RNA–Protein interactions for RNA: ENST00000616795.1

CCDC113-206, Transcript of coiled-coil domain containing 113, humanhuman

TSL 5 BASIC

Gene CCDC113, Length 891 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-206ENST00000616795 NISCHQ9Y2I1 1504 aa33.58■■■□□ 2.97
CCDC113-206ENST00000616795 CCDC180Q9P1Z9 1646 aa29.96■■■□□ 2.39
CCDC113-206ENST00000616795 ABCC9O60706 1549 aa29.47■■■□□ 2.31
CCDC113-206ENST00000616795 RB1CC1Q8TDY2 1594 aa28.24■■■□□ 2.11
CCDC113-206ENST00000616795 NACADO15069 1562 aa28.16■■■□□ 2.1
CCDC113-206ENST00000616795 DCAF8L2P0C7V8 631 aa28.06■■■□□ 2.08
CCDC113-206ENST00000616795 ZCCHC6Q5VYS8 1495 aaKnown RBP27.95■■■□□ 2.06
CCDC113-206ENST00000616795 MYO15BQ96JP2 1530 aa27.92■■■□□ 2.06
CCDC113-206ENST00000616795 DCAF1Q9Y4B6 1507 aa27.76■■■□□ 2.03
CCDC113-206ENST00000616795 UNC13AQ9UPW8 1703 aa27.73■■■□□ 2.03
CCDC113-206ENST00000616795 PABPN1Q86U42 306 aaKnown RBP eCLIP27.48■■□□□ 1.99
CCDC113-206ENST00000616795 BICRAQ9NZM4 1560 aa27.46■■□□□ 1.99
CCDC113-206ENST00000616795 SCRIBQ14160 1630 aa27.34■■□□□ 1.97
CCDC113-206ENST00000616795 DNAJC5BQ9UF47 199 aa27.22■■□□□ 1.95
CCDC113-206ENST00000616795 SHROOM4Q9ULL8 1493 aa27.06■■□□□ 1.92
CCDC113-206ENST00000616795 EIF4G1Q04637 1599 aaKnown RBP26.72■■□□□ 1.87
CCDC113-206ENST00000616795 CC2D2AQ9P2K1 1620 aa26.67■■□□□ 1.86
CCDC113-206ENST00000616795 CECR2Q9BXF3 1484 aa26.48■■□□□ 1.83
CCDC113-206ENST00000616795 SMARCA4P51532 1647 aa26.12■■□□□ 1.77
CCDC113-206ENST00000616795 BAZ1AQ9NRL2 1556 aaPredicted RBP26.03■■□□□ 1.76
CCDC113-206ENST00000616795 ATAD2BQ9ULI0 1458 aa25.99■■□□□ 1.75
CCDC113-206ENST00000616795 NCAPD3P42695 1498 aa25.98■■□□□ 1.75
CCDC113-206ENST00000616795 SMARCA2P51531 1590 aa25.93■■□□□ 1.74
CCDC113-206ENST00000616795 MROH2BQ7Z745 1585 aa25.9■■□□□ 1.74
CCDC113-206ENST00000616795 HMGXB3Q12766 1538 aa25.86■■□□□ 1.73
CCDC113-206ENST00000616795 PEG3Q9GZU2 1588 aa25.85■■□□□ 1.73
CCDC113-206ENST00000616795 BAZ1BQ9UIG0 1483 aaKnown RBP25.76■■□□□ 1.71
CCDC113-206ENST00000616795 WIZO95785 1651 aa25.64■■□□□ 1.69
CCDC113-206ENST00000616795 RSF1Q96T23 1441 aaPredicted RBP25.51■■□□□ 1.67
CCDC113-206ENST00000616795 NESP48681 1621 aa25.47■■□□□ 1.67
CCDC113-206ENST00000616795 ERCC6Q03468 1493 aa25.37■■□□□ 1.65
CCDC113-206ENST00000616795 LAMC3Q9Y6N6 1575 aa25.35■■□□□ 1.65
CCDC113-206ENST00000616795 TOP2AP11388 1531 aaKnown RBP25.32■■□□□ 1.64
CCDC113-206ENST00000616795 CADPSQ9ULU8 1353 aa25.2■■□□□ 1.63
CCDC113-206ENST00000616795 KIF21AQ7Z4S6 1674 aa25.2■■□□□ 1.63
CCDC113-206ENST00000616795 CUX2O14529 1486 aa25.17■■□□□ 1.62
CCDC113-206ENST00000616795 THOC2Q8NI27 1593 aaKnown RBP25.14■■□□□ 1.62
CCDC113-206ENST00000616795 PDS5BQ9NTI5 1447 aa25.13■■□□□ 1.61
CCDC113-206ENST00000616795 CFTRP13569 1480 aa25.04■■□□□ 1.6
CCDC113-206ENST00000616795 CCDC88BA6NC98 1476 aa25.02■■□□□ 1.6
CCDC113-206ENST00000616795 FANCD2Q9BXW9 1451 aa24.94■■□□□ 1.58
CCDC113-206ENST00000616795 MRC2Q9UBG0 1479 aa24.93■■□□□ 1.58
CCDC113-206ENST00000616795 PRDM2Q13029 1718 aa24.92■■□□□ 1.58
CCDC113-206ENST00000616795 CEP164Q9UPV0 1460 aa24.92■■□□□ 1.58
CCDC113-206ENST00000616795 WDR62O43379 1518 aa24.87■■□□□ 1.57
CCDC113-206ENST00000616795 URB2Q14146 1524 aaKnown RBP24.74■■□□□ 1.55
CCDC113-206ENST00000616795 SUPT5HO00267 1087 aaKnown RBP24.69■■□□□ 1.54
CCDC113-206ENST00000616795 DNAJC5Q9H3Z4 198 aa24.59■■□□□ 1.53
CCDC113-206ENST00000616795 TOPBP1Q92547 1522 aa24.54■■□□□ 1.52
CCDC113-206ENST00000616795 DNMBPQ6XZF7 1577 aa24.5■■□□□ 1.51
CCDC113-206ENST00000616795 ABCC8Q09428 1581 aa24.46■■□□□ 1.51
CCDC113-206ENST00000616795 IFT140Q96RY7 1462 aa24.39■■□□□ 1.5
CCDC113-206ENST00000616795 ZNF608Q9ULD9 1512 aaPredicted RBP24.35■■□□□ 1.49
CCDC113-206ENST00000616795 POLA1P09884 1462 aaPredicted RBP24.32■■□□□ 1.48
CCDC113-206ENST00000616795 TARBP1Q13395 1621 aaKnown RBP24.32■■□□□ 1.48
CCDC113-206ENST00000616795 CUX1P39880 1505 aa24.31■■□□□ 1.48
CCDC113-206ENST00000616795 EIF4G3O43432 1585 aaKnown RBP24.26■■□□□ 1.47
CCDC113-206ENST00000616795 FGD5Q6ZNL6 1462 aa24.24■■□□□ 1.47
CCDC113-206ENST00000616795 RAD54L2Q9Y4B4 1467 aa24.23■■□□□ 1.47
CCDC113-206ENST00000616795 SOGA1O94964 1423 aa24.18■■□□□ 1.46
CCDC113-206ENST00000616795 AQRO60306 1485 aaKnown RBP eCLIP24.17■■□□□ 1.46
CCDC113-206ENST00000616795 WDR97A6NE52 1622 aa24.1■■□□□ 1.45
CCDC113-206ENST00000616795 TDRD9Q8NDG6 1382 aaKnown RBP24.08■■□□□ 1.45
CCDC113-206ENST00000616795 BIVM-ERCC5R4GMW8 1640 aa24.06■■□□□ 1.44
CCDC113-206ENST00000616795 SYNJ1O43426 1573 aa24.06■■□□□ 1.44
CCDC113-206ENST00000616795 OSCARQ8IYS5 282 aa24.05■■□□□ 1.44
CCDC113-206ENST00000616795 WRNQ14191 1432 aaPredicted RBP eCLIP24.04■■□□□ 1.44
CCDC113-206ENST00000616795 TOP2BQ02880 1626 aa24.04■■□□□ 1.44
CCDC113-206ENST00000616795 CHD1O14646 1710 aa24.02■■□□□ 1.44
CCDC113-206ENST00000616795 ABCA10Q8WWZ4 1543 aa23.98■■□□□ 1.43
CCDC113-206ENST00000616795 SNAPC4Q5SXM2 1469 aa23.95■■□□□ 1.42
CCDC113-206ENST00000616795 PBRM1Q86U86 1689 aa23.95■■□□□ 1.42
CCDC113-206ENST00000616795 ABCA5Q8WWZ7 1642 aa23.94■■□□□ 1.42
CCDC113-206ENST00000616795 GRIN2BQ13224 1484 aa23.93■■□□□ 1.42
CCDC113-206ENST00000616795 GAPVD1Q14C86 1478 aa23.91■■□□□ 1.42
CCDC113-206ENST00000616795 MAGI1Q96QZ7 1491 aaPredicted RBP23.88■■□□□ 1.41
CCDC113-206ENST00000616795 FBLN2P98095 1184 aa23.86■■□□□ 1.41
CCDC113-206ENST00000616795 RIMBP3CA6NJZ7 1639 aa23.79■■□□□ 1.4
CCDC113-206ENST00000616795 RIMBP3BA6NNM3 1639 aa23.79■■□□□ 1.4
CCDC113-206ENST00000616795 RIMBP3Q9UFD9 1639 aa23.79■■□□□ 1.4
CCDC113-206ENST00000616795 SYNJ2O15056 1496 aa23.79■■□□□ 1.4
CCDC113-206ENST00000616795 CHMP7Q8WUX9 453 aaPredicted RBP23.75■■□□□ 1.39
CCDC113-206ENST00000616795 ARHGEF11O15085 1522 aa23.74■■□□□ 1.39
CCDC113-206ENST00000616795 ADAMTS12P58397 1594 aa23.73■■□□□ 1.39
CCDC113-206ENST00000616795 TRIM41Q8WV44 630 aa23.72■■□□□ 1.39
CCDC113-206ENST00000616795 CLASP1Q7Z460 1538 aa23.72■■□□□ 1.39
CCDC113-206ENST00000616795 ERICH3Q5RHP9 1530 aa23.69■■□□□ 1.38
CCDC113-206ENST00000616795 GRIN2AQ12879 1464 aa23.63■■□□□ 1.37
CCDC113-206ENST00000616795 FHAD1B1AJZ9 1412 aa23.61■■□□□ 1.37
CCDC113-206ENST00000616795 CEP170Q5SW79 1584 aa23.57■■□□□ 1.36
CCDC113-206ENST00000616795 ARAP1Q96P48 1450 aa23.56■■□□□ 1.36
CCDC113-206ENST00000616795 NUP160Q12769 1436 aa23.54■■□□□ 1.36
CCDC113-206ENST00000616795 KIF27Q86VH2 1401 aa23.52■■□□□ 1.36
CCDC113-206ENST00000616795 IGF1RP08069 1367 aa23.48■■□□□ 1.35
CCDC113-206ENST00000616795 CYB5RLQ6IPT4 315 aa23.47■■□□□ 1.35
CCDC113-206ENST00000616795 CUL7Q14999 1698 aa23.45■■□□□ 1.34
CCDC113-206ENST00000616795 SHROOM2Q13796 1616 aa23.42■■□□□ 1.34
CCDC113-206ENST00000616795 ERCC6L2Q5T890 1561 aa23.41■■□□□ 1.34
CCDC113-206ENST00000616795 RUSC2Q8N2Y8 1516 aa23.38■■□□□ 1.33
CCDC113-206ENST00000616795 CARMIL1Q5VZK9 1371 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms