Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
SATB2Q9UPW6 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SATB2Q9UPW6 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
SATB2Q9UPW6 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 SMIM10L1-201ENST00000622602 4795 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 PCDHGA12-201ENST00000252085 4747 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 USP17L6P-201ENST00000382470 1197 ntBASIC13.48□□□□□ -0.25
SATB2Q9UPW6 MIR566-201ENST00000385187 94 ntBASIC13.48□□□□□ -0.25
SATB2Q9UPW6 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 AC026470.1-201ENST00000478038 846 ntBASIC13.48□□□□□ -0.25
SATB2Q9UPW6 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 OR2A1-AS1-210ENST00000496968 531 ntBASIC13.48□□□□□ -0.25
SATB2Q9UPW6 AC090136.2-201ENST00000517809 420 ntBASIC13.48□□□□□ -0.25
SATB2Q9UPW6 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 MAX-218ENST00000557746 571 ntTSL 4 BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 AL139339.2-201ENST00000608063 657 ntBASIC13.48□□□□□ -0.25
SATB2Q9UPW6 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 LINC01544-201ENST00000567801 5168 ntTSL 2 BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 TRIM80P-201ENST00000455685 2848 ntBASIC13.48□□□□□ -0.25
SATB2Q9UPW6 AC007614.4-201ENST00000564048 1827 ntBASIC13.48□□□□□ -0.25
SATB2Q9UPW6 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SATB2Q9UPW6 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SATB2Q9UPW6 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.47□□□□□ -0.25
SATB2Q9UPW6 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC13.47□□□□□ -0.25
SATB2Q9UPW6 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SATB2Q9UPW6 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SATB2Q9UPW6 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
SATB2Q9UPW6 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SATB2Q9UPW6 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.47□□□□□ -0.25
SATB2Q9UPW6 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SATB2Q9UPW6 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SATB2Q9UPW6 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC13.47□□□□□ -0.25
SATB2Q9UPW6 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
SATB2Q9UPW6 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SATB2Q9UPW6 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SATB2Q9UPW6 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC13.47□□□□□ -0.25
SATB2Q9UPW6 ODCP-201ENST00000459650 1639 ntBASIC13.47□□□□□ -0.25
SATB2Q9UPW6 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SATB2Q9UPW6 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.47□□□□□ -0.25
SATB2Q9UPW6 AC019109.1-201ENST00000401725 1874 ntBASIC13.47□□□□□ -0.25
SATB2Q9UPW6 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
SATB2Q9UPW6 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SATB2Q9UPW6 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.47□□□□□ -0.25
SATB2Q9UPW6 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SATB2Q9UPW6 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SATB2Q9UPW6 OR7E115P-201ENST00000382617 1024 ntBASIC13.47□□□□□ -0.25
SATB2Q9UPW6 LINC00265-2P-201ENST00000413372 782 ntBASIC13.47□□□□□ -0.25
SATB2Q9UPW6 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms