RNA–Protein interactions for RNA: ENST00000436070.6

SETD3-204, Transcript of SET domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene SETD3, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETD3-204ENST00000436070 NISCHQ9Y2I1 1504 aa28.1■■■□□ 2.09
SETD3-204ENST00000436070 CCDC180Q9P1Z9 1646 aa25.35■■□□□ 1.65
SETD3-204ENST00000436070 ABCC9O60706 1549 aa25.2■■□□□ 1.63
SETD3-204ENST00000436070 RB1CC1Q8TDY2 1594 aa24.11■■□□□ 1.45
SETD3-204ENST00000436070 NACADO15069 1562 aa23.95■■□□□ 1.43
SETD3-204ENST00000436070 DNAJC5BQ9UF47 199 aa23.69■■□□□ 1.38
SETD3-204ENST00000436070 MYO15BQ96JP2 1530 aa23.68■■□□□ 1.38
SETD3-204ENST00000436070 UNC13AQ9UPW8 1703 aa23.54■■□□□ 1.36
SETD3-204ENST00000436070 DCAF8L2P0C7V8 631 aa23.47■■□□□ 1.35
SETD3-204ENST00000436070 BICRAQ9NZM4 1560 aa23.39■■□□□ 1.33
SETD3-204ENST00000436070 PABPN1Q86U42 306 aaKnown RBP eCLIP23.38■■□□□ 1.33
SETD3-204ENST00000436070 DCAF1Q9Y4B6 1507 aa23.33■■□□□ 1.32
SETD3-204ENST00000436070 ZCCHC6Q5VYS8 1495 aaKnown RBP23.29■■□□□ 1.32
SETD3-204ENST00000436070 SHROOM4Q9ULL8 1493 aa23.22■■□□□ 1.31
SETD3-204ENST00000436070 SCRIBQ14160 1630 aa22.91■■□□□ 1.26
SETD3-204ENST00000436070 CC2D2AQ9P2K1 1620 aa22.85■■□□□ 1.25
SETD3-204ENST00000436070 EIF4G1Q04637 1599 aaKnown RBP22.8■■□□□ 1.24
SETD3-204ENST00000436070 CECR2Q9BXF3 1484 aa22.77■■□□□ 1.24
SETD3-204ENST00000436070 PELP1Q8IZL8 1130 aaKnown RBP22.63■■□□□ 1.21
SETD3-204ENST00000436070 MYT1Q01538 1121 aa22.27■■□□□ 1.16
SETD3-204ENST00000436070 NCAPD3P42695 1498 aa22.09■■□□□ 1.13
SETD3-204ENST00000436070 ATAD2BQ9ULI0 1458 aa21.97■■□□□ 1.11
SETD3-204ENST00000436070 SMARCA2P51531 1590 aa21.95■■□□□ 1.1
SETD3-204ENST00000436070 HMGXB3Q12766 1538 aa21.95■■□□□ 1.1
SETD3-204ENST00000436070 SMARCA4P51532 1647 aa21.94■■□□□ 1.1
SETD3-204ENST00000436070 CUX2O14529 1486 aa21.92■■□□□ 1.1
SETD3-204ENST00000436070 DNAJC5Q9H3Z4 198 aa21.9■■□□□ 1.1
SETD3-204ENST00000436070 BAZ1AQ9NRL2 1556 aaPredicted RBP21.83■■□□□ 1.09
SETD3-204ENST00000436070 PEG3Q9GZU2 1588 aa21.81■■□□□ 1.08
SETD3-204ENST00000436070 ERCC6Q03468 1493 aa21.79■■□□□ 1.08
SETD3-204ENST00000436070 BAZ1BQ9UIG0 1483 aaKnown RBP21.73■■□□□ 1.07
SETD3-204ENST00000436070 NESP48681 1621 aa21.63■■□□□ 1.05
SETD3-204ENST00000436070 LAMC3Q9Y6N6 1575 aa21.61■■□□□ 1.05
SETD3-204ENST00000436070 MROH2BQ7Z745 1585 aa21.59■■□□□ 1.05
SETD3-204ENST00000436070 THOC2Q8NI27 1593 aaKnown RBP21.55■■□□□ 1.04
SETD3-204ENST00000436070 PDS5BQ9NTI5 1447 aa21.45■■□□□ 1.02
SETD3-204ENST00000436070 KIF21AQ7Z4S6 1674 aa21.42■■□□□ 1.02
SETD3-204ENST00000436070 CADPSQ9ULU8 1353 aa21.36■■□□□ 1.01
SETD3-204ENST00000436070 TTBK1Q5TCY1 1321 aaPredicted RBP21.34■■□□□ 1.01
SETD3-204ENST00000436070 WIZO95785 1651 aa21.32■■□□□ 1
SETD3-204ENST00000436070 HRCP23327 699 aa21.3■■□□□ 1
SETD3-204ENST00000436070 MRC2Q9UBG0 1479 aa21.27■■□□□ 1
SETD3-204ENST00000436070 WDR62O43379 1518 aa21.25■□□□□ 0.99
SETD3-204ENST00000436070 CEP164Q9UPV0 1460 aa21.15■□□□□ 0.98
SETD3-204ENST00000436070 CFTRP13569 1480 aa21.13■□□□□ 0.97
SETD3-204ENST00000436070 RSF1Q96T23 1441 aaPredicted RBP21.13■□□□□ 0.97
SETD3-204ENST00000436070 TOP2AP11388 1531 aaKnown RBP21.12■□□□□ 0.97
SETD3-204ENST00000436070 FANCD2Q9BXW9 1451 aa21.11■□□□□ 0.97
SETD3-204ENST00000436070 PRDM2Q13029 1718 aa20.98■□□□□ 0.95
SETD3-204ENST00000436070 URB2Q14146 1524 aaKnown RBP20.94■□□□□ 0.94
SETD3-204ENST00000436070 CCDC88BA6NC98 1476 aa20.82■□□□□ 0.92
SETD3-204ENST00000436070 OSCARQ8IYS5 282 aa20.79■□□□□ 0.92
SETD3-204ENST00000436070 IFT140Q96RY7 1462 aa20.76■□□□□ 0.91
SETD3-204ENST00000436070 ABCC8Q09428 1581 aa20.74■□□□□ 0.91
SETD3-204ENST00000436070 TRIM41Q8WV44 630 aa20.74■□□□□ 0.91
SETD3-204ENST00000436070 TOPBP1Q92547 1522 aa20.71■□□□□ 0.91
SETD3-204ENST00000436070 DNMBPQ6XZF7 1577 aa20.66■□□□□ 0.9
SETD3-204ENST00000436070 ZNF608Q9ULD9 1512 aaPredicted RBP20.64■□□□□ 0.89
SETD3-204ENST00000436070 SCAF1Q9H7N4 1312 aaKnown RBP20.61■□□□□ 0.89
SETD3-204ENST00000436070 EIF4G3O43432 1585 aaKnown RBP20.58■□□□□ 0.89
SETD3-204ENST00000436070 TARBP1Q13395 1621 aaKnown RBP20.57■□□□□ 0.88
SETD3-204ENST00000436070 RIMBP3CA6NJZ7 1639 aa20.56■□□□□ 0.88
SETD3-204ENST00000436070 RIMBP3BA6NNM3 1639 aa20.56■□□□□ 0.88
SETD3-204ENST00000436070 RIMBP3Q9UFD9 1639 aa20.56■□□□□ 0.88
SETD3-204ENST00000436070 ARHGEF11O15085 1522 aa20.48■□□□□ 0.87
SETD3-204ENST00000436070 POLA1P09884 1462 aaPredicted RBP20.48■□□□□ 0.87
SETD3-204ENST00000436070 WDR97A6NE52 1622 aa20.47■□□□□ 0.87
SETD3-204ENST00000436070 CHD1O14646 1710 aa20.44■□□□□ 0.86
SETD3-204ENST00000436070 AQRO60306 1485 aaKnown RBP eCLIP20.43■□□□□ 0.86
SETD3-204ENST00000436070 PPARGC1BQ86YN6 1023 aaKnown RBP20.39■□□□□ 0.85
SETD3-204ENST00000436070 SOGA1O94964 1423 aa20.36■□□□□ 0.85
SETD3-204ENST00000436070 RAD54L2Q9Y4B4 1467 aa20.34■□□□□ 0.85
SETD3-204ENST00000436070 FGD5Q6ZNL6 1462 aa20.33■□□□□ 0.84
SETD3-204ENST00000436070 CUX1P39880 1505 aa20.31■□□□□ 0.84
SETD3-204ENST00000436070 MAGI1Q96QZ7 1491 aaPredicted RBP20.28■□□□□ 0.84
SETD3-204ENST00000436070 TDRD9Q8NDG6 1382 aaKnown RBP20.27■□□□□ 0.84
SETD3-204ENST00000436070 ARAP1Q96P48 1450 aa20.27■□□□□ 0.84
SETD3-204ENST00000436070 CLASP1Q7Z460 1538 aa20.26■□□□□ 0.83
SETD3-204ENST00000436070 SNAPC4Q5SXM2 1469 aa20.26■□□□□ 0.83
SETD3-204ENST00000436070 GRIN2BQ13224 1484 aa20.24■□□□□ 0.83
SETD3-204ENST00000436070 PRKCSHP14314 528 aaPredicted RBP20.23■□□□□ 0.83
SETD3-204ENST00000436070 SYNJ1O43426 1573 aa20.22■□□□□ 0.83
SETD3-204ENST00000436070 CYB5RLQ6IPT4 315 aa20.22■□□□□ 0.83
SETD3-204ENST00000436070 FBLN2P98095 1184 aa20.21■□□□□ 0.83
SETD3-204ENST00000436070 SYNJ2O15056 1496 aa20.19■□□□□ 0.82
SETD3-204ENST00000436070 PBRM1Q86U86 1689 aa20.16■□□□□ 0.82
SETD3-204ENST00000436070 ERICH6Q7L0X2 663 aa20.15■□□□□ 0.82
SETD3-204ENST00000436070 ABCA10Q8WWZ4 1543 aa20.15■□□□□ 0.82
SETD3-204ENST00000436070 GAPVD1Q14C86 1478 aa20.14■□□□□ 0.81
SETD3-204ENST00000436070 CHMP7Q8WUX9 453 aaPredicted RBP20.14■□□□□ 0.81
SETD3-204ENST00000436070 ABCA5Q8WWZ7 1642 aa20.14■□□□□ 0.81
SETD3-204ENST00000436070 BCL11AQ9H165 835 aa20.11■□□□□ 0.81
SETD3-204ENST00000436070 PCGF6Q9BYE7 350 aa20.05■□□□□ 0.8
SETD3-204ENST00000436070 BIVM-ERCC5R4GMW8 1640 aa20.03■□□□□ 0.8
SETD3-204ENST00000436070 WRNQ14191 1432 aaPredicted RBP eCLIP20.02■□□□□ 0.79
SETD3-204ENST00000436070 TOP2BQ02880 1626 aa20.01■□□□□ 0.79
SETD3-204ENST00000436070 TRHP20396 242 aaPredicted RBP19.99■□□□□ 0.79
SETD3-204ENST00000436070 ADAMTS12P58397 1594 aa19.98■□□□□ 0.79
SETD3-204ENST00000436070 GRIN2AQ12879 1464 aa19.98■□□□□ 0.79
SETD3-204ENST00000436070 CENPBP07199 599 aaPredicted RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms