RNA–Protein interactions for RNA: ENST00000459689.1

SUPT3H-204, Transcript of SPT3 homolog, SAGA and STAGA complex component, humanhuman

TSL 2

Gene SUPT3H, Length 396 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3H-204ENST00000459689 AEBP2Q6ZN18 517 aaPredicted RBP28.68■■■□□ 2.18
SUPT3H-204ENST00000459689 CHIC1Q5VXU3 224 aa27.69■■■□□ 2.02
SUPT3H-204ENST00000459689 PHF23Q9BUL5 403 aaPredicted RBP24.4■■□□□ 1.5
SUPT3H-204ENST00000459689 SENP3Q9H4L4 574 aaPredicted RBP24.24■■□□□ 1.47
SUPT3H-204ENST00000459689 FOXD1Q16676 465 aa22.6■■□□□ 1.21
SUPT3H-204ENST00000459689 PLPPR3Q6T4P5 718 aa22.3■■□□□ 1.16
SUPT3H-204ENST00000459689 PPP6R1Q9UPN7 881 aa21.59■■□□□ 1.05
SUPT3H-204ENST00000459689 ADRA2BP18089 450 aa21.49■■□□□ 1.03
SUPT3H-204ENST00000459689 PIAS4Q8N2W9 510 aaPredicted RBP21.18■□□□□ 0.98
SUPT3H-204ENST00000459689 MSH5O43196 834 aa20.85■□□□□ 0.93
SUPT3H-204ENST00000459689 PPP4R3CPQ6ZMV5 832 aa19.65■□□□□ 0.74
SUPT3H-204ENST00000459689 MAPK8IP2Q13387 824 aaPredicted RBP19.59■□□□□ 0.73
SUPT3H-204ENST00000459689 SCAF1Q9H7N4 1312 aaKnown RBP19.51■□□□□ 0.71
SUPT3H-204ENST00000459689 POTEDQ86YR6 584 aa19.5■□□□□ 0.71
SUPT3H-204ENST00000459689 DMRT2Q9Y5R5 561 aa19.36■□□□□ 0.69
SUPT3H-204ENST00000459689 CNKSR2Q8WXI2 1034 aa19.13■□□□□ 0.65
SUPT3H-204ENST00000459689 KCNA4P22459 653 aa18.95■□□□□ 0.62
SUPT3H-204ENST00000459689 NCBP3Q53F19 620 aaKnown RBP18.95■□□□□ 0.62
SUPT3H-204ENST00000459689 HOXD11P31277 338 aaPredicted RBP18.89■□□□□ 0.61
SUPT3H-204ENST00000459689 RNF216Q9NWF9 866 aaPredicted RBP18.84■□□□□ 0.61
SUPT3H-204ENST00000459689 NPM3O75607 178 aaKnown RBP18.83■□□□□ 0.6
SUPT3H-204ENST00000459689 DNAJC5BQ9UF47 199 aa18.39■□□□□ 0.53
SUPT3H-204ENST00000459689 DCAF8L1A6NGE4 600 aa18.38■□□□□ 0.53
SUPT3H-204ENST00000459689 SLC4A1APQ9BWU0 796 aaKnown RBP17.92■□□□□ 0.46
SUPT3H-204ENST00000459689 RNF39Q9H2S5 420 aa17.92■□□□□ 0.46
SUPT3H-204ENST00000459689 SLC4A2P04920 1241 aa17.88■□□□□ 0.45
SUPT3H-204ENST00000459689 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.85■□□□□ 0.45
SUPT3H-204ENST00000459689 U3KPZ7 1027 aaPredicted RBP17.68■□□□□ 0.42
SUPT3H-204ENST00000459689 C1QBPQ07021 282 aaKnown RBP17.62■□□□□ 0.41
SUPT3H-204ENST00000459689 ZBTB22O15209 634 aa17.52■□□□□ 0.4
SUPT3H-204ENST00000459689 CACNB1Q02641 598 aaPredicted RBP17.51■□□□□ 0.39
SUPT3H-204ENST00000459689 FOXD4L1Q9NU39 408 aa17.47■□□□□ 0.39
SUPT3H-204ENST00000459689 MYCNP04198 464 aaPredicted RBP17.34■□□□□ 0.37
SUPT3H-204ENST00000459689 SPINK5Q9NQ38 1064 aaPredicted RBP17.25■□□□□ 0.35
SUPT3H-204ENST00000459689 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.21■□□□□ 0.35
SUPT3H-204ENST00000459689 HNRNPUL2Q1KMD3 747 aaKnown RBP17.21■□□□□ 0.35
SUPT3H-204ENST00000459689 SAMD1Q6SPF0 538 aaPredicted RBP17.17■□□□□ 0.34
SUPT3H-204ENST00000459689 CSRNP3Q8WYN3 585 aa17.14■□□□□ 0.33
SUPT3H-204ENST00000459689 EHMT2Q96KQ7 1210 aa17.12■□□□□ 0.33
SUPT3H-204ENST00000459689 CAPN15O75808 1086 aa17.07■□□□□ 0.32
SUPT3H-204ENST00000459689 APLP2Q06481 763 aa17.04■□□□□ 0.32
SUPT3H-204ENST00000459689 ATF5Q9Y2D1 282 aaPredicted RBP17■□□□□ 0.31
SUPT3H-204ENST00000459689 DSG3P32926 999 aa16.96■□□□□ 0.31
SUPT3H-204ENST00000459689 TRHP20396 242 aaPredicted RBP16.94■□□□□ 0.3
SUPT3H-204ENST00000459689 ZNF219Q9P2Y4 722 aaPredicted RBP16.94■□□□□ 0.3
SUPT3H-204ENST00000459689 ATXN8OSP0DMR3 200 aa16.87■□□□□ 0.29
SUPT3H-204ENST00000459689 ABCB7O75027 752 aa16.78■□□□□ 0.28
SUPT3H-204ENST00000459689 POLA2Q14181 598 aa16.65■□□□□ 0.26
SUPT3H-204ENST00000459689 ZBTB12Q9Y330 459 aaPredicted RBP16.29■□□□□ 0.2
SUPT3H-204ENST00000459689 MKRN4PQ13434 485 aaPredicted RBP16.25■□□□□ 0.19
SUPT3H-204ENST00000459689 OSCARQ8IYS5 282 aa16.14■□□□□ 0.17
SUPT3H-204ENST00000459689 FBLN2P98095 1184 aa16.11■□□□□ 0.17
SUPT3H-204ENST00000459689 RBM42Q9BTD8 480 aaKnown RBP16.06■□□□□ 0.16
SUPT3H-204ENST00000459689 SPDYE2BA6NHP3 402 aa15.89■□□□□ 0.13
SUPT3H-204ENST00000459689 SPDYE6P0CI01 402 aa15.89■□□□□ 0.13
SUPT3H-204ENST00000459689 SPDYE2Q495Y8 402 aa15.89■□□□□ 0.13
SUPT3H-204ENST00000459689 AKT1S1Q96B36 256 aa15.85■□□□□ 0.13
SUPT3H-204ENST00000459689 SSUH2Q9Y2M2 353 aa15.82■□□□□ 0.12
SUPT3H-204ENST00000459689 ZNF692Q9BU19 519 aaPredicted RBP15.74■□□□□ 0.11
SUPT3H-204ENST00000459689 REM2Q8IYK8 340 aaPredicted RBP15.72■□□□□ 0.11
SUPT3H-204ENST00000459689 SPDYE4A6NLX3 237 aa15.64■□□□□ 0.09
SUPT3H-204ENST00000459689 PITPNM1O00562 1244 aa15.58■□□□□ 0.08
SUPT3H-204ENST00000459689 PABPN1Q86U42 306 aaKnown RBP eCLIP15.57■□□□□ 0.08
SUPT3H-204ENST00000459689 CHRDL2Q6WN34 429 aa15.55■□□□□ 0.08
SUPT3H-204ENST00000459689 PROM2Q8N271 834 aa15.5■□□□□ 0.07
SUPT3H-204ENST00000459689 SPDYE1Q8NFV5 336 aaPredicted RBP15.45■□□□□ 0.06
SUPT3H-204ENST00000459689 FKBP8Q14318 412 aa15.42■□□□□ 0.06
SUPT3H-204ENST00000459689 CLEC11AQ9Y240 323 aa15.36■□□□□ 0.05
SUPT3H-204ENST00000459689 POTEHQ6S545 545 aa15.35■□□□□ 0.05
SUPT3H-204ENST00000459689 FXR2P51116 673 aaKnown RBP eCLIP15.34■□□□□ 0.05
SUPT3H-204ENST00000459689 PIP4P2Q8N4L2 257 aa15.33■□□□□ 0.04
SUPT3H-204ENST00000459689 PRR29P0C7W0 189 aa15.19■□□□□ 0.02
SUPT3H-204ENST00000459689 STAG3Q9UJ98 1225 aa15.19■□□□□ 0.02
SUPT3H-204ENST00000459689 PRKAR2AP13861 404 aaKnown RBP15.12■□□□□ 0.01
SUPT3H-204ENST00000459689 CHADLQ6NUI6 762 aa15.1■□□□□ 0.01
SUPT3H-204ENST00000459689 CREBZFQ9NS37 354 aa15.06■□□□□ 0
SUPT3H-204ENST00000459689 MNX1P50219 401 aaPredicted RBP14.94□□□□□ -0.02
SUPT3H-204ENST00000459689 FARP1Q9Y4F1 1045 aaPredicted RBP14.92□□□□□ -0.02
SUPT3H-204ENST00000459689 FBXO3Q9UK99 471 aa14.87□□□□□ -0.03
SUPT3H-204ENST00000459689 C19orf67A6NJJ6 358 aa14.83□□□□□ -0.04
SUPT3H-204ENST00000459689 EVX2Q03828 476 aa14.82□□□□□ -0.04
SUPT3H-204ENST00000459689 MIER1Q8N108 512 aa14.79□□□□□ -0.04
SUPT3H-204ENST00000459689 HAX1O00165 279 aa14.78□□□□□ -0.04
SUPT3H-204ENST00000459689 VASPP50552 380 aaPredicted RBP14.77□□□□□ -0.05
SUPT3H-204ENST00000459689 PLCD3Q8N3E9 789 aa14.73□□□□□ -0.05
SUPT3H-204ENST00000459689 CD44P16070 742 aaKnown RBP14.67□□□□□ -0.06
SUPT3H-204ENST00000459689 NPM1P06748 294 aaKnown RBP eCLIP14.66□□□□□ -0.06
SUPT3H-204ENST00000459689 SP7Q8TDD2 431 aaPredicted RBP14.65□□□□□ -0.06
SUPT3H-204ENST00000459689 PLEKHG5O94827 1062 aa14.64□□□□□ -0.07
SUPT3H-204ENST00000459689 IFNLR1Q8IU57 520 aaPredicted RBP14.6□□□□□ -0.07
SUPT3H-204ENST00000459689 NUBP1P53384 320 aa14.58□□□□□ -0.08
SUPT3H-204ENST00000459689 RASEFQ8IZ41 740 aa14.57□□□□□ -0.08
SUPT3H-204ENST00000459689 ZBTB47Q9UFB7 747 aaPredicted RBP14.57□□□□□ -0.08
SUPT3H-204ENST00000459689 ZNF579Q8NAF0 562 aaKnown RBP14.52□□□□□ -0.09
SUPT3H-204ENST00000459689 ZRANB1Q9UGI0 708 aa14.52□□□□□ -0.09
SUPT3H-204ENST00000459689 CCDC61Q9Y6R9 512 aa14.47□□□□□ -0.09
SUPT3H-204ENST00000459689 TSPYL2Q9H2G4 693 aaPredicted RBP14.46□□□□□ -0.09
SUPT3H-204ENST00000459689 GABBR2O75899 941 aa14.44□□□□□ -0.1
SUPT3H-204ENST00000459689 PAK3O75914 559 aaPredicted RBP14.44□□□□□ -0.1
SUPT3H-204ENST00000459689 KLHL34Q8N239 644 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms