RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 AEBP2Q6ZN18 517 aaPredicted RBP21.25■□□□□ 0.99
TSR1-203ENST00000575049 CHIC1Q5VXU3 224 aa20.78■□□□□ 0.92
TSR1-203ENST00000575049 PHF23Q9BUL5 403 aaPredicted RBP18.27■□□□□ 0.52
TSR1-203ENST00000575049 SENP3Q9H4L4 574 aaPredicted RBP18.03■□□□□ 0.48
TSR1-203ENST00000575049 PLPPR3Q6T4P5 718 aa16.87■□□□□ 0.29
TSR1-203ENST00000575049 FOXD1Q16676 465 aa16.73■□□□□ 0.27
TSR1-203ENST00000575049 PPP6R1Q9UPN7 881 aa16.11■□□□□ 0.17
TSR1-203ENST00000575049 ADRA2BP18089 450 aa16.1■□□□□ 0.17
TSR1-203ENST00000575049 PIAS4Q8N2W9 510 aaPredicted RBP15.79■□□□□ 0.12
TSR1-203ENST00000575049 MSH5O43196 834 aa15.43■□□□□ 0.06
TSR1-203ENST00000575049 PPP4R3CPQ6ZMV5 832 aa14.87□□□□□ -0.03
TSR1-203ENST00000575049 SCAF1Q9H7N4 1312 aaKnown RBP14.72□□□□□ -0.05
TSR1-203ENST00000575049 MAPK8IP2Q13387 824 aaPredicted RBP14.6□□□□□ -0.07
TSR1-203ENST00000575049 KCNA4P22459 653 aa14.55□□□□□ -0.08
TSR1-203ENST00000575049 NCBP3Q53F19 620 aaKnown RBP14.48□□□□□ -0.09
TSR1-203ENST00000575049 CNKSR2Q8WXI2 1034 aa14.45□□□□□ -0.1
TSR1-203ENST00000575049 DMRT2Q9Y5R5 561 aa14.4□□□□□ -0.1
TSR1-203ENST00000575049 NPM3O75607 178 aaKnown RBP14.28□□□□□ -0.12
TSR1-203ENST00000575049 RNF216Q9NWF9 866 aaPredicted RBP14.16□□□□□ -0.14
TSR1-203ENST00000575049 HOXD11P31277 338 aaPredicted RBP14.11□□□□□ -0.15
TSR1-203ENST00000575049 POTEDQ86YR6 584 aa14.02□□□□□ -0.17
TSR1-203ENST00000575049 DNAJC5BQ9UF47 199 aa13.87□□□□□ -0.19
TSR1-203ENST00000575049 SLC4A1APQ9BWU0 796 aaKnown RBP13.86□□□□□ -0.19
TSR1-203ENST00000575049 DCAF8L1A6NGE4 600 aa13.77□□□□□ -0.21
TSR1-203ENST00000575049 SLC4A2P04920 1241 aa13.48□□□□□ -0.25
TSR1-203ENST00000575049 EHMT2Q96KQ7 1210 aa13.48□□□□□ -0.25
TSR1-203ENST00000575049 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.44□□□□□ -0.262e-6■■■■□ 19.8
TSR1-203ENST00000575049 ZBTB22O15209 634 aa13.39□□□□□ -0.27
TSR1-203ENST00000575049 FOXD4L1Q9NU39 408 aa13.39□□□□□ -0.27
TSR1-203ENST00000575049 CSRNP3Q8WYN3 585 aa13.32□□□□□ -0.28
TSR1-203ENST00000575049 U3KPZ7 1027 aaPredicted RBP13.24□□□□□ -0.29
TSR1-203ENST00000575049 RNF39Q9H2S5 420 aa13.22□□□□□ -0.29
TSR1-203ENST00000575049 MYCNP04198 464 aaPredicted RBP13.2□□□□□ -0.3
TSR1-203ENST00000575049 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.06□□□□□ -0.32
TSR1-203ENST00000575049 C1QBPQ07021 282 aaKnown RBP13.06□□□□□ -0.32
TSR1-203ENST00000575049 HNRNPUL2Q1KMD3 747 aaKnown RBP13.06□□□□□ -0.32
TSR1-203ENST00000575049 SAMD1Q6SPF0 538 aaPredicted RBP13.02□□□□□ -0.33
TSR1-203ENST00000575049 APLP2Q06481 763 aa12.92□□□□□ -0.34
TSR1-203ENST00000575049 ATXN8OSP0DMR3 200 aa12.91□□□□□ -0.34
TSR1-203ENST00000575049 CACNB1Q02641 598 aaPredicted RBP12.86□□□□□ -0.35
TSR1-203ENST00000575049 SPINK5Q9NQ38 1064 aaPredicted RBP12.86□□□□□ -0.35
TSR1-203ENST00000575049 ATF5Q9Y2D1 282 aaPredicted RBP12.84□□□□□ -0.35
TSR1-203ENST00000575049 CAPN15O75808 1086 aa12.8□□□□□ -0.36
TSR1-203ENST00000575049 ZNF219Q9P2Y4 722 aaPredicted RBP12.75□□□□□ -0.37
TSR1-203ENST00000575049 TRHP20396 242 aaPredicted RBP12.74□□□□□ -0.37
TSR1-203ENST00000575049 DSG3P32926 999 aa12.58□□□□□ -0.4
TSR1-203ENST00000575049 ABCB7O75027 752 aa12.57□□□□□ -0.4
TSR1-203ENST00000575049 POLA2Q14181 598 aa12.54□□□□□ -0.4
TSR1-203ENST00000575049 ZBTB12Q9Y330 459 aaPredicted RBP12.34□□□□□ -0.43
TSR1-203ENST00000575049 FBLN2P98095 1184 aa12.3□□□□□ -0.44
TSR1-203ENST00000575049 MKRN4PQ13434 485 aaPredicted RBP12.29□□□□□ -0.44
TSR1-203ENST00000575049 OSCARQ8IYS5 282 aa12.12□□□□□ -0.47
TSR1-203ENST00000575049 FKBP8Q14318 412 aa12.05□□□□□ -0.48
TSR1-203ENST00000575049 SPDYE2BA6NHP3 402 aa12.01□□□□□ -0.49
TSR1-203ENST00000575049 SPDYE4A6NLX3 237 aa12.01□□□□□ -0.49
TSR1-203ENST00000575049 SPDYE6P0CI01 402 aa12.01□□□□□ -0.49
TSR1-203ENST00000575049 SPDYE2Q495Y8 402 aa12.01□□□□□ -0.49
TSR1-203ENST00000575049 RBM42Q9BTD8 480 aaKnown RBP11.99□□□□□ -0.49
TSR1-203ENST00000575049 ZNF692Q9BU19 519 aaPredicted RBP11.96□□□□□ -0.49
TSR1-203ENST00000575049 SSUH2Q9Y2M2 353 aa11.92□□□□□ -0.5
TSR1-203ENST00000575049 AKT1S1Q96B36 256 aa11.85□□□□□ -0.51
TSR1-203ENST00000575049 PROM2Q8N271 834 aa11.83□□□□□ -0.52
TSR1-203ENST00000575049 PABPN1Q86U42 306 aaKnown RBP eCLIP11.8□□□□□ -0.52
TSR1-203ENST00000575049 REM2Q8IYK8 340 aaPredicted RBP11.73□□□□□ -0.53
TSR1-203ENST00000575049 SPDYE1Q8NFV5 336 aaPredicted RBP11.65□□□□□ -0.54
TSR1-203ENST00000575049 PITPNM1O00562 1244 aa11.61□□□□□ -0.55
TSR1-203ENST00000575049 STAG3Q9UJ98 1225 aa11.61□□□□□ -0.55
TSR1-203ENST00000575049 FBXO3Q9UK99 471 aa11.61□□□□□ -0.55
TSR1-203ENST00000575049 CLEC11AQ9Y240 323 aa11.6□□□□□ -0.55
TSR1-203ENST00000575049 PRR29P0C7W0 189 aa11.49□□□□□ -0.57
TSR1-203ENST00000575049 CHRDL2Q6WN34 429 aa11.49□□□□□ -0.57
TSR1-203ENST00000575049 VASPP50552 380 aaPredicted RBP11.46□□□□□ -0.57
TSR1-203ENST00000575049 MIER1Q8N108 512 aa11.39□□□□□ -0.59
TSR1-203ENST00000575049 FXR2P51116 673 aaKnown RBP eCLIP11.38□□□□□ -0.59
TSR1-203ENST00000575049 PLCD3Q8N3E9 789 aa11.38□□□□□ -0.59
TSR1-203ENST00000575049 SLC24A1O60721 1099 aa11.35□□□□□ -0.59
TSR1-203ENST00000575049 CREBZFQ9NS37 354 aa11.35□□□□□ -0.59
TSR1-203ENST00000575049 PIP4P2Q8N4L2 257 aa11.34□□□□□ -0.59
TSR1-203ENST00000575049 PLEKHG5O94827 1062 aa11.32□□□□□ -0.6
TSR1-203ENST00000575049 CHADLQ6NUI6 762 aa11.32□□□□□ -0.6
TSR1-203ENST00000575049 PRKAR2AP13861 404 aaKnown RBP11.31□□□□□ -0.6
TSR1-203ENST00000575049 IFNLR1Q8IU57 520 aaPredicted RBP11.3□□□□□ -0.6
TSR1-203ENST00000575049 KLHL34Q8N239 644 aa11.25□□□□□ -0.61
TSR1-203ENST00000575049 ZBTB47Q9UFB7 747 aaPredicted RBP11.25□□□□□ -0.61
TSR1-203ENST00000575049 MNX1P50219 401 aaPredicted RBP11.24□□□□□ -0.61
TSR1-203ENST00000575049 FARP1Q9Y4F1 1045 aaPredicted RBP11.21□□□□□ -0.61
TSR1-203ENST00000575049 NPM1P06748 294 aaKnown RBP eCLIP11.16□□□□□ -0.62
TSR1-203ENST00000575049 SPOCK2Q92563 424 aa11.16□□□□□ -0.62
TSR1-203ENST00000575049 POTEHQ6S545 545 aa11.11□□□□□ -0.63
TSR1-203ENST00000575049 NUBP1P53384 320 aa11.1□□□□□ -0.63
TSR1-203ENST00000575049 RASEFQ8IZ41 740 aa11.06□□□□□ -0.64
TSR1-203ENST00000575049 FAM212AQ96EL1 285 aa11.01□□□□□ -0.65
TSR1-203ENST00000575049 AMER1Q5JTC6 1135 aaPredicted RBP11□□□□□ -0.65
TSR1-203ENST00000575049 C19orf67A6NJJ6 358 aa10.99□□□□□ -0.65
TSR1-203ENST00000575049 CD44P16070 742 aaKnown RBP10.99□□□□□ -0.65
TSR1-203ENST00000575049 CIZ1Q9ULV3 898 aaPredicted RBP10.99□□□□□ -0.65
TSR1-203ENST00000575049 GSE1Q14687 1217 aa10.98□□□□□ -0.65
TSR1-203ENST00000575049 DCAF8Q5TAQ9 597 aa10.98□□□□□ -0.65
TSR1-203ENST00000575049 TSPYL2Q9H2G4 693 aaPredicted RBP10.98□□□□□ -0.65
TSR1-203ENST00000575049 HAX1O00165 279 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms