RNA–Protein interactions for RNA: ENST00000382470.1

USP17L6P-201, Transcript of ubiquitin specific peptidase 17-like family member 6, pseudogene, humanhuman

BASIC

Gene USP17L6P, Length 1,197 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L6P-201ENST00000382470 NISCHQ9Y2I1 1504 aa32.64■■■□□ 2.82
USP17L6P-201ENST00000382470 CCDC180Q9P1Z9 1646 aa28.69■■■□□ 2.18
USP17L6P-201ENST00000382470 ZCCHC6Q5VYS8 1495 aaKnown RBP27.44■■□□□ 1.98
USP17L6P-201ENST00000382470 DCAF1Q9Y4B6 1507 aa27.11■■□□□ 1.93
USP17L6P-201ENST00000382470 ABCC9O60706 1549 aa26.85■■□□□ 1.89
USP17L6P-201ENST00000382470 MYO15BQ96JP2 1530 aa26.8■■□□□ 1.88
USP17L6P-201ENST00000382470 DCAF8L2P0C7V8 631 aa26.78■■□□□ 1.88
USP17L6P-201ENST00000382470 NACADO15069 1562 aa26.64■■□□□ 1.86
USP17L6P-201ENST00000382470 SHROOM4Q9ULL8 1493 aa26.42■■□□□ 1.82
USP17L6P-201ENST00000382470 RB1CC1Q8TDY2 1594 aa26.42■■□□□ 1.82
USP17L6P-201ENST00000382470 SCRIBQ14160 1630 aa26.19■■□□□ 1.78
USP17L6P-201ENST00000382470 UNC13AQ9UPW8 1703 aa25.86■■□□□ 1.73
USP17L6P-201ENST00000382470 BICRAQ9NZM4 1560 aa25.47■■□□□ 1.67
USP17L6P-201ENST00000382470 SUPT5HO00267 1087 aaKnown RBP25.43■■□□□ 1.66
USP17L6P-201ENST00000382470 BAZ1AQ9NRL2 1556 aaPredicted RBP25.29■■□□□ 1.64
USP17L6P-201ENST00000382470 RSF1Q96T23 1441 aaPredicted RBP25.23■■□□□ 1.63
USP17L6P-201ENST00000382470 CECR2Q9BXF3 1484 aa25.22■■□□□ 1.63
USP17L6P-201ENST00000382470 PABPN1Q86U42 306 aaKnown RBP eCLIP25.19■■□□□ 1.62
USP17L6P-201ENST00000382470 SMARCA4P51532 1647 aa25.15■■□□□ 1.62
USP17L6P-201ENST00000382470 MROH2BQ7Z745 1585 aa25.14■■□□□ 1.62
USP17L6P-201ENST00000382470 WIZO95785 1651 aa24.99■■□□□ 1.59
USP17L6P-201ENST00000382470 PEG3Q9GZU2 1588 aa24.87■■□□□ 1.57
USP17L6P-201ENST00000382470 TOP2AP11388 1531 aaKnown RBP24.81■■□□□ 1.56
USP17L6P-201ENST00000382470 SMARCA2P51531 1590 aa24.79■■□□□ 1.56
USP17L6P-201ENST00000382470 EIF4G1Q04637 1599 aaKnown RBP24.76■■□□□ 1.55
USP17L6P-201ENST00000382470 ATAD2BQ9ULI0 1458 aa24.65■■□□□ 1.54
USP17L6P-201ENST00000382470 BAZ1BQ9UIG0 1483 aaKnown RBP24.58■■□□□ 1.53
USP17L6P-201ENST00000382470 HMGXB3Q12766 1538 aa24.55■■□□□ 1.52
USP17L6P-201ENST00000382470 NCAPD3P42695 1498 aa24.47■■□□□ 1.51
USP17L6P-201ENST00000382470 CCDC88BA6NC98 1476 aa24.44■■□□□ 1.5
USP17L6P-201ENST00000382470 CC2D2AQ9P2K1 1620 aa24.39■■□□□ 1.5
USP17L6P-201ENST00000382470 CHIC1Q5VXU3 224 aa24.34■■□□□ 1.49
USP17L6P-201ENST00000382470 PRDM2Q13029 1718 aa24.07■■□□□ 1.44
USP17L6P-201ENST00000382470 TRIM41Q8WV44 630 aa24.01■■□□□ 1.43
USP17L6P-201ENST00000382470 CFTRP13569 1480 aa23.92■■□□□ 1.42
USP17L6P-201ENST00000382470 ABCC8Q09428 1581 aa23.91■■□□□ 1.42
USP17L6P-201ENST00000382470 WRNQ14191 1432 aaPredicted RBP eCLIP23.83■■□□□ 1.4
USP17L6P-201ENST00000382470 CADPSQ9ULU8 1353 aa23.82■■□□□ 1.4
USP17L6P-201ENST00000382470 LAMC3Q9Y6N6 1575 aa23.75■■□□□ 1.39
USP17L6P-201ENST00000382470 BIVM-ERCC5R4GMW8 1640 aa23.72■■□□□ 1.39
USP17L6P-201ENST00000382470 SYNJ1O43426 1573 aa23.71■■□□□ 1.39
USP17L6P-201ENST00000382470 TOP2BQ02880 1626 aa23.7■■□□□ 1.39
USP17L6P-201ENST00000382470 EEA1Q15075 1411 aa23.6■■□□□ 1.37
USP17L6P-201ENST00000382470 FANCD2Q9BXW9 1451 aa23.59■■□□□ 1.37
USP17L6P-201ENST00000382470 CUX1P39880 1505 aa23.54■■□□□ 1.36
USP17L6P-201ENST00000382470 NESP48681 1621 aa23.52■■□□□ 1.36
USP17L6P-201ENST00000382470 PDS5BQ9NTI5 1447 aa23.52■■□□□ 1.36
USP17L6P-201ENST00000382470 CEP164Q9UPV0 1460 aa23.49■■□□□ 1.35
USP17L6P-201ENST00000382470 DNAJC5BQ9UF47 199 aa23.46■■□□□ 1.35
USP17L6P-201ENST00000382470 DNMBPQ6XZF7 1577 aa23.45■■□□□ 1.34
USP17L6P-201ENST00000382470 FAM9AQ8IZU1 332 aaPredicted RBP23.44■■□□□ 1.34
USP17L6P-201ENST00000382470 KIF21AQ7Z4S6 1674 aa23.42■■□□□ 1.34
USP17L6P-201ENST00000382470 SOGA1O94964 1423 aa23.39■■□□□ 1.33
USP17L6P-201ENST00000382470 TOPBP1Q92547 1522 aa23.33■■□□□ 1.33
USP17L6P-201ENST00000382470 FGD5Q6ZNL6 1462 aa23.31■■□□□ 1.32
USP17L6P-201ENST00000382470 LOC105371045A0A1W2PR82 267 aa23.31■■□□□ 1.32
USP17L6P-201ENST00000382470 CSRNP3Q8WYN3 585 aa23.28■■□□□ 1.32
USP17L6P-201ENST00000382470 KIF21BO75037 1637 aa23.28■■□□□ 1.32
USP17L6P-201ENST00000382470 RUSC2Q8N2Y8 1516 aa23.27■■□□□ 1.32
USP17L6P-201ENST00000382470 KIF27Q86VH2 1401 aa23.26■■□□□ 1.31
USP17L6P-201ENST00000382470 URB2Q14146 1524 aaKnown RBP23.24■■□□□ 1.31
USP17L6P-201ENST00000382470 MRC2Q9UBG0 1479 aa23.22■■□□□ 1.31
USP17L6P-201ENST00000382470 GOLGA3Q08378 1498 aa23.21■■□□□ 1.31
USP17L6P-201ENST00000382470 POLA1P09884 1462 aaPredicted RBP23.19■■□□□ 1.3
USP17L6P-201ENST00000382470 CUX2O14529 1486 aa23.16■■□□□ 1.3
USP17L6P-201ENST00000382470 ABCA10Q8WWZ4 1543 aa23.15■■□□□ 1.3
USP17L6P-201ENST00000382470 ERCC6Q03468 1493 aa23.15■■□□□ 1.3
USP17L6P-201ENST00000382470 WDR97A6NE52 1622 aa23.15■■□□□ 1.3
USP17L6P-201ENST00000382470 ERICH3Q5RHP9 1530 aa23.13■■□□□ 1.29
USP17L6P-201ENST00000382470 WDR62O43379 1518 aa23.09■■□□□ 1.29
USP17L6P-201ENST00000382470 TNIKQ9UKE5 1360 aa23.08■■□□□ 1.29
USP17L6P-201ENST00000382470 PRXQ9BXM0 1461 aa23.05■■□□□ 1.28
USP17L6P-201ENST00000382470 EHMT2Q96KQ7 1210 aa23.04■■□□□ 1.28
USP17L6P-201ENST00000382470 RAD54L2Q9Y4B4 1467 aa23.04■■□□□ 1.28
USP17L6P-201ENST00000382470 THOC2Q8NI27 1593 aaKnown RBP23.03■■□□□ 1.28
USP17L6P-201ENST00000382470 CUL7Q14999 1698 aa23.01■■□□□ 1.27
USP17L6P-201ENST00000382470 TARBP1Q13395 1621 aaKnown RBP23■■□□□ 1.27
USP17L6P-201ENST00000382470 UBTFP17480 764 aaKnown RBP23■■□□□ 1.27
USP17L6P-201ENST00000382470 ABCA5Q8WWZ7 1642 aa23■■□□□ 1.27
USP17L6P-201ENST00000382470 RAPGEF2Q9Y4G8 1499 aa22.97■■□□□ 1.27
USP17L6P-201ENST00000382470 IFT140Q96RY7 1462 aa22.94■■□□□ 1.26
USP17L6P-201ENST00000382470 CEP162Q5TB80 1403 aa22.94■■□□□ 1.26
USP17L6P-201ENST00000382470 IGF1RP08069 1367 aa22.93■■□□□ 1.26
USP17L6P-201ENST00000382470 PBRM1Q86U86 1689 aa22.9■■□□□ 1.26
USP17L6P-201ENST00000382470 GAPVD1Q14C86 1478 aa22.89■■□□□ 1.25
USP17L6P-201ENST00000382470 CARMIL1Q5VZK9 1371 aa22.87■■□□□ 1.25
USP17L6P-201ENST00000382470 TDRD9Q8NDG6 1382 aaKnown RBP22.8■■□□□ 1.24
USP17L6P-201ENST00000382470 CLIP1P30622 1438 aa22.78■■□□□ 1.24
USP17L6P-201ENST00000382470 CTTNBP2Q8WZ74 1663 aa22.76■■□□□ 1.23
USP17L6P-201ENST00000382470 GRIN2BQ13224 1484 aa22.75■■□□□ 1.23
USP17L6P-201ENST00000382470 EIF4G3O43432 1585 aaKnown RBP22.74■■□□□ 1.23
USP17L6P-201ENST00000382470 ADAMTS12P58397 1594 aa22.71■■□□□ 1.23
USP17L6P-201ENST00000382470 FHAD1B1AJZ9 1412 aa22.67■■□□□ 1.22
USP17L6P-201ENST00000382470 AQRO60306 1485 aaKnown RBP eCLIP22.66■■□□□ 1.22
USP17L6P-201ENST00000382470 ZNF608Q9ULD9 1512 aaPredicted RBP22.66■■□□□ 1.22
USP17L6P-201ENST00000382470 MAGI1Q96QZ7 1491 aaPredicted RBP22.6■■□□□ 1.21
USP17L6P-201ENST00000382470 VPS8Q8N3P4 1428 aa22.6■■□□□ 1.21
USP17L6P-201ENST00000382470 EFCAB5A4FU69 1503 aa22.58■■□□□ 1.21
USP17L6P-201ENST00000382470 SNAPC4Q5SXM2 1469 aa22.55■■□□□ 1.2
USP17L6P-201ENST00000382470 ARAP1Q96P48 1450 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms