RNA–Protein interactions for RNA: ENST00000604404.5

FXYD3-208, Transcript of FXYD domain containing ion transport regulator 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXYD3, Length 1,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXYD3-208ENST00000604404 NISCHQ9Y2I1 1504 aa33.74■■■□□ 2.99
FXYD3-208ENST00000604404 CCDC180Q9P1Z9 1646 aa29.87■■■□□ 2.37
FXYD3-208ENST00000604404 ABCC9O60706 1549 aa29.16■■■□□ 2.26
FXYD3-208ENST00000604404 ZCCHC6Q5VYS8 1495 aaKnown RBP28.13■■■□□ 2.09
FXYD3-208ENST00000604404 NACADO15069 1562 aa28.11■■■□□ 2.09
FXYD3-208ENST00000604404 RB1CC1Q8TDY2 1594 aa28.07■■■□□ 2.08
FXYD3-208ENST00000604404 MYO15BQ96JP2 1530 aa28.06■■■□□ 2.08
FXYD3-208ENST00000604404 DCAF8L2P0C7V8 631 aa28■■■□□ 2.07
FXYD3-208ENST00000604404 DCAF1Q9Y4B6 1507 aa27.96■■■□□ 2.07
FXYD3-208ENST00000604404 UNC13AQ9UPW8 1703 aa27.39■■□□□ 1.98
FXYD3-208ENST00000604404 BICRAQ9NZM4 1560 aa27.33■■□□□ 1.97
FXYD3-208ENST00000604404 PABPN1Q86U42 306 aaKnown RBP eCLIP27.3■■□□□ 1.96
FXYD3-208ENST00000604404 SCRIBQ14160 1630 aa27.23■■□□□ 1.95
FXYD3-208ENST00000604404 SHROOM4Q9ULL8 1493 aa27.03■■□□□ 1.92
FXYD3-208ENST00000604404 DNAJC5BQ9UF47 199 aa26.84■■□□□ 1.89
FXYD3-208ENST00000604404 EIF4G1Q04637 1599 aaKnown RBP26.54■■□□□ 1.84
FXYD3-208ENST00000604404 CC2D2AQ9P2K1 1620 aa26.38■■□□□ 1.81
FXYD3-208ENST00000604404 CECR2Q9BXF3 1484 aa26.29■■□□□ 1.8
FXYD3-208ENST00000604404 SMARCA4P51532 1647 aa26.11■■□□□ 1.77
FXYD3-208ENST00000604404 BAZ1AQ9NRL2 1556 aaPredicted RBP26.1■■□□□ 1.77
FXYD3-208ENST00000604404 NCAPD3P42695 1498 aa26.01■■□□□ 1.75
FXYD3-208ENST00000604404 ATAD2BQ9ULI0 1458 aa26.01■■□□□ 1.75
FXYD3-208ENST00000604404 MROH2BQ7Z745 1585 aa26■■□□□ 1.75
FXYD3-208ENST00000604404 PEG3Q9GZU2 1588 aa25.93■■□□□ 1.74
FXYD3-208ENST00000604404 SMARCA2P51531 1590 aa25.92■■□□□ 1.74
FXYD3-208ENST00000604404 HMGXB3Q12766 1538 aa25.83■■□□□ 1.73
FXYD3-208ENST00000604404 RSF1Q96T23 1441 aaPredicted RBP25.77■■□□□ 1.72
FXYD3-208ENST00000604404 BAZ1BQ9UIG0 1483 aaKnown RBP25.73■■□□□ 1.71
FXYD3-208ENST00000604404 WIZO95785 1651 aa25.65■■□□□ 1.7
FXYD3-208ENST00000604404 TOP2AP11388 1531 aaKnown RBP25.41■■□□□ 1.66
FXYD3-208ENST00000604404 NESP48681 1621 aa25.3■■□□□ 1.64
FXYD3-208ENST00000604404 CADPSQ9ULU8 1353 aa25.23■■□□□ 1.63
FXYD3-208ENST00000604404 LAMC3Q9Y6N6 1575 aa25.22■■□□□ 1.63
FXYD3-208ENST00000604404 CCDC88BA6NC98 1476 aa25.16■■□□□ 1.62
FXYD3-208ENST00000604404 SUPT5HO00267 1087 aaKnown RBP25.12■■□□□ 1.61
FXYD3-208ENST00000604404 CFTRP13569 1480 aa25.11■■□□□ 1.61
FXYD3-208ENST00000604404 ERCC6Q03468 1493 aa25.07■■□□□ 1.6
FXYD3-208ENST00000604404 PDS5BQ9NTI5 1447 aa25.06■■□□□ 1.6
FXYD3-208ENST00000604404 KIF21AQ7Z4S6 1674 aa24.91■■□□□ 1.58
FXYD3-208ENST00000604404 FANCD2Q9BXW9 1451 aa24.9■■□□□ 1.58
FXYD3-208ENST00000604404 THOC2Q8NI27 1593 aaKnown RBP24.88■■□□□ 1.57
FXYD3-208ENST00000604404 CUX2O14529 1486 aa24.86■■□□□ 1.57
FXYD3-208ENST00000604404 CEP164Q9UPV0 1460 aa24.82■■□□□ 1.56
FXYD3-208ENST00000604404 MRC2Q9UBG0 1479 aa24.8■■□□□ 1.56
FXYD3-208ENST00000604404 WDR62O43379 1518 aa24.73■■□□□ 1.55
FXYD3-208ENST00000604404 PRDM2Q13029 1718 aa24.73■■□□□ 1.55
FXYD3-208ENST00000604404 URB2Q14146 1524 aaKnown RBP24.67■■□□□ 1.54
FXYD3-208ENST00000604404 TOPBP1Q92547 1522 aa24.51■■□□□ 1.51
FXYD3-208ENST00000604404 ABCC8Q09428 1581 aa24.49■■□□□ 1.51
FXYD3-208ENST00000604404 DNMBPQ6XZF7 1577 aa24.47■■□□□ 1.51
FXYD3-208ENST00000604404 CUX1P39880 1505 aa24.38■■□□□ 1.49
FXYD3-208ENST00000604404 IFT140Q96RY7 1462 aa24.34■■□□□ 1.49
FXYD3-208ENST00000604404 POLA1P09884 1462 aaPredicted RBP24.33■■□□□ 1.49
FXYD3-208ENST00000604404 TARBP1Q13395 1621 aaKnown RBP24.26■■□□□ 1.47
FXYD3-208ENST00000604404 FGD5Q6ZNL6 1462 aa24.25■■□□□ 1.47
FXYD3-208ENST00000604404 ZNF608Q9ULD9 1512 aaPredicted RBP24.24■■□□□ 1.47
FXYD3-208ENST00000604404 WRNQ14191 1432 aaPredicted RBP eCLIP24.23■■□□□ 1.47
FXYD3-208ENST00000604404 RAD54L2Q9Y4B4 1467 aa24.21■■□□□ 1.47
FXYD3-208ENST00000604404 SOGA1O94964 1423 aa24.21■■□□□ 1.47
FXYD3-208ENST00000604404 SYNJ1O43426 1573 aa24.16■■□□□ 1.46
FXYD3-208ENST00000604404 TOP2BQ02880 1626 aa24.16■■□□□ 1.46
FXYD3-208ENST00000604404 BIVM-ERCC5R4GMW8 1640 aa24.14■■□□□ 1.45
FXYD3-208ENST00000604404 AQRO60306 1485 aaKnown RBP eCLIP24.11■■□□□ 1.45
FXYD3-208ENST00000604404 EIF4G3O43432 1585 aaKnown RBP24.08■■□□□ 1.45
FXYD3-208ENST00000604404 TDRD9Q8NDG6 1382 aaKnown RBP24.07■■□□□ 1.44
FXYD3-208ENST00000604404 DNAJC5Q9H3Z4 198 aa24.07■■□□□ 1.44
FXYD3-208ENST00000604404 ABCA10Q8WWZ4 1543 aa24.06■■□□□ 1.44
FXYD3-208ENST00000604404 WDR97A6NE52 1622 aa24.03■■□□□ 1.44
FXYD3-208ENST00000604404 GAPVD1Q14C86 1478 aa23.92■■□□□ 1.42
FXYD3-208ENST00000604404 ABCA5Q8WWZ7 1642 aa23.92■■□□□ 1.42
FXYD3-208ENST00000604404 GRIN2BQ13224 1484 aa23.91■■□□□ 1.42
FXYD3-208ENST00000604404 CHIC1Q5VXU3 224 aa23.89■■□□□ 1.42
FXYD3-208ENST00000604404 SNAPC4Q5SXM2 1469 aa23.85■■□□□ 1.41
FXYD3-208ENST00000604404 OSCARQ8IYS5 282 aa23.84■■□□□ 1.41
FXYD3-208ENST00000604404 MAGI1Q96QZ7 1491 aaPredicted RBP23.84■■□□□ 1.41
FXYD3-208ENST00000604404 PBRM1Q86U86 1689 aa23.76■■□□□ 1.39
FXYD3-208ENST00000604404 TRIM41Q8WV44 630 aa23.76■■□□□ 1.39
FXYD3-208ENST00000604404 SYNJ2O15056 1496 aa23.76■■□□□ 1.39
FXYD3-208ENST00000604404 ERICH3Q5RHP9 1530 aa23.75■■□□□ 1.39
FXYD3-208ENST00000604404 KIF27Q86VH2 1401 aa23.7■■□□□ 1.38
FXYD3-208ENST00000604404 CHD1O14646 1710 aa23.7■■□□□ 1.38
FXYD3-208ENST00000604404 FBLN2P98095 1184 aa23.69■■□□□ 1.38
FXYD3-208ENST00000604404 CHMP7Q8WUX9 453 aaPredicted RBP23.69■■□□□ 1.38
FXYD3-208ENST00000604404 IGF1RP08069 1367 aa23.69■■□□□ 1.38
FXYD3-208ENST00000604404 FHAD1B1AJZ9 1412 aa23.67■■□□□ 1.38
FXYD3-208ENST00000604404 ADAMTS12P58397 1594 aa23.67■■□□□ 1.38
FXYD3-208ENST00000604404 GRIN2AQ12879 1464 aa23.61■■□□□ 1.37
FXYD3-208ENST00000604404 CLASP1Q7Z460 1538 aa23.57■■□□□ 1.36
FXYD3-208ENST00000604404 NUP160Q12769 1436 aa23.56■■□□□ 1.36
FXYD3-208ENST00000604404 RUSC2Q8N2Y8 1516 aa23.56■■□□□ 1.36
FXYD3-208ENST00000604404 AEBP2Q6ZN18 517 aaPredicted RBP23.53■■□□□ 1.36
FXYD3-208ENST00000604404 CARMIL1Q5VZK9 1371 aa23.48■■□□□ 1.35
FXYD3-208ENST00000604404 CEP170Q5SW79 1584 aa23.48■■□□□ 1.35
FXYD3-208ENST00000604404 CUL7Q14999 1698 aa23.48■■□□□ 1.35
FXYD3-208ENST00000604404 ARHGEF11O15085 1522 aa23.45■■□□□ 1.34
FXYD3-208ENST00000604404 EEA1Q15075 1411 aa23.41■■□□□ 1.34
FXYD3-208ENST00000604404 RIMBP3CA6NJZ7 1639 aa23.41■■□□□ 1.34
FXYD3-208ENST00000604404 RIMBP3BA6NNM3 1639 aa23.41■■□□□ 1.34
FXYD3-208ENST00000604404 RIMBP3Q9UFD9 1639 aa23.41■■□□□ 1.34
FXYD3-208ENST00000604404 PRXQ9BXM0 1461 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms