RNA–Protein interactions for RNA: ENST00000448301.6

CTSS-202, Transcript of cathepsin S, humanhuman

TSL 2 BASIC

Gene CTSS, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-202ENST00000448301 NISCHQ9Y2I1 1504 aa33.57■■■□□ 2.97
CTSS-202ENST00000448301 CCDC180Q9P1Z9 1646 aa29.79■■■□□ 2.36
CTSS-202ENST00000448301 ABCC9O60706 1549 aa28.66■■■□□ 2.18
CTSS-202ENST00000448301 ZCCHC6Q5VYS8 1495 aaKnown RBP28.07■■■□□ 2.08
CTSS-202ENST00000448301 AEBP2Q6ZN18 517 aaPredicted RBP27.89■■■□□ 2.06
CTSS-202ENST00000448301 NACADO15069 1562 aa27.86■■■□□ 2.05
CTSS-202ENST00000448301 DCAF1Q9Y4B6 1507 aa27.84■■■□□ 2.05
CTSS-202ENST00000448301 MYO15BQ96JP2 1530 aa27.82■■■□□ 2.04
CTSS-202ENST00000448301 RB1CC1Q8TDY2 1594 aa27.8■■■□□ 2.04
CTSS-202ENST00000448301 DCAF8L2P0C7V8 631 aa27.75■■■□□ 2.03
CTSS-202ENST00000448301 UNC13AQ9UPW8 1703 aa27.25■■□□□ 1.95
CTSS-202ENST00000448301 SCRIBQ14160 1630 aa27.13■■□□□ 1.93
CTSS-202ENST00000448301 BICRAQ9NZM4 1560 aa26.94■■□□□ 1.9
CTSS-202ENST00000448301 PABPN1Q86U42 306 aaKnown RBP eCLIP26.77■■□□□ 1.88
CTSS-202ENST00000448301 SHROOM4Q9ULL8 1493 aa26.72■■□□□ 1.87
CTSS-202ENST00000448301 CHIC1Q5VXU3 224 aa26.28■■□□□ 1.8
CTSS-202ENST00000448301 EIF4G1Q04637 1599 aaKnown RBP26.2■■□□□ 1.78
CTSS-202ENST00000448301 CECR2Q9BXF3 1484 aa26.07■■□□□ 1.76
CTSS-202ENST00000448301 BAZ1AQ9NRL2 1556 aaPredicted RBP26.02■■□□□ 1.76
CTSS-202ENST00000448301 SMARCA4P51532 1647 aa26.01■■□□□ 1.75
CTSS-202ENST00000448301 CC2D2AQ9P2K1 1620 aa26■■□□□ 1.75
CTSS-202ENST00000448301 DNAJC5BQ9UF47 199 aa25.9■■□□□ 1.74
CTSS-202ENST00000448301 MROH2BQ7Z745 1585 aa25.87■■□□□ 1.73
CTSS-202ENST00000448301 PEG3Q9GZU2 1588 aa25.77■■□□□ 1.72
CTSS-202ENST00000448301 SMARCA2P51531 1590 aa25.75■■□□□ 1.71
CTSS-202ENST00000448301 ATAD2BQ9ULI0 1458 aa25.72■■□□□ 1.71
CTSS-202ENST00000448301 RSF1Q96T23 1441 aaPredicted RBP25.68■■□□□ 1.7
CTSS-202ENST00000448301 NCAPD3P42695 1498 aa25.66■■□□□ 1.7
CTSS-202ENST00000448301 WIZO95785 1651 aa25.64■■□□□ 1.7
CTSS-202ENST00000448301 HMGXB3Q12766 1538 aa25.62■■□□□ 1.69
CTSS-202ENST00000448301 BAZ1BQ9UIG0 1483 aaKnown RBP25.54■■□□□ 1.68
CTSS-202ENST00000448301 TOP2AP11388 1531 aaKnown RBP25.4■■□□□ 1.66
CTSS-202ENST00000448301 SUPT5HO00267 1087 aaKnown RBP25.21■■□□□ 1.63
CTSS-202ENST00000448301 CCDC88BA6NC98 1476 aa25.04■■□□□ 1.6
CTSS-202ENST00000448301 LAMC3Q9Y6N6 1575 aa24.97■■□□□ 1.59
CTSS-202ENST00000448301 NESP48681 1621 aa24.91■■□□□ 1.58
CTSS-202ENST00000448301 CADPSQ9ULU8 1353 aa24.91■■□□□ 1.58
CTSS-202ENST00000448301 CFTRP13569 1480 aa24.87■■□□□ 1.57
CTSS-202ENST00000448301 PRDM2Q13029 1718 aa24.85■■□□□ 1.57
CTSS-202ENST00000448301 PDS5BQ9NTI5 1447 aa24.73■■□□□ 1.55
CTSS-202ENST00000448301 KIF21AQ7Z4S6 1674 aa24.72■■□□□ 1.55
CTSS-202ENST00000448301 ERCC6Q03468 1493 aa24.67■■□□□ 1.54
CTSS-202ENST00000448301 FANCD2Q9BXW9 1451 aa24.63■■□□□ 1.53
CTSS-202ENST00000448301 CEP164Q9UPV0 1460 aa24.59■■□□□ 1.53
CTSS-202ENST00000448301 THOC2Q8NI27 1593 aaKnown RBP24.54■■□□□ 1.52
CTSS-202ENST00000448301 MRC2Q9UBG0 1479 aa24.48■■□□□ 1.51
CTSS-202ENST00000448301 WDR62O43379 1518 aa24.42■■□□□ 1.5
CTSS-202ENST00000448301 URB2Q14146 1524 aaKnown RBP24.38■■□□□ 1.49
CTSS-202ENST00000448301 ABCC8Q09428 1581 aa24.34■■□□□ 1.49
CTSS-202ENST00000448301 DNMBPQ6XZF7 1577 aa24.34■■□□□ 1.49
CTSS-202ENST00000448301 CUX2O14529 1486 aa24.32■■□□□ 1.48
CTSS-202ENST00000448301 TOPBP1Q92547 1522 aa24.3■■□□□ 1.48
CTSS-202ENST00000448301 CUX1P39880 1505 aa24.25■■□□□ 1.47
CTSS-202ENST00000448301 WRNQ14191 1432 aaPredicted RBP eCLIP24.21■■□□□ 1.47
CTSS-202ENST00000448301 BIVM-ERCC5R4GMW8 1640 aa24.21■■□□□ 1.47
CTSS-202ENST00000448301 TOP2BQ02880 1626 aa24.18■■□□□ 1.46
CTSS-202ENST00000448301 SYNJ1O43426 1573 aa24.17■■□□□ 1.46
CTSS-202ENST00000448301 POLA1P09884 1462 aaPredicted RBP24.12■■□□□ 1.45
CTSS-202ENST00000448301 FGD5Q6ZNL6 1462 aa24.11■■□□□ 1.45
CTSS-202ENST00000448301 IFT140Q96RY7 1462 aa24.05■■□□□ 1.44
CTSS-202ENST00000448301 TARBP1Q13395 1621 aaKnown RBP24.04■■□□□ 1.44
CTSS-202ENST00000448301 WDR97A6NE52 1622 aa23.99■■□□□ 1.43
CTSS-202ENST00000448301 SOGA1O94964 1423 aa23.98■■□□□ 1.43
CTSS-202ENST00000448301 RAD54L2Q9Y4B4 1467 aa23.98■■□□□ 1.43
CTSS-202ENST00000448301 ABCA10Q8WWZ4 1543 aa23.91■■□□□ 1.42
CTSS-202ENST00000448301 EIF4G3O43432 1585 aaKnown RBP23.89■■□□□ 1.41
CTSS-202ENST00000448301 ZNF608Q9ULD9 1512 aaPredicted RBP23.89■■□□□ 1.41
CTSS-202ENST00000448301 TRIM41Q8WV44 630 aa23.83■■□□□ 1.4
CTSS-202ENST00000448301 ABCA5Q8WWZ7 1642 aa23.83■■□□□ 1.4
CTSS-202ENST00000448301 AQRO60306 1485 aaKnown RBP eCLIP23.78■■□□□ 1.4
CTSS-202ENST00000448301 TDRD9Q8NDG6 1382 aaKnown RBP23.78■■□□□ 1.4
CTSS-202ENST00000448301 PBRM1Q86U86 1689 aa23.77■■□□□ 1.4
CTSS-202ENST00000448301 SENP3Q9H4L4 574 aaPredicted RBP23.76■■□□□ 1.39
CTSS-202ENST00000448301 GAPVD1Q14C86 1478 aa23.74■■□□□ 1.39
CTSS-202ENST00000448301 GRIN2BQ13224 1484 aa23.69■■□□□ 1.38
CTSS-202ENST00000448301 KIF27Q86VH2 1401 aa23.67■■□□□ 1.38
CTSS-202ENST00000448301 ERICH3Q5RHP9 1530 aa23.65■■□□□ 1.38
CTSS-202ENST00000448301 SNAPC4Q5SXM2 1469 aa23.61■■□□□ 1.37
CTSS-202ENST00000448301 MAGI1Q96QZ7 1491 aaPredicted RBP23.61■■□□□ 1.37
CTSS-202ENST00000448301 ADAMTS12P58397 1594 aa23.56■■□□□ 1.36
CTSS-202ENST00000448301 RUSC2Q8N2Y8 1516 aa23.56■■□□□ 1.36
CTSS-202ENST00000448301 CUL7Q14999 1698 aa23.54■■□□□ 1.36
CTSS-202ENST00000448301 CHD1O14646 1710 aa23.54■■□□□ 1.36
CTSS-202ENST00000448301 IGF1RP08069 1367 aa23.5■■□□□ 1.35
CTSS-202ENST00000448301 SYNJ2O15056 1496 aa23.5■■□□□ 1.35
CTSS-202ENST00000448301 EEA1Q15075 1411 aa23.49■■□□□ 1.35
CTSS-202ENST00000448301 FHAD1B1AJZ9 1412 aa23.48■■□□□ 1.35
CTSS-202ENST00000448301 PHF23Q9BUL5 403 aaPredicted RBP23.48■■□□□ 1.35
CTSS-202ENST00000448301 GRIN2AQ12879 1464 aa23.4■■□□□ 1.34
CTSS-202ENST00000448301 CHMP7Q8WUX9 453 aaPredicted RBP23.39■■□□□ 1.33
CTSS-202ENST00000448301 CARMIL1Q5VZK9 1371 aa23.38■■□□□ 1.33
CTSS-202ENST00000448301 FBLN2P98095 1184 aa23.37■■□□□ 1.33
CTSS-202ENST00000448301 CSRNP3Q8WYN3 585 aa23.33■■□□□ 1.33
CTSS-202ENST00000448301 PRXQ9BXM0 1461 aa23.33■■□□□ 1.32
CTSS-202ENST00000448301 RAPGEF2Q9Y4G8 1499 aa23.31■■□□□ 1.32
CTSS-202ENST00000448301 OSCARQ8IYS5 282 aa23.3■■□□□ 1.32
CTSS-202ENST00000448301 FAM9AQ8IZU1 332 aaPredicted RBP23.29■■□□□ 1.32
CTSS-202ENST00000448301 CEP170Q5SW79 1584 aa23.29■■□□□ 1.32
CTSS-202ENST00000448301 NUP160Q12769 1436 aa23.28■■□□□ 1.32
CTSS-202ENST00000448301 KIF21BO75037 1637 aa23.27■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms