RNA–Protein interactions for RNA: ENST00000371560.4

GRIN1-207, Transcript of glutamate ionotropic receptor NMDA type subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GRIN1, Length 3,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN1-207ENST00000371560 NISCHQ9Y2I1 1504 aa27.28■■□□□ 1.96
GRIN1-207ENST00000371560 SHROOM4Q9ULL8 1493 aa24.3■■□□□ 1.48
GRIN1-207ENST00000371560 DCAF8L2P0C7V8 631 aa24.3■■□□□ 1.48
GRIN1-207ENST00000371560 SUPT5HO00267 1087 aaKnown RBP23.96■■□□□ 1.43
GRIN1-207ENST00000371560 PCGF6Q9BYE7 350 aa23.05■■□□□ 1.28
GRIN1-207ENST00000371560 PPARGC1BQ86YN6 1023 aaKnown RBP23■■□□□ 1.27
GRIN1-207ENST00000371560 ZCCHC6Q5VYS8 1495 aaKnown RBP22.89■■□□□ 1.26
GRIN1-207ENST00000371560 HRCP23327 699 aa22.76■■□□□ 1.23
GRIN1-207ENST00000371560 CCDC180Q9P1Z9 1646 aa22.71■■□□□ 1.23
GRIN1-207ENST00000371560 CHIC1Q5VXU3 224 aa22.65■■□□□ 1.22
GRIN1-207ENST00000371560 EHMT2Q96KQ7 1210 aa22.48■■□□□ 1.19
GRIN1-207ENST00000371560 LOC105371045A0A1W2PR82 267 aa22.35■■□□□ 1.17
GRIN1-207ENST00000371560 FAM9AQ8IZU1 332 aaPredicted RBP22.32■■□□□ 1.16
GRIN1-207ENST00000371560 ABCC9O60706 1549 aa22.26■■□□□ 1.15
GRIN1-207ENST00000371560 MYO15BQ96JP2 1530 aa22.16■■□□□ 1.14
GRIN1-207ENST00000371560 TRIM41Q8WV44 630 aa22.11■■□□□ 1.13
GRIN1-207ENST00000371560 SCRIBQ14160 1630 aa22.03■■□□□ 1.12
GRIN1-207ENST00000371560 DCAF1Q9Y4B6 1507 aa21.93■■□□□ 1.1
GRIN1-207ENST00000371560 PELP1Q8IZL8 1130 aaKnown RBP21.84■■□□□ 1.09
GRIN1-207ENST00000371560 TTBK1Q5TCY1 1321 aaPredicted RBP21.76■■□□□ 1.07
GRIN1-207ENST00000371560 RSF1Q96T23 1441 aaPredicted RBP21.75■■□□□ 1.07
GRIN1-207ENST00000371560 SCAF1Q9H7N4 1312 aaKnown RBP21.74■■□□□ 1.07
GRIN1-207ENST00000371560 PABPN1Q86U42 306 aaKnown RBP eCLIP21.66■■□□□ 1.06
GRIN1-207ENST00000371560 TRIM26Q12899 539 aaPredicted RBP21.65■■□□□ 1.06
GRIN1-207ENST00000371560 CECR2Q9BXF3 1484 aa21.57■■□□□ 1.04
GRIN1-207ENST00000371560 YTHDC1Q96MU7 727 aaKnown RBP21.51■■□□□ 1.03
GRIN1-207ENST00000371560 NACADO15069 1562 aa21.38■■□□□ 1.01
GRIN1-207ENST00000371560 RB1CC1Q8TDY2 1594 aa21.38■■□□□ 1.01
GRIN1-207ENST00000371560 GTF3C3Q9Y5Q9 886 aa21.37■■□□□ 1.01
GRIN1-207ENST00000371560 CCER1Q8TC90 406 aaPredicted RBP21.36■■□□□ 1.01
GRIN1-207ENST00000371560 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.35■■□□□ 1.01
GRIN1-207ENST00000371560 ZEB1P37275 1124 aaPredicted RBP21.34■■□□□ 1.01
GRIN1-207ENST00000371560 MROH2BQ7Z745 1585 aa21.33■■□□□ 1.01
GRIN1-207ENST00000371560 RANGAP1P46060 587 aaPredicted RBP21.32■■□□□ 1
GRIN1-207ENST00000371560 UBTFP17480 764 aaKnown RBP21.3■■□□□ 1
GRIN1-207ENST00000371560 NEUROD1Q13562 356 aa21.29■■□□□ 1
GRIN1-207ENST00000371560 CENPBP07199 599 aaPredicted RBP21.19■□□□□ 0.98
GRIN1-207ENST00000371560 ACIN1Q9UKV3 1341 aaKnown RBP21.16■□□□□ 0.98
GRIN1-207ENST00000371560 WIZO95785 1651 aa21.14■□□□□ 0.97
GRIN1-207ENST00000371560 DIEXFQ68CQ4 756 aaKnown RBP21.06■□□□□ 0.96
GRIN1-207ENST00000371560 BAZ1AQ9NRL2 1556 aaPredicted RBP20.97■□□□□ 0.95
GRIN1-207ENST00000371560 CSRNP3Q8WYN3 585 aa20.92■□□□□ 0.94
GRIN1-207ENST00000371560 APLP2Q06481 763 aa20.89■□□□□ 0.94
GRIN1-207ENST00000371560 CCDC88BA6NC98 1476 aa20.87■□□□□ 0.93
GRIN1-207ENST00000371560 ABCC8Q09428 1581 aa20.87■□□□□ 0.93
GRIN1-207ENST00000371560 MYT1Q01538 1121 aa20.86■□□□□ 0.93
GRIN1-207ENST00000371560 SOGA1O94964 1423 aa20.79■□□□□ 0.92
GRIN1-207ENST00000371560 HNRNPUL2Q1KMD3 747 aaKnown RBP20.78■□□□□ 0.92
GRIN1-207ENST00000371560 SMARCA4P51532 1647 aa20.69■□□□□ 0.9
GRIN1-207ENST00000371560 TOP2AP11388 1531 aaKnown RBP20.67■□□□□ 0.9
GRIN1-207ENST00000371560 RUSC2Q8N2Y8 1516 aa20.63■□□□□ 0.89
GRIN1-207ENST00000371560 CEP162Q5TB80 1403 aa20.62■□□□□ 0.89
GRIN1-207ENST00000371560 WRNQ14191 1432 aaPredicted RBP eCLIP20.61■□□□□ 0.89
GRIN1-207ENST00000371560 SMARCA2P51531 1590 aa20.56■□□□□ 0.88
GRIN1-207ENST00000371560 BAZ1BQ9UIG0 1483 aaKnown RBP20.54■□□□□ 0.88
GRIN1-207ENST00000371560 ATP1B4Q9UN42 357 aaPredicted RBP20.54■□□□□ 0.88
GRIN1-207ENST00000371560 BCANQ96GW7 911 aa20.51■□□□□ 0.87
GRIN1-207ENST00000371560 ITGAEP38570 1179 aa20.49■□□□□ 0.87
GRIN1-207ENST00000371560 MIER1Q8N108 512 aa20.49■□□□□ 0.87
GRIN1-207ENST00000371560 TNIKQ9UKE5 1360 aa20.48■□□□□ 0.87
GRIN1-207ENST00000371560 ZNF316A6NFI3 1004 aaPredicted RBP20.42■□□□□ 0.86
GRIN1-207ENST00000371560 ATAD2BQ9ULI0 1458 aa20.42■□□□□ 0.86
GRIN1-207ENST00000371560 UNC13AQ9UPW8 1703 aa20.39■□□□□ 0.85
GRIN1-207ENST00000371560 GOLGA3Q08378 1498 aa20.39■□□□□ 0.85
GRIN1-207ENST00000371560 BICRAQ9NZM4 1560 aa20.38■□□□□ 0.85
GRIN1-207ENST00000371560 EEA1Q15075 1411 aa20.37■□□□□ 0.85
GRIN1-207ENST00000371560 CLIP1P30622 1438 aa20.37■□□□□ 0.85
GRIN1-207ENST00000371560 P3H3Q8IVL6 736 aa20.29■□□□□ 0.84
GRIN1-207ENST00000371560 CEP164Q9UPV0 1460 aa20.26■□□□□ 0.83
GRIN1-207ENST00000371560 EIF4G1Q04637 1599 aaKnown RBP20.2■□□□□ 0.82
GRIN1-207ENST00000371560 RAPGEF2Q9Y4G8 1499 aa20.2■□□□□ 0.82
GRIN1-207ENST00000371560 SYNJ1O43426 1573 aa20.16■□□□□ 0.82
GRIN1-207ENST00000371560 KANK4Q5T7N3 995 aaPredicted RBP20.09■□□□□ 0.81
GRIN1-207ENST00000371560 BCL11AQ9H165 835 aa20.09■□□□□ 0.81
GRIN1-207ENST00000371560 FAM50AQ14320 339 aaKnown RBP20.08■□□□□ 0.8
GRIN1-207ENST00000371560 VPS8Q8N3P4 1428 aa20.05■□□□□ 0.8
GRIN1-207ENST00000371560 KIF27Q86VH2 1401 aa20.03■□□□□ 0.8
GRIN1-207ENST00000371560 SUPT16HQ9Y5B9 1047 aaKnown RBP19.99■□□□□ 0.79
GRIN1-207ENST00000371560 ERICH6Q7L0X2 663 aa19.99■□□□□ 0.79
GRIN1-207ENST00000371560 PEG3Q9GZU2 1588 aa19.95■□□□□ 0.78
GRIN1-207ENST00000371560 ANP32EQ9BTT0 268 aa19.94■□□□□ 0.78
GRIN1-207ENST00000371560 CUX2O14529 1486 aa19.94■□□□□ 0.78
GRIN1-207ENST00000371560 NCAPD3P42695 1498 aa19.93■□□□□ 0.78
GRIN1-207ENST00000371560 FKBP8Q14318 412 aa19.93■□□□□ 0.78
GRIN1-207ENST00000371560 ARID3CA6NKF2 412 aa19.89■□□□□ 0.77
GRIN1-207ENST00000371560 NEFLP07196 543 aa19.89■□□□□ 0.77
GRIN1-207ENST00000371560 TSHZ2Q9NRE2 1034 aa19.88■□□□□ 0.77
GRIN1-207ENST00000371560 CARMIL1Q5VZK9 1371 aa19.85■□□□□ 0.77
GRIN1-207ENST00000371560 CADPSQ9ULU8 1353 aa19.85■□□□□ 0.77
GRIN1-207ENST00000371560 KIF21BO75037 1637 aa19.83■□□□□ 0.77
GRIN1-207ENST00000371560 KCNH8Q96L42 1107 aa19.82■□□□□ 0.76
GRIN1-207ENST00000371560 CUX1P39880 1505 aa19.8■□□□□ 0.76
GRIN1-207ENST00000371560 HIRIP3Q9BW71 556 aaPredicted RBP19.8■□□□□ 0.76
GRIN1-207ENST00000371560 TOP2BQ02880 1626 aa19.79■□□□□ 0.76
GRIN1-207ENST00000371560 TRIM52Q96A61 297 aa19.78■□□□□ 0.76
GRIN1-207ENST00000371560 CFTRP13569 1480 aa19.77■□□□□ 0.75
GRIN1-207ENST00000371560 IGF1RP08069 1367 aa19.76■□□□□ 0.75
GRIN1-207ENST00000371560 CNGB1Q14028 1251 aaPredicted RBP19.76■□□□□ 0.75
GRIN1-207ENST00000371560 IRX6P78412 446 aaPredicted RBP19.75■□□□□ 0.75
GRIN1-207ENST00000371560 ARAP1Q96P48 1450 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms