RNA–Protein interactions for RNA: ENST00000475367.1

SPTAN1-206, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-206ENST00000475367 NISCHQ9Y2I1 1504 aa21.9■■□□□ 1.1
SPTAN1-206ENST00000475367 CCDC180Q9P1Z9 1646 aa18.97■□□□□ 0.63
SPTAN1-206ENST00000475367 ZCCHC6Q5VYS8 1495 aaKnown RBP18.41■□□□□ 0.54
SPTAN1-206ENST00000475367 DCAF8L2P0C7V8 631 aa18.16■□□□□ 0.5
SPTAN1-206ENST00000475367 DCAF1Q9Y4B6 1507 aa18.06■□□□□ 0.48
SPTAN1-206ENST00000475367 SHROOM4Q9ULL8 1493 aa18.05■□□□□ 0.48
SPTAN1-206ENST00000475367 ABCC9O60706 1549 aa17.94■□□□□ 0.46
SPTAN1-206ENST00000475367 MYO15BQ96JP2 1530 aa17.78■□□□□ 0.44
SPTAN1-206ENST00000475367 NACADO15069 1562 aa17.67■□□□□ 0.42
SPTAN1-206ENST00000475367 SCRIBQ14160 1630 aa17.55■□□□□ 0.4
SPTAN1-206ENST00000475367 RB1CC1Q8TDY2 1594 aa17.5■□□□□ 0.39
SPTAN1-206ENST00000475367 SUPT5HO00267 1087 aaKnown RBP17.44■□□□□ 0.38
SPTAN1-206ENST00000475367 UNC13AQ9UPW8 1703 aa17.15■□□□□ 0.34
SPTAN1-206ENST00000475367 RSF1Q96T23 1441 aaPredicted RBP17.07■□□□□ 0.32
SPTAN1-206ENST00000475367 CECR2Q9BXF3 1484 aa17.05■□□□□ 0.32
SPTAN1-206ENST00000475367 BICRAQ9NZM4 1560 aa17■□□□□ 0.31
SPTAN1-206ENST00000475367 PABPN1Q86U42 306 aaKnown RBP eCLIP17■□□□□ 0.31
SPTAN1-206ENST00000475367 MROH2BQ7Z745 1585 aa16.95■□□□□ 0.3
SPTAN1-206ENST00000475367 BAZ1AQ9NRL2 1556 aaPredicted RBP16.88■□□□□ 0.29
SPTAN1-206ENST00000475367 WIZO95785 1651 aa16.81■□□□□ 0.28
SPTAN1-206ENST00000475367 SMARCA4P51532 1647 aa16.8■□□□□ 0.28
SPTAN1-206ENST00000475367 CHIC1Q5VXU3 224 aa16.74■□□□□ 0.27
SPTAN1-206ENST00000475367 TOP2AP11388 1531 aaKnown RBP16.62■□□□□ 0.25
SPTAN1-206ENST00000475367 PEG3Q9GZU2 1588 aa16.56■□□□□ 0.24
SPTAN1-206ENST00000475367 ATAD2BQ9ULI0 1458 aa16.51■□□□□ 0.23
SPTAN1-206ENST00000475367 CCDC88BA6NC98 1476 aa16.49■□□□□ 0.23
SPTAN1-206ENST00000475367 SMARCA2P51531 1590 aa16.48■□□□□ 0.23
SPTAN1-206ENST00000475367 EIF4G1Q04637 1599 aaKnown RBP16.46■□□□□ 0.23
SPTAN1-206ENST00000475367 BAZ1BQ9UIG0 1483 aaKnown RBP16.42■□□□□ 0.22
SPTAN1-206ENST00000475367 TRIM41Q8WV44 630 aa16.35■□□□□ 0.21
SPTAN1-206ENST00000475367 NCAPD3P42695 1498 aa16.33■□□□□ 0.2
SPTAN1-206ENST00000475367 HMGXB3Q12766 1538 aa16.29■□□□□ 0.2
SPTAN1-206ENST00000475367 CC2D2AQ9P2K1 1620 aa16.2■□□□□ 0.18
SPTAN1-206ENST00000475367 ABCC8Q09428 1581 aa16.18■□□□□ 0.18
SPTAN1-206ENST00000475367 LOC105371045A0A1W2PR82 267 aa16.14■□□□□ 0.17
SPTAN1-206ENST00000475367 FAM9AQ8IZU1 332 aaPredicted RBP16.11■□□□□ 0.17
SPTAN1-206ENST00000475367 WRNQ14191 1432 aaPredicted RBP eCLIP16.05■□□□□ 0.16
SPTAN1-206ENST00000475367 CFTRP13569 1480 aa16.01■□□□□ 0.15
SPTAN1-206ENST00000475367 SYNJ1O43426 1573 aa15.98■□□□□ 0.15
SPTAN1-206ENST00000475367 CADPSQ9ULU8 1353 aa15.95■□□□□ 0.14
SPTAN1-206ENST00000475367 SOGA1O94964 1423 aa15.92■□□□□ 0.14
SPTAN1-206ENST00000475367 EHMT2Q96KQ7 1210 aa15.91■□□□□ 0.14
SPTAN1-206ENST00000475367 TOP2BQ02880 1626 aa15.88■□□□□ 0.13
SPTAN1-206ENST00000475367 PRDM2Q13029 1718 aa15.87■□□□□ 0.13
SPTAN1-206ENST00000475367 RUSC2Q8N2Y8 1516 aa15.87■□□□□ 0.13
SPTAN1-206ENST00000475367 EEA1Q15075 1411 aa15.85■□□□□ 0.13
SPTAN1-206ENST00000475367 DNAJC5BQ9UF47 199 aa15.85■□□□□ 0.13
SPTAN1-206ENST00000475367 BIVM-ERCC5R4GMW8 1640 aa15.84■□□□□ 0.13
SPTAN1-206ENST00000475367 CUX1P39880 1505 aa15.83■□□□□ 0.13
SPTAN1-206ENST00000475367 CSRNP3Q8WYN3 585 aa15.82■□□□□ 0.12
SPTAN1-206ENST00000475367 NESP48681 1621 aa15.79■□□□□ 0.12
SPTAN1-206ENST00000475367 FANCD2Q9BXW9 1451 aa15.77■□□□□ 0.12
SPTAN1-206ENST00000475367 LAMC3Q9Y6N6 1575 aa15.73■□□□□ 0.11
SPTAN1-206ENST00000475367 GOLGA3Q08378 1498 aa15.66■□□□□ 0.1
SPTAN1-206ENST00000475367 UBTFP17480 764 aaKnown RBP15.66■□□□□ 0.1
SPTAN1-206ENST00000475367 TNIKQ9UKE5 1360 aa15.65■□□□□ 0.1
SPTAN1-206ENST00000475367 CEP164Q9UPV0 1460 aa15.65■□□□□ 0.1
SPTAN1-206ENST00000475367 PDS5BQ9NTI5 1447 aa15.64■□□□□ 0.09
SPTAN1-206ENST00000475367 FGD5Q6ZNL6 1462 aa15.64■□□□□ 0.09
SPTAN1-206ENST00000475367 KIF21BO75037 1637 aa15.64■□□□□ 0.09
SPTAN1-206ENST00000475367 KIF27Q86VH2 1401 aa15.63■□□□□ 0.09
SPTAN1-206ENST00000475367 DNMBPQ6XZF7 1577 aa15.62■□□□□ 0.09
SPTAN1-206ENST00000475367 TOPBP1Q92547 1522 aa15.61■□□□□ 0.09
SPTAN1-206ENST00000475367 CEP162Q5TB80 1403 aa15.59■□□□□ 0.09
SPTAN1-206ENST00000475367 CUX2O14529 1486 aa15.58■□□□□ 0.08
SPTAN1-206ENST00000475367 RAPGEF2Q9Y4G8 1499 aa15.58■□□□□ 0.08
SPTAN1-206ENST00000475367 URB2Q14146 1524 aaKnown RBP15.58■□□□□ 0.08
SPTAN1-206ENST00000475367 KIF21AQ7Z4S6 1674 aa15.55■□□□□ 0.08
SPTAN1-206ENST00000475367 PRXQ9BXM0 1461 aa15.55■□□□□ 0.08
SPTAN1-206ENST00000475367 POLA1P09884 1462 aaPredicted RBP15.54■□□□□ 0.08
SPTAN1-206ENST00000475367 RAD54L2Q9Y4B4 1467 aa15.53■□□□□ 0.08
SPTAN1-206ENST00000475367 PCGF6Q9BYE7 350 aa15.52■□□□□ 0.07
SPTAN1-206ENST00000475367 IGF1RP08069 1367 aa15.51■□□□□ 0.07
SPTAN1-206ENST00000475367 ERICH3Q5RHP9 1530 aa15.51■□□□□ 0.07
SPTAN1-206ENST00000475367 ABCA10Q8WWZ4 1543 aa15.49■□□□□ 0.07
SPTAN1-206ENST00000475367 TRIM26Q12899 539 aaPredicted RBP15.45■□□□□ 0.06
SPTAN1-206ENST00000475367 CLIP1P30622 1438 aa15.44■□□□□ 0.06
SPTAN1-206ENST00000475367 MRC2Q9UBG0 1479 aa15.43■□□□□ 0.06
SPTAN1-206ENST00000475367 CARMIL1Q5VZK9 1371 aa15.42■□□□□ 0.06
SPTAN1-206ENST00000475367 RANGAP1P46060 587 aaPredicted RBP15.41■□□□□ 0.06
SPTAN1-206ENST00000475367 PPARGC1BQ86YN6 1023 aaKnown RBP15.4■□□□□ 0.06
SPTAN1-206ENST00000475367 WDR97A6NE52 1622 aa15.39■□□□□ 0.05
SPTAN1-206ENST00000475367 TDRD9Q8NDG6 1382 aaKnown RBP15.38■□□□□ 0.05
SPTAN1-206ENST00000475367 ERCC6Q03468 1493 aa15.36■□□□□ 0.05
SPTAN1-206ENST00000475367 TARBP1Q13395 1621 aaKnown RBP15.35■□□□□ 0.05
SPTAN1-206ENST00000475367 ABCA5Q8WWZ7 1642 aa15.34■□□□□ 0.05
SPTAN1-206ENST00000475367 GAPVD1Q14C86 1478 aa15.33■□□□□ 0.04
SPTAN1-206ENST00000475367 WDR62O43379 1518 aa15.33■□□□□ 0.04
SPTAN1-206ENST00000475367 VPS8Q8N3P4 1428 aa15.3■□□□□ 0.04
SPTAN1-206ENST00000475367 CUL7Q14999 1698 aa15.3■□□□□ 0.04
SPTAN1-206ENST00000475367 ARAP1Q96P48 1450 aa15.27■□□□□ 0.04
SPTAN1-206ENST00000475367 IFT140Q96RY7 1462 aa15.26■□□□□ 0.03
SPTAN1-206ENST00000475367 TTBK1Q5TCY1 1321 aaPredicted RBP15.25■□□□□ 0.03
SPTAN1-206ENST00000475367 AQRO60306 1485 aaKnown RBP eCLIP15.25■□□□□ 0.03
SPTAN1-206ENST00000475367 THOC2Q8NI27 1593 aaKnown RBP15.25■□□□□ 0.03
SPTAN1-206ENST00000475367 ARHGAP35Q9NRY4 1499 aa15.24■□□□□ 0.03
SPTAN1-206ENST00000475367 ZNF608Q9ULD9 1512 aaPredicted RBP15.21■□□□□ 0.03
SPTAN1-206ENST00000475367 PBRM1Q86U86 1689 aa15.2■□□□□ 0.02
SPTAN1-206ENST00000475367 APLP2Q06481 763 aa15.19■□□□□ 0.02
SPTAN1-206ENST00000475367 GRIN2BQ13224 1484 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms