RNA–Protein interactions for RNA: ENST00000317338.16

SEZ6-201, Transcript of seizure related 6 homolog, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SEZ6, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEZ6-201ENST00000317338 NISCHQ9Y2I1 1504 aa27.43■■□□□ 1.98
SEZ6-201ENST00000317338 DCAF8L2P0C7V8 631 aa27.17■■□□□ 1.94
SEZ6-201ENST00000317338 SHROOM4Q9ULL8 1493 aa25.12■■□□□ 1.61
SEZ6-201ENST00000317338 SUPT5HO00267 1087 aaKnown RBP25.02■■□□□ 1.6
SEZ6-201ENST00000317338 ABCC9O60706 1549 aa24.1■■□□□ 1.45
SEZ6-201ENST00000317338 EHMT2Q96KQ7 1210 aa23.84■■□□□ 1.41
SEZ6-201ENST00000317338 PABPN1Q86U42 306 aaKnown RBP eCLIP23.63■■□□□ 1.37
SEZ6-201ENST00000317338 FAM9AQ8IZU1 332 aaPredicted RBP23.5■■□□□ 1.35
SEZ6-201ENST00000317338 TRIM41Q8WV44 630 aa23.28■■□□□ 1.32
SEZ6-201ENST00000317338 APLP2Q06481 763 aa23.21■■□□□ 1.31
SEZ6-201ENST00000317338 RANGAP1P46060 587 aaPredicted RBP23.15■■□□□ 1.3
SEZ6-201ENST00000317338 UBTFP17480 764 aaKnown RBP22.92■■□□□ 1.26
SEZ6-201ENST00000317338 ATP1B4Q9UN42 357 aaPredicted RBP22.92■■□□□ 1.26
SEZ6-201ENST00000317338 CCDC180Q9P1Z9 1646 aa22.85■■□□□ 1.25
SEZ6-201ENST00000317338 TTBK1Q5TCY1 1321 aaPredicted RBP22.81■■□□□ 1.24
SEZ6-201ENST00000317338 ZCCHC6Q5VYS8 1495 aaKnown RBP22.64■■□□□ 1.21
SEZ6-201ENST00000317338 SCRIBQ14160 1630 aa22.64■■□□□ 1.21
SEZ6-201ENST00000317338 RB1CC1Q8TDY2 1594 aa22.48■■□□□ 1.19
SEZ6-201ENST00000317338 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.43■■□□□ 1.18
SEZ6-201ENST00000317338 HNRNPUL2Q1KMD3 747 aaKnown RBP22.43■■□□□ 1.18
SEZ6-201ENST00000317338 CHIC1Q5VXU3 224 aa22.35■■□□□ 1.17
SEZ6-201ENST00000317338 FBLN2P98095 1184 aa22.31■■□□□ 1.16
SEZ6-201ENST00000317338 NACADO15069 1562 aa22.29■■□□□ 1.16
SEZ6-201ENST00000317338 MYT1LQ9UL68 1186 aa22.18■■□□□ 1.14
SEZ6-201ENST00000317338 PPARGC1BQ86YN6 1023 aaKnown RBP22.13■■□□□ 1.13
SEZ6-201ENST00000317338 PCGF6Q9BYE7 350 aa22.12■■□□□ 1.13
SEZ6-201ENST00000317338 LOC105371045A0A1W2PR82 267 aa22.12■■□□□ 1.13
SEZ6-201ENST00000317338 ITGAEP38570 1179 aa21.92■■□□□ 1.1
SEZ6-201ENST00000317338 CCER1Q8TC90 406 aaPredicted RBP21.84■■□□□ 1.09
SEZ6-201ENST00000317338 DCAF1Q9Y4B6 1507 aa21.81■■□□□ 1.08
SEZ6-201ENST00000317338 CSRNP3Q8WYN3 585 aa21.76■■□□□ 1.07
SEZ6-201ENST00000317338 P3H3Q8IVL6 736 aa21.72■■□□□ 1.07
SEZ6-201ENST00000317338 BAZ1BQ9UIG0 1483 aaKnown RBP21.7■■□□□ 1.06
SEZ6-201ENST00000317338 RSF1Q96T23 1441 aaPredicted RBP21.69■■□□□ 1.06
SEZ6-201ENST00000317338 ARID3CA6NKF2 412 aa21.65■■□□□ 1.06
SEZ6-201ENST00000317338 CECR2Q9BXF3 1484 aa21.6■■□□□ 1.05
SEZ6-201ENST00000317338 CHMP7Q8WUX9 453 aaPredicted RBP21.58■■□□□ 1.05
SEZ6-201ENST00000317338 FAM50AQ14320 339 aaKnown RBP21.54■■□□□ 1.04
SEZ6-201ENST00000317338 ERCC6Q03468 1493 aa21.53■■□□□ 1.04
SEZ6-201ENST00000317338 NPM1P06748 294 aaKnown RBP eCLIP21.52■■□□□ 1.04
SEZ6-201ENST00000317338 BAZ1AQ9NRL2 1556 aaPredicted RBP21.52■■□□□ 1.04
SEZ6-201ENST00000317338 TRIM26Q12899 539 aaPredicted RBP21.5■■□□□ 1.03
SEZ6-201ENST00000317338 MYO15BQ96JP2 1530 aa21.44■■□□□ 1.02
SEZ6-201ENST00000317338 ZEB1P37275 1124 aaPredicted RBP21.43■■□□□ 1.02
SEZ6-201ENST00000317338 CDK11AQ9UQ88 783 aaPredicted RBP21.4■■□□□ 1.02
SEZ6-201ENST00000317338 TRIM52Q96A61 297 aa21.31■■□□□ 1
SEZ6-201ENST00000317338 ZNF777Q9ULD5 760 aaPredicted RBP21.31■■□□□ 1
SEZ6-201ENST00000317338 WRNQ14191 1432 aaPredicted RBP eCLIP21.25■□□□□ 0.99
SEZ6-201ENST00000317338 MROH2BQ7Z745 1585 aa21.23■□□□□ 0.99
SEZ6-201ENST00000317338 POLR3GLQ9BT43 218 aa21.2■□□□□ 0.98
SEZ6-201ENST00000317338 SMARCA2P51531 1590 aa21.19■□□□□ 0.98
SEZ6-201ENST00000317338 PDS5BQ9NTI5 1447 aa21.16■□□□□ 0.98
SEZ6-201ENST00000317338 ESF1Q9H501 851 aaKnown RBP21.1■□□□□ 0.97
SEZ6-201ENST00000317338 KIF27Q86VH2 1401 aa21.07■□□□□ 0.96
SEZ6-201ENST00000317338 ATAD2BQ9ULI0 1458 aa21.04■□□□□ 0.96
SEZ6-201ENST00000317338 CADPSQ9ULU8 1353 aa21.02■□□□□ 0.96
SEZ6-201ENST00000317338 KCNH8Q96L42 1107 aa21.02■□□□□ 0.96
SEZ6-201ENST00000317338 CCDC88BA6NC98 1476 aa21.01■□□□□ 0.95
SEZ6-201ENST00000317338 PLPPR3Q6T4P5 718 aa20.99■□□□□ 0.95
SEZ6-201ENST00000317338 SLC4A1APQ9BWU0 796 aaKnown RBP20.99■□□□□ 0.95
SEZ6-201ENST00000317338 NEUROD1Q13562 356 aa20.96■□□□□ 0.95
SEZ6-201ENST00000317338 BCANQ96GW7 911 aa20.95■□□□□ 0.94
SEZ6-201ENST00000317338 CNGB1Q14028 1251 aaPredicted RBP20.94■□□□□ 0.94
SEZ6-201ENST00000317338 PLEKHD1A6NEE1 506 aa20.93■□□□□ 0.94
SEZ6-201ENST00000317338 EEA1Q15075 1411 aa20.93■□□□□ 0.94
SEZ6-201ENST00000317338 ZNF326Q5BKZ1 582 aaKnown RBP20.92■□□□□ 0.94
SEZ6-201ENST00000317338 TDRD9Q8NDG6 1382 aaKnown RBP20.9■□□□□ 0.94
SEZ6-201ENST00000317338 CUX2O14529 1486 aa20.9■□□□□ 0.94
SEZ6-201ENST00000317338 MTUS2Q5JR59 1369 aa20.89■□□□□ 0.94
SEZ6-201ENST00000317338 TSPY4P0CV99 314 aa20.87■□□□□ 0.93
SEZ6-201ENST00000317338 TSPY10P0CW01 314 aa20.87■□□□□ 0.93
SEZ6-201ENST00000317338 SOGA1O94964 1423 aa20.86■□□□□ 0.93
SEZ6-201ENST00000317338 CLIP1P30622 1438 aa20.86■□□□□ 0.93
SEZ6-201ENST00000317338 CARMIL1Q5VZK9 1371 aa20.83■□□□□ 0.92
SEZ6-201ENST00000317338 TRHP20396 242 aaPredicted RBP20.82■□□□□ 0.92
SEZ6-201ENST00000317338 WIZO95785 1651 aa20.81■□□□□ 0.92
SEZ6-201ENST00000317338 CHIC2Q9UKJ5 165 aa20.81■□□□□ 0.92
SEZ6-201ENST00000317338 SMARCA4P51532 1647 aa20.8■□□□□ 0.92
SEZ6-201ENST00000317338 STAG3Q9UJ98 1225 aa20.8■□□□□ 0.92
SEZ6-201ENST00000317338 CHGAP10645 457 aaKnown RBP20.78■□□□□ 0.92
SEZ6-201ENST00000317338 TOP2AP11388 1531 aaKnown RBP20.78■□□□□ 0.92
SEZ6-201ENST00000317338 PELP1Q8IZL8 1130 aaKnown RBP20.78■□□□□ 0.92
SEZ6-201ENST00000317338 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.76■□□□□ 0.91
SEZ6-201ENST00000317338 GOLGA3Q08378 1498 aa20.76■□□□□ 0.91
SEZ6-201ENST00000317338 CEP164Q9UPV0 1460 aa20.73■□□□□ 0.91
SEZ6-201ENST00000317338 EIF4G1Q04637 1599 aaKnown RBP20.73■□□□□ 0.91
SEZ6-201ENST00000317338 NCAPD3P42695 1498 aa20.69■□□□□ 0.9
SEZ6-201ENST00000317338 FANCD2Q9BXW9 1451 aa20.67■□□□□ 0.9
SEZ6-201ENST00000317338 DNAJC5BQ9UF47 199 aa20.67■□□□□ 0.9
SEZ6-201ENST00000317338 CENPBP07199 599 aaPredicted RBP20.66■□□□□ 0.9
SEZ6-201ENST00000317338 YTHDC1Q96MU7 727 aaKnown RBP20.65■□□□□ 0.9
SEZ6-201ENST00000317338 HRCP23327 699 aa20.64■□□□□ 0.9
SEZ6-201ENST00000317338 CFDP1Q9UEE9 299 aaPredicted RBP20.64■□□□□ 0.89
SEZ6-201ENST00000317338 ARID4BQ4LE39 1312 aaPredicted RBP20.63■□□□□ 0.89
SEZ6-201ENST00000317338 ABCC8Q09428 1581 aa20.62■□□□□ 0.89
SEZ6-201ENST00000317338 CEP162Q5TB80 1403 aa20.6■□□□□ 0.89
SEZ6-201ENST00000317338 TNIKQ9UKE5 1360 aa20.58■□□□□ 0.88
SEZ6-201ENST00000317338 OSCARQ8IYS5 282 aa20.55■□□□□ 0.88
SEZ6-201ENST00000317338 CARMIL2Q6F5E8 1435 aa20.54■□□□□ 0.88
SEZ6-201ENST00000317338 RRP7BPQ9NSQ0 103 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms