
GCLC-203ENST00000504525 MYO15BQ96JP2 1530 aa47.17■■■■■ 5.14
GCLC-203ENST00000504525 DNAJC5BQ9UF47 199 aa46.99■■■■■ 5.11
GCLC-203ENST00000504525 PABPN1Q86U42 306 aaKnown RBP eCLIP46.91■■■■■ 5.1
GCLC-203ENST00000504525 ZCCHC6Q5VYS8 1495 aaKnown RBP46.76■■■■■ 5.08
GCLC-203ENST00000504525 UNC13AQ9UPW8 1703 aa46.74■■■■■ 5.07
GCLC-203ENST00000504525 DCAF1Q9Y4B6 1507 aa46.63■■■■■ 5.05
GCLC-203ENST00000504525 BICRAQ9NZM4 1560 aa46.51■■■■■ 5.04
GCLC-203ENST00000504525 SHROOM4Q9ULL8 1493 aa46.03■■■■■ 4.96
GCLC-203ENST00000504525 SCRIBQ14160 1630 aa45.99■■■■■ 4.95
GCLC-203ENST00000504525 CC2D2AQ9P2K1 1620 aa45.41■■■■■ 4.86
GCLC-203ENST00000504525 EIF4G1Q04637 1599 aaKnown RBP45.39■■■■■ 4.86
GCLC-203ENST00000504525 CECR2Q9BXF3 1484 aa45.32■■■■■ 4.85
GCLC-203ENST00000504525 NCAPD3P42695 1498 aa44.08■■■■■ 4.65
GCLC-203ENST00000504525 ATAD2BQ9ULI0 1458 aa43.95■■■■■ 4.63
GCLC-203ENST00000504525 SMARCA4P51532 1647 aa43.91■■■■■ 4.62
GCLC-203ENST00000504525 SMARCA2P51531 1590 aa43.86■■■■■ 4.61
GCLC-203ENST00000504525 BAZ1AQ9NRL2 1556 aaPredicted RBP43.78■■■■■ 4.6
GCLC-203ENST00000504525 HMGXB3Q12766 1538 aa43.73■■■■■ 4.59
GCLC-203ENST00000504525 BAZ1BQ9UIG0 1483 aaKnown RBP43.55■■■■■ 4.56
GCLC-203ENST00000504525 PEG3Q9GZU2 1588 aa43.5■■■■■ 4.55
GCLC-203ENST00000504525 ERCC6Q03468 1493 aa43.48■■■■■ 4.55
GCLC-203ENST00000504525 MROH2BQ7Z745 1585 aa43.42■■■■■ 4.54
GCLC-203ENST00000504525 CUX2O14529 1486 aa43.32■■■■■ 4.52
GCLC-203ENST00000504525 NESP48681 1621 aa43.23■■■■■ 4.51
GCLC-203ENST00000504525 DNAJC5Q9H3Z4 198 aa43.1■■■■■ 4.49
GCLC-203ENST00000504525 LAMC3Q9Y6N6 1575 aa43.03■■■■■ 4.48
GCLC-203ENST00000504525 WIZO95785 1651 aa42.87■■■■■ 4.45
GCLC-203ENST00000504525 PDS5BQ9NTI5 1447 aa42.85■■■■■ 4.45
GCLC-203ENST00000504525 CADPSQ9ULU8 1353 aa42.78■■■■■ 4.44
GCLC-203ENST00000504525 THOC2Q8NI27 1593 aaKnown RBP42.72■■■■■ 4.43
GCLC-203ENST00000504525 RSF1Q96T23 1441 aaPredicted RBP42.64■■■■■ 4.42
GCLC-203ENST00000504525 KIF21AQ7Z4S6 1674 aa42.63■■■■■ 4.42
GCLC-203ENST00000504525 TOP2AP11388 1531 aaKnown RBP42.41■■■■■ 4.38
GCLC-203ENST00000504525 MRC2Q9UBG0 1479 aa42.4■■■■■ 4.38
GCLC-203ENST00000504525 CFTRP13569 1480 aa42.3■■■■■ 4.36
GCLC-203ENST00000504525 CEP164Q9UPV0 1460 aa42.28■■■■■ 4.36
GCLC-203ENST00000504525 FANCD2Q9BXW9 1451 aa42.25■■■■■ 4.35
GCLC-203ENST00000504525 WDR62O43379 1518 aa42.25■■■■■ 4.35
GCLC-203ENST00000504525 CCDC88BA6NC98 1476 aa41.95■■■■■ 4.31
GCLC-203ENST00000504525 URB2Q14146 1524 aaKnown RBP41.85■■■■■ 4.29
GCLC-203ENST00000504525 PRDM2Q13029 1718 aa41.75■■■■■ 4.27
GCLC-203ENST00000504525 ABCC8Q09428 1581 aa41.47■■■■■ 4.23
GCLC-203ENST00000504525 OSCARQ8IYS5 282 aa41.46■■■■■ 4.23
GCLC-203ENST00000504525 IFT140Q96RY7 1462 aa41.45■■■■■ 4.23
GCLC-203ENST00000504525 TOPBP1Q92547 1522 aa41.44■■■■■ 4.23
GCLC-203ENST00000504525 DNMBPQ6XZF7 1577 aa41.31■■■■■ 4.2
GCLC-203ENST00000504525 ZNF608Q9ULD9 1512 aaPredicted RBP41.28■■■■■ 4.2
GCLC-203ENST00000504525 TRIM41Q8WV44 630 aa41.28■■■■■ 4.2
GCLC-203ENST00000504525 EIF4G3O43432 1585 aaKnown RBP41.04■■■■■ 4.16
GCLC-203ENST00000504525 POLA1P09884 1462 aaPredicted RBP41.04■■■■■ 4.16
GCLC-203ENST00000504525 TARBP1Q13395 1621 aaKnown RBP41.02■■■■■ 4.16
GCLC-203ENST00000504525 AQRO60306 1485 aaKnown RBP eCLIP40.98■■■■■ 4.15
GCLC-203ENST00000504525 SUPT5HO00267 1087 aaKnown RBP40.98■■■■■ 4.15
GCLC-203ENST00000504525 SOGA1O94964 1423 aa40.93■■■■■ 4.14
GCLC-203ENST00000504525 RAD54L2Q9Y4B4 1467 aa40.88■■■■■ 4.13
GCLC-203ENST00000504525 FGD5Q6ZNL6 1462 aa40.81■■■■■ 4.12
GCLC-203ENST00000504525 TDRD9Q8NDG6 1382 aaKnown RBP40.8■■■■■ 4.12
GCLC-203ENST00000504525 CUX1P39880 1505 aa40.77■■■■■ 4.12
GCLC-203ENST00000504525 FBLN2P98095 1184 aa40.76■■■■■ 4.12
GCLC-203ENST00000504525 RIMBP3CA6NJZ7 1639 aa40.73■■■■■ 4.11
GCLC-203ENST00000504525 RIMBP3BA6NNM3 1639 aa40.73■■■■■ 4.11
GCLC-203ENST00000504525 RIMBP3Q9UFD9 1639 aa40.73■■■■■ 4.11
GCLC-203ENST00000504525 WDR97A6NE52 1622 aa40.69■■■■■ 4.1
GCLC-203ENST00000504525 ARHGEF11O15085 1522 aa40.67■■■■■ 4.1
GCLC-203ENST00000504525 CHD1O14646 1710 aa40.65■■■■■ 4.1
GCLC-203ENST00000504525 SNAPC4Q5SXM2 1469 aa40.55■■■■■ 4.08
GCLC-203ENST00000504525 GRIN2BQ13224 1484 aa40.53■■■■■ 4.08
GCLC-203ENST00000504525 CHMP7Q8WUX9 453 aaPredicted RBP40.52■■■■■ 4.08
GCLC-203ENST00000504525 MAGI1Q96QZ7 1491 aaPredicted RBP40.5■■■■■ 4.07
GCLC-203ENST00000504525 CYB5RLQ6IPT4 315 aa40.45■■■■■ 4.07
GCLC-203ENST00000504525 GAPVD1Q14C86 1478 aa40.4■■■■■ 4.06
GCLC-203ENST00000504525 ABCA10Q8WWZ4 1543 aa40.38■■■■■ 4.06
GCLC-203ENST00000504525 SYNJ2O15056 1496 aa40.36■■■■■ 4.05
GCLC-203ENST00000504525 WRNQ14191 1432 aaPredicted RBP eCLIP40.33■■■■■ 4.05
GCLC-203ENST00000504525 SYNJ1O43426 1573 aa40.31■■■■■ 4.04
GCLC-203ENST00000504525 ARAP1Q96P48 1450 aa40.26■■■■■ 4.04
GCLC-203ENST00000504525 CLASP1Q7Z460 1538 aa40.26■■■■■ 4.03
GCLC-203ENST00000504525 PBRM1Q86U86 1689 aa40.25■■■■■ 4.03
GCLC-203ENST00000504525 ABCA5Q8WWZ7 1642 aa40.24■■■■■ 4.03
GCLC-203ENST00000504525 TOP2BQ02880 1626 aa40.2■■■■■ 4.03
GCLC-203ENST00000504525 BIVM-ERCC5R4GMW8 1640 aa40.17■■■■■ 4.02
GCLC-203ENST00000504525 GRIN2AQ12879 1464 aa39.98■■■■□ 3.99
GCLC-203ENST00000504525 TRHP20396 242 aaPredicted RBP39.96■■■■□ 3.99
GCLC-203ENST00000504525 FHAD1B1AJZ9 1412 aa39.92■■■■□ 3.98
GCLC-203ENST00000504525 ADAMTS12P58397 1594 aa39.91■■■■□ 3.98
GCLC-203ENST00000504525 ERICH3Q5RHP9 1530 aa39.89■■■■□ 3.98
GCLC-203ENST00000504525 NUP160Q12769 1436 aa39.83■■■■□ 3.97
GCLC-203ENST00000504525 CEP170Q5SW79 1584 aa39.76■■■■□ 3.96
GCLC-203ENST00000504525 ERCC6L2Q5T890 1561 aa39.6■■■■□ 3.93
GCLC-203ENST00000504525 SHROOM2Q13796 1616 aa39.57■■■■□ 3.92
GCLC-203ENST00000504525 KIF27Q86VH2 1401 aa39.52■■■■□ 3.92
GCLC-203ENST00000504525 JPH4Q96JJ6 628 aa39.52■■■■□ 3.92
GCLC-203ENST00000504525 PRG4Q92954 1404 aaPredicted RBP39.47■■■■□ 3.91
GCLC-203ENST00000504525 IGF1RP08069 1367 aa39.46■■■■□ 3.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms