RNA–Protein interactions for RNA: ENST00000637511.1

NRXN1-259, Transcript of neurexin 1, humanhuman

TSL 5 BASIC

Gene NRXN1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-259ENST00000637511 NISCHQ9Y2I1 1504 aa27.82■■■□□ 2.04
NRXN1-259ENST00000637511 CCDC180Q9P1Z9 1646 aa23.81■■□□□ 1.4
NRXN1-259ENST00000637511 ZCCHC6Q5VYS8 1495 aaKnown RBP23.43■■□□□ 1.34
NRXN1-259ENST00000637511 SHROOM4Q9ULL8 1493 aa23.42■■□□□ 1.34
NRXN1-259ENST00000637511 DCAF8L2P0C7V8 631 aa23.18■■□□□ 1.3
NRXN1-259ENST00000637511 DCAF1Q9Y4B6 1507 aa22.74■■□□□ 1.23
NRXN1-259ENST00000637511 SUPT5HO00267 1087 aaKnown RBP22.64■■□□□ 1.21
NRXN1-259ENST00000637511 ABCC9O60706 1549 aa22.63■■□□□ 1.21
NRXN1-259ENST00000637511 SCRIBQ14160 1630 aa22.35■■□□□ 1.17
NRXN1-259ENST00000637511 MYO15BQ96JP2 1530 aa22.25■■□□□ 1.15
NRXN1-259ENST00000637511 NACADO15069 1562 aa22.12■■□□□ 1.13
NRXN1-259ENST00000637511 PELP1Q8IZL8 1130 aaKnown RBP21.94■■□□□ 1.1
NRXN1-259ENST00000637511 RB1CC1Q8TDY2 1594 aa21.87■■□□□ 1.09
NRXN1-259ENST00000637511 CECR2Q9BXF3 1484 aa21.86■■□□□ 1.09
NRXN1-259ENST00000637511 RSF1Q96T23 1441 aaPredicted RBP21.85■■□□□ 1.09
NRXN1-259ENST00000637511 CHIC1Q5VXU3 224 aa21.77■■□□□ 1.08
NRXN1-259ENST00000637511 UNC13AQ9UPW8 1703 aa21.77■■□□□ 1.07
NRXN1-259ENST00000637511 MROH2BQ7Z745 1585 aa21.68■■□□□ 1.06
NRXN1-259ENST00000637511 PPARGC1BQ86YN6 1023 aaKnown RBP21.61■■□□□ 1.05
NRXN1-259ENST00000637511 PABPN1Q86U42 306 aaKnown RBP eCLIP21.58■■□□□ 1.04
NRXN1-259ENST00000637511 WIZO95785 1651 aa21.55■■□□□ 1.04
NRXN1-259ENST00000637511 BICRAQ9NZM4 1560 aa21.5■■□□□ 1.03
NRXN1-259ENST00000637511 BAZ1AQ9NRL2 1556 aaPredicted RBP21.33■■□□□ 1
NRXN1-259ENST00000637511 HRCP23327 699 aa21.3■■□□□ 1
NRXN1-259ENST00000637511 SMARCA4P51532 1647 aa21.3■■□□□ 1
NRXN1-259ENST00000637511 MYT1Q01538 1121 aa21.28■■□□□ 1
NRXN1-259ENST00000637511 PCGF6Q9BYE7 350 aa21.21■□□□□ 0.99
NRXN1-259ENST00000637511 LOC105371045A0A1W2PR82 267 aa21.21■□□□□ 0.99
NRXN1-259ENST00000637511 TOP2AP11388 1531 aaKnown RBP21.08■□□□□ 0.96
NRXN1-259ENST00000637511 CCDC88BA6NC98 1476 aa21.05■□□□□ 0.96
NRXN1-259ENST00000637511 EIF4G1Q04637 1599 aaKnown RBP21.04■□□□□ 0.96
NRXN1-259ENST00000637511 TRIM41Q8WV44 630 aa21.03■□□□□ 0.96
NRXN1-259ENST00000637511 SMARCA2P51531 1590 aa21.02■□□□□ 0.96
NRXN1-259ENST00000637511 FAM9AQ8IZU1 332 aaPredicted RBP20.96■□□□□ 0.95
NRXN1-259ENST00000637511 SCAF1Q9H7N4 1312 aaKnown RBP20.95■□□□□ 0.94
NRXN1-259ENST00000637511 PEG3Q9GZU2 1588 aa20.9■□□□□ 0.94
NRXN1-259ENST00000637511 ABCC8Q09428 1581 aa20.89■□□□□ 0.93
NRXN1-259ENST00000637511 ATAD2BQ9ULI0 1458 aa20.88■□□□□ 0.93
NRXN1-259ENST00000637511 EHMT2Q96KQ7 1210 aa20.87■□□□□ 0.93
NRXN1-259ENST00000637511 BAZ1BQ9UIG0 1483 aaKnown RBP20.73■□□□□ 0.91
NRXN1-259ENST00000637511 SOGA1O94964 1423 aa20.57■□□□□ 0.88
NRXN1-259ENST00000637511 RUSC2Q8N2Y8 1516 aa20.57■□□□□ 0.88
NRXN1-259ENST00000637511 NCAPD3P42695 1498 aa20.53■□□□□ 0.88
NRXN1-259ENST00000637511 SYNJ1O43426 1573 aa20.5■□□□□ 0.87
NRXN1-259ENST00000637511 WRNQ14191 1432 aaPredicted RBP eCLIP20.45■□□□□ 0.86
NRXN1-259ENST00000637511 HMGXB3Q12766 1538 aa20.45■□□□□ 0.86
NRXN1-259ENST00000637511 GTF3C3Q9Y5Q9 886 aa20.39■□□□□ 0.86
NRXN1-259ENST00000637511 BCL11AQ9H165 835 aa20.38■□□□□ 0.85
NRXN1-259ENST00000637511 CC2D2AQ9P2K1 1620 aa20.38■□□□□ 0.85
NRXN1-259ENST00000637511 DNAJC5BQ9UF47 199 aa20.3■□□□□ 0.84
NRXN1-259ENST00000637511 CSRNP3Q8WYN3 585 aa20.25■□□□□ 0.83
NRXN1-259ENST00000637511 PRKCSHP14314 528 aaPredicted RBP20.25■□□□□ 0.83
NRXN1-259ENST00000637511 CFTRP13569 1480 aa20.24■□□□□ 0.83
NRXN1-259ENST00000637511 TOP2BQ02880 1626 aa20.2■□□□□ 0.82
NRXN1-259ENST00000637511 CUX1P39880 1505 aa20.2■□□□□ 0.82
NRXN1-259ENST00000637511 NEUROD1Q13562 356 aa20.17■□□□□ 0.82
NRXN1-259ENST00000637511 YTHDC1Q96MU7 727 aaKnown RBP20.16■□□□□ 0.82
NRXN1-259ENST00000637511 BIVM-ERCC5R4GMW8 1640 aa20.14■□□□□ 0.81
NRXN1-259ENST00000637511 TRIM26Q12899 539 aaPredicted RBP20.14■□□□□ 0.81
NRXN1-259ENST00000637511 CENPBP07199 599 aaPredicted RBP20.12■□□□□ 0.81
NRXN1-259ENST00000637511 CEP162Q5TB80 1403 aa20.11■□□□□ 0.81
NRXN1-259ENST00000637511 UBTFP17480 764 aaKnown RBP20.09■□□□□ 0.81
NRXN1-259ENST00000637511 NESP48681 1621 aa20.09■□□□□ 0.81
NRXN1-259ENST00000637511 CADPSQ9ULU8 1353 aa20.09■□□□□ 0.81
NRXN1-259ENST00000637511 EEA1Q15075 1411 aa20.08■□□□□ 0.81
NRXN1-259ENST00000637511 ACIN1Q9UKV3 1341 aaKnown RBP20.07■□□□□ 0.8
NRXN1-259ENST00000637511 RAPGEF2Q9Y4G8 1499 aa20.07■□□□□ 0.8
NRXN1-259ENST00000637511 TNIKQ9UKE5 1360 aa20.06■□□□□ 0.8
NRXN1-259ENST00000637511 GOLGA3Q08378 1498 aa20.02■□□□□ 0.8
NRXN1-259ENST00000637511 TTBK1Q5TCY1 1321 aaPredicted RBP20.02■□□□□ 0.8
NRXN1-259ENST00000637511 PRDM2Q13029 1718 aa20.01■□□□□ 0.79
NRXN1-259ENST00000637511 KIF21BO75037 1637 aa19.98■□□□□ 0.79
NRXN1-259ENST00000637511 RANGAP1P46060 587 aaPredicted RBP19.97■□□□□ 0.79
NRXN1-259ENST00000637511 CEP164Q9UPV0 1460 aa19.96■□□□□ 0.79
NRXN1-259ENST00000637511 FANCD2Q9BXW9 1451 aa19.91■□□□□ 0.78
NRXN1-259ENST00000637511 PRXQ9BXM0 1461 aa19.88■□□□□ 0.77
NRXN1-259ENST00000637511 FGD5Q6ZNL6 1462 aa19.87■□□□□ 0.77
NRXN1-259ENST00000637511 CUX2O14529 1486 aa19.81■□□□□ 0.76
NRXN1-259ENST00000637511 RAD54L2Q9Y4B4 1467 aa19.81■□□□□ 0.76
NRXN1-259ENST00000637511 CLIP1P30622 1438 aa19.81■□□□□ 0.76
NRXN1-259ENST00000637511 KIF27Q86VH2 1401 aa19.8■□□□□ 0.76
NRXN1-259ENST00000637511 IGF1RP08069 1367 aa19.78■□□□□ 0.76
NRXN1-259ENST00000637511 TOPBP1Q92547 1522 aa19.75■□□□□ 0.75
NRXN1-259ENST00000637511 URB2Q14146 1524 aaKnown RBP19.74■□□□□ 0.75
NRXN1-259ENST00000637511 POLA1P09884 1462 aaPredicted RBP19.73■□□□□ 0.75
NRXN1-259ENST00000637511 ERICH3Q5RHP9 1530 aa19.72■□□□□ 0.75
NRXN1-259ENST00000637511 DNMBPQ6XZF7 1577 aa19.69■□□□□ 0.74
NRXN1-259ENST00000637511 LAMC3Q9Y6N6 1575 aa19.69■□□□□ 0.74
NRXN1-259ENST00000637511 KIF21AQ7Z4S6 1674 aa19.69■□□□□ 0.74
NRXN1-259ENST00000637511 ARAP1Q96P48 1450 aa19.66■□□□□ 0.74
NRXN1-259ENST00000637511 VPS8Q8N3P4 1428 aa19.65■□□□□ 0.74
NRXN1-259ENST00000637511 ZEB1P37275 1124 aaPredicted RBP19.62■□□□□ 0.73
NRXN1-259ENST00000637511 ERICH6Q7L0X2 663 aa19.62■□□□□ 0.73
NRXN1-259ENST00000637511 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.61■□□□□ 0.73
NRXN1-259ENST00000637511 CARMIL1Q5VZK9 1371 aa19.6■□□□□ 0.73
NRXN1-259ENST00000637511 ABCA10Q8WWZ4 1543 aa19.59■□□□□ 0.73
NRXN1-259ENST00000637511 ARHGAP35Q9NRY4 1499 aa19.58■□□□□ 0.72
NRXN1-259ENST00000637511 TDRD9Q8NDG6 1382 aaKnown RBP19.57■□□□□ 0.72
NRXN1-259ENST00000637511 KANK4Q5T7N3 995 aaPredicted RBP19.54■□□□□ 0.72
NRXN1-259ENST00000637511 PDS5BQ9NTI5 1447 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms