RNA–Protein interactions for RNA: ENST00000252085.3

PCDHGA12-201, Transcript of protocadherin gamma subfamily A, 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA12, Length 4,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12-201ENST00000252085 NISCHQ9Y2I1 1504 aa22.4■■□□□ 1.18
PCDHGA12-201ENST00000252085 DCAF8L2P0C7V8 631 aa22.31■■□□□ 1.16
PCDHGA12-201ENST00000252085 SUPT5HO00267 1087 aaKnown RBP21.41■■□□□ 1.02
PCDHGA12-201ENST00000252085 SHROOM4Q9ULL8 1493 aa21.21■□□□□ 0.99
PCDHGA12-201ENST00000252085 EHMT2Q96KQ7 1210 aa20.45■□□□□ 0.86
PCDHGA12-201ENST00000252085 PELP1Q8IZL8 1130 aaKnown RBP20.19■□□□□ 0.82
PCDHGA12-201ENST00000252085 FAM9AQ8IZU1 332 aaPredicted RBP20.11■□□□□ 0.81
PCDHGA12-201ENST00000252085 MYT1Q01538 1121 aa20.09■□□□□ 0.81
PCDHGA12-201ENST00000252085 PCGF6Q9BYE7 350 aa19.92■□□□□ 0.78
PCDHGA12-201ENST00000252085 APLP2Q06481 763 aa19.88■□□□□ 0.77
PCDHGA12-201ENST00000252085 TRIM41Q8WV44 630 aa19.83■□□□□ 0.77
PCDHGA12-201ENST00000252085 TTBK1Q5TCY1 1321 aaPredicted RBP19.75■□□□□ 0.75
PCDHGA12-201ENST00000252085 RANGAP1P46060 587 aaPredicted RBP19.55■□□□□ 0.72
PCDHGA12-201ENST00000252085 UBTFP17480 764 aaKnown RBP19.45■□□□□ 0.7
PCDHGA12-201ENST00000252085 ZEB1P37275 1124 aaPredicted RBP19.41■□□□□ 0.7
PCDHGA12-201ENST00000252085 CCER1Q8TC90 406 aaPredicted RBP19.39■□□□□ 0.69
PCDHGA12-201ENST00000252085 CHIC1Q5VXU3 224 aa19.36■□□□□ 0.69
PCDHGA12-201ENST00000252085 ATP1B4Q9UN42 357 aaPredicted RBP19.25■□□□□ 0.67
PCDHGA12-201ENST00000252085 PPARGC1BQ86YN6 1023 aaKnown RBP19.25■□□□□ 0.67
PCDHGA12-201ENST00000252085 LOC105371045A0A1W2PR82 267 aa19.23■□□□□ 0.67
PCDHGA12-201ENST00000252085 CENPBP07199 599 aaPredicted RBP19.19■□□□□ 0.66
PCDHGA12-201ENST00000252085 TRIM26Q12899 539 aaPredicted RBP19.17■□□□□ 0.66
PCDHGA12-201ENST00000252085 ERICH6Q7L0X2 663 aa19.07■□□□□ 0.64
PCDHGA12-201ENST00000252085 HRCP23327 699 aa19.02■□□□□ 0.64
PCDHGA12-201ENST00000252085 ABCC9O60706 1549 aa19■□□□□ 0.63
PCDHGA12-201ENST00000252085 PABPN1Q86U42 306 aaKnown RBP eCLIP18.83■□□□□ 0.6
PCDHGA12-201ENST00000252085 YTHDC1Q96MU7 727 aaKnown RBP18.81■□□□□ 0.6
PCDHGA12-201ENST00000252085 ITGAEP38570 1179 aa18.77■□□□□ 0.59
PCDHGA12-201ENST00000252085 HNRNPUL2Q1KMD3 747 aaKnown RBP18.76■□□□□ 0.59
PCDHGA12-201ENST00000252085 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.62■□□□□ 0.57
PCDHGA12-201ENST00000252085 ZCCHC6Q5VYS8 1495 aaKnown RBP18.6■□□□□ 0.57
PCDHGA12-201ENST00000252085 NEFLP07196 543 aa18.57■□□□□ 0.56
PCDHGA12-201ENST00000252085 SCRIBQ14160 1630 aa18.36■□□□□ 0.53
PCDHGA12-201ENST00000252085 DIEXFQ68CQ4 756 aaKnown RBP18.36■□□□□ 0.53
PCDHGA12-201ENST00000252085 FAM50AQ14320 339 aaKnown RBP18.34■□□□□ 0.53
PCDHGA12-201ENST00000252085 POLR3GLQ9BT43 218 aa18.34■□□□□ 0.53
PCDHGA12-201ENST00000252085 CSRNP3Q8WYN3 585 aa18.33■□□□□ 0.53
PCDHGA12-201ENST00000252085 CCDC180Q9P1Z9 1646 aa18.32■□□□□ 0.52
PCDHGA12-201ENST00000252085 MYT1LQ9UL68 1186 aa18.31■□□□□ 0.52
PCDHGA12-201ENST00000252085 CNGB1Q14028 1251 aaPredicted RBP18.21■□□□□ 0.51
PCDHGA12-201ENST00000252085 NEUROD1Q13562 356 aa18.15■□□□□ 0.5
PCDHGA12-201ENST00000252085 TRIM52Q96A61 297 aa18.14■□□□□ 0.49
PCDHGA12-201ENST00000252085 P3H3Q8IVL6 736 aa18.1■□□□□ 0.49
PCDHGA12-201ENST00000252085 DCAF1Q9Y4B6 1507 aa18.06■□□□□ 0.48
PCDHGA12-201ENST00000252085 ZNF316A6NFI3 1004 aaPredicted RBP18.03■□□□□ 0.48
PCDHGA12-201ENST00000252085 FBLN2P98095 1184 aa18.02■□□□□ 0.47
PCDHGA12-201ENST00000252085 RSF1Q96T23 1441 aaPredicted RBP17.97■□□□□ 0.47
PCDHGA12-201ENST00000252085 GTF3C3Q9Y5Q9 886 aa17.94■□□□□ 0.46
PCDHGA12-201ENST00000252085 ARID3CA6NKF2 412 aa17.93■□□□□ 0.46
PCDHGA12-201ENST00000252085 RTL5Q5HYW3 569 aaPredicted RBP17.93■□□□□ 0.46
PCDHGA12-201ENST00000252085 MYO15BQ96JP2 1530 aa17.92■□□□□ 0.46
PCDHGA12-201ENST00000252085 ZNF326Q5BKZ1 582 aaKnown RBP17.89■□□□□ 0.45
PCDHGA12-201ENST00000252085 ANP32CO43423 234 aa17.87■□□□□ 0.45
PCDHGA12-201ENST00000252085 SLC4A1APQ9BWU0 796 aaKnown RBP17.86■□□□□ 0.45
PCDHGA12-201ENST00000252085 RB1CC1Q8TDY2 1594 aa17.84■□□□□ 0.45
PCDHGA12-201ENST00000252085 DAXXQ9UER7 740 aaPredicted RBP17.82■□□□□ 0.44
PCDHGA12-201ENST00000252085 NACADO15069 1562 aa17.77■□□□□ 0.43
PCDHGA12-201ENST00000252085 BCANQ96GW7 911 aa17.77■□□□□ 0.43
PCDHGA12-201ENST00000252085 ACIN1Q9UKV3 1341 aaKnown RBP17.75■□□□□ 0.43
PCDHGA12-201ENST00000252085 ZNF777Q9ULD5 760 aaPredicted RBP17.74■□□□□ 0.43
PCDHGA12-201ENST00000252085 CDK11AQ9UQ88 783 aaPredicted RBP17.73■□□□□ 0.43
PCDHGA12-201ENST00000252085 CLIP1P30622 1438 aa17.7■□□□□ 0.42
PCDHGA12-201ENST00000252085 EEA1Q15075 1411 aa17.65■□□□□ 0.42
PCDHGA12-201ENST00000252085 WRNQ14191 1432 aaPredicted RBP eCLIP17.63■□□□□ 0.41
PCDHGA12-201ENST00000252085 CECR2Q9BXF3 1484 aa17.63■□□□□ 0.41
PCDHGA12-201ENST00000252085 CEP162Q5TB80 1403 aa17.63■□□□□ 0.41
PCDHGA12-201ENST00000252085 TONSLQ96HA7 1378 aa17.62■□□□□ 0.41
PCDHGA12-201ENST00000252085 GOLGA3Q08378 1498 aa17.6■□□□□ 0.41
PCDHGA12-201ENST00000252085 CLSPNQ9HAW4 1339 aa17.59■□□□□ 0.41
PCDHGA12-201ENST00000252085 CHIC2Q9UKJ5 165 aa17.57■□□□□ 0.4
PCDHGA12-201ENST00000252085 BAZ1BQ9UIG0 1483 aaKnown RBP17.56■□□□□ 0.4
PCDHGA12-201ENST00000252085 EIF5BO60841 1220 aaKnown RBP17.55■□□□□ 0.4
PCDHGA12-201ENST00000252085 DDX10Q13206 875 aaKnown RBP17.55■□□□□ 0.4
PCDHGA12-201ENST00000252085 BAZ1AQ9NRL2 1556 aaPredicted RBP17.54■□□□□ 0.4
PCDHGA12-201ENST00000252085 MTUS2Q5JR59 1369 aa17.53■□□□□ 0.4
PCDHGA12-201ENST00000252085 TNIKQ9UKE5 1360 aa17.52■□□□□ 0.4
PCDHGA12-201ENST00000252085 GLIPR1L2Q4G1C9 344 aa17.46■□□□□ 0.39
PCDHGA12-201ENST00000252085 CEP164Q9UPV0 1460 aa17.44■□□□□ 0.38
PCDHGA12-201ENST00000252085 KIF27Q86VH2 1401 aa17.44■□□□□ 0.38
PCDHGA12-201ENST00000252085 CHMP7Q8WUX9 453 aaPredicted RBP17.42■□□□□ 0.38
PCDHGA12-201ENST00000252085 MIER1Q8N108 512 aa17.41■□□□□ 0.38
PCDHGA12-201ENST00000252085 SCAF1Q9H7N4 1312 aaKnown RBP17.4■□□□□ 0.38
PCDHGA12-201ENST00000252085 HNRNPUQ00839 825 aaKnown RBP eCLIP17.39■□□□□ 0.38
PCDHGA12-201ENST00000252085 MROH2BQ7Z745 1585 aa17.39■□□□□ 0.37
PCDHGA12-201ENST00000252085 FKBP8Q14318 412 aa17.38■□□□□ 0.37
PCDHGA12-201ENST00000252085 TSPY4P0CV99 314 aa17.37■□□□□ 0.37
PCDHGA12-201ENST00000252085 TSPY10P0CW01 314 aa17.37■□□□□ 0.37
PCDHGA12-201ENST00000252085 SOGA1O94964 1423 aa17.36■□□□□ 0.37
PCDHGA12-201ENST00000252085 HIRIP3Q9BW71 556 aaPredicted RBP17.36■□□□□ 0.37
PCDHGA12-201ENST00000252085 RRP7BPQ9NSQ0 103 aa17.36■□□□□ 0.37
PCDHGA12-201ENST00000252085 FAM9BQ8IZU0 186 aa17.35■□□□□ 0.37
PCDHGA12-201ENST00000252085 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.34■□□□□ 0.37
PCDHGA12-201ENST00000252085 CHGAP10645 457 aaKnown RBP17.32■□□□□ 0.36
PCDHGA12-201ENST00000252085 CANXP27824 592 aaKnown RBP17.32■□□□□ 0.36
PCDHGA12-201ENST00000252085 NPM1P06748 294 aaKnown RBP eCLIP17.29■□□□□ 0.36
PCDHGA12-201ENST00000252085 CCDC88BA6NC98 1476 aa17.28■□□□□ 0.36
PCDHGA12-201ENST00000252085 KDM2AQ9Y2K7 1162 aa17.28■□□□□ 0.36
PCDHGA12-201ENST00000252085 NEFMP07197 916 aa17.25■□□□□ 0.35
PCDHGA12-201ENST00000252085 EIF4G2P78344 907 aaKnown RBP eCLIP17.23■□□□□ 0.35
PCDHGA12-201ENST00000252085 BCL11AQ9H165 835 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms