RNA–Protein interactions for RNA: ENST00000256509.6

CHL1-201, Transcript of cell adhesion molecule L1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHL1, Length 8,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-201ENST00000256509 DCAF8L2P0C7V8 631 aa21.78■■□□□ 1.08
CHL1-201ENST00000256509 EHMT2Q96KQ7 1210 aa20.37■□□□□ 0.85
CHL1-201ENST00000256509 PELP1Q8IZL8 1130 aaKnown RBP20.09■□□□□ 0.81
CHL1-201ENST00000256509 SUPT5HO00267 1087 aaKnown RBP19.74■□□□□ 0.75
CHL1-201ENST00000256509 FAM9AQ8IZU1 332 aaPredicted RBP19.56■□□□□ 0.72
CHL1-201ENST00000256509 TTBK1Q5TCY1 1321 aaPredicted RBP19.54■□□□□ 0.72
CHL1-201ENST00000256509 APLP2Q06481 763 aa19.46■□□□□ 0.71
CHL1-201ENST00000256509 RANGAP1P46060 587 aaPredicted RBP19.4■□□□□ 0.7
CHL1-201ENST00000256509 ATP1B4Q9UN42 357 aaPredicted RBP19.37■□□□□ 0.69
CHL1-201ENST00000256509 ERICH6Q7L0X2 663 aa19.29■□□□□ 0.68
CHL1-201ENST00000256509 SHROOM4Q9ULL8 1493 aa19.2■□□□□ 0.66
CHL1-201ENST00000256509 CHIC1Q5VXU3 224 aa19.1■□□□□ 0.65
CHL1-201ENST00000256509 MYT1LQ9UL68 1186 aa19.07■□□□□ 0.64
CHL1-201ENST00000256509 CCER1Q8TC90 406 aaPredicted RBP19.02■□□□□ 0.64
CHL1-201ENST00000256509 MYT1Q01538 1121 aa18.94■□□□□ 0.62
CHL1-201ENST00000256509 PCGF6Q9BYE7 350 aa18.77■□□□□ 0.59
CHL1-201ENST00000256509 SLC4A1APQ9BWU0 796 aaKnown RBP18.69■□□□□ 0.58
CHL1-201ENST00000256509 POLR3GLQ9BT43 218 aa18.68■□□□□ 0.58
CHL1-201ENST00000256509 CNGB1Q14028 1251 aaPredicted RBP18.68■□□□□ 0.58
CHL1-201ENST00000256509 YTHDC1Q96MU7 727 aaKnown RBP18.64■□□□□ 0.57
CHL1-201ENST00000256509 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.52■□□□□ 0.55
CHL1-201ENST00000256509 HNRNPUL2Q1KMD3 747 aaKnown RBP18.52■□□□□ 0.55
CHL1-201ENST00000256509 DAXXQ9UER7 740 aaPredicted RBP18.49■□□□□ 0.55
CHL1-201ENST00000256509 NEFLP07196 543 aa18.45■□□□□ 0.54
CHL1-201ENST00000256509 SLC24A1O60721 1099 aa18.34■□□□□ 0.53
CHL1-201ENST00000256509 UBTFP17480 764 aaKnown RBP18.33■□□□□ 0.53
CHL1-201ENST00000256509 BCL11AQ9H165 835 aa18.28■□□□□ 0.52
CHL1-201ENST00000256509 CENPBP07199 599 aaPredicted RBP18.25■□□□□ 0.51
CHL1-201ENST00000256509 ITGAEP38570 1179 aa18.22■□□□□ 0.51
CHL1-201ENST00000256509 PPARGC1BQ86YN6 1023 aaKnown RBP18.18■□□□□ 0.5
CHL1-201ENST00000256509 CLSPNQ9HAW4 1339 aa18.11■□□□□ 0.49
CHL1-201ENST00000256509 PLPPR3Q6T4P5 718 aa18.04■□□□□ 0.48
CHL1-201ENST00000256509 BCANQ96GW7 911 aa18.02■□□□□ 0.48
CHL1-201ENST00000256509 TRIM41Q8WV44 630 aa17.98■□□□□ 0.47
CHL1-201ENST00000256509 ZNF316A6NFI3 1004 aaPredicted RBP17.94■□□□□ 0.46
CHL1-201ENST00000256509 ZBTB47Q9UFB7 747 aaPredicted RBP17.78■□□□□ 0.44
CHL1-201ENST00000256509 A0A0G2JS52 829 aa17.7■□□□□ 0.42
CHL1-201ENST00000256509 ZEB1P37275 1124 aaPredicted RBP17.58■□□□□ 0.4
CHL1-201ENST00000256509 FBLN2P98095 1184 aa17.58■□□□□ 0.4
CHL1-201ENST00000256509 SCAF1Q9H7N4 1312 aaKnown RBP17.57■□□□□ 0.4
CHL1-201ENST00000256509 RTL5Q5HYW3 569 aaPredicted RBP17.55■□□□□ 0.4
CHL1-201ENST00000256509 ZNF326Q5BKZ1 582 aaKnown RBP17.55■□□□□ 0.4
CHL1-201ENST00000256509 PLEKHG5O94827 1062 aa17.52■□□□□ 0.4
CHL1-201ENST00000256509 TRIM52Q96A61 297 aa17.49■□□□□ 0.39
CHL1-201ENST00000256509 CANXP27824 592 aaKnown RBP17.46■□□□□ 0.38
CHL1-201ENST00000256509 FAM50AQ14320 339 aaKnown RBP17.42■□□□□ 0.38
CHL1-201ENST00000256509 ESF1Q9H501 851 aaKnown RBP17.41■□□□□ 0.38
CHL1-201ENST00000256509 TULP1O00294 542 aaPredicted RBP17.41■□□□□ 0.38
CHL1-201ENST00000256509 NEFMP07197 916 aa17.41■□□□□ 0.38
CHL1-201ENST00000256509 NISCHQ9Y2I1 1504 aa17.4■□□□□ 0.38
CHL1-201ENST00000256509 NCBP3Q53F19 620 aaKnown RBP17.36■□□□□ 0.37
CHL1-201ENST00000256509 NEUROD1Q13562 356 aa17.33■□□□□ 0.36
CHL1-201ENST00000256509 STAG3Q9UJ98 1225 aa17.3■□□□□ 0.36
CHL1-201ENST00000256509 ARID3CA6NKF2 412 aa17.28■□□□□ 0.36
CHL1-201ENST00000256509 SENP3Q9H4L4 574 aaPredicted RBP17.24■□□□□ 0.35
CHL1-201ENST00000256509 ZBTB7CA1YPR0 619 aa17.21■□□□□ 0.35
CHL1-201ENST00000256509 CHGAP10645 457 aaKnown RBP17.21■□□□□ 0.34
CHL1-201ENST00000256509 CDK11BP21127 795 aaKnown RBP17.2■□□□□ 0.34
CHL1-201ENST00000256509 CDK11AQ9UQ88 783 aaPredicted RBP17.2■□□□□ 0.34
CHL1-201ENST00000256509 HSP90AA1P07900 732 aaKnown RBP17.11■□□□□ 0.33
CHL1-201ENST00000256509 ARXQ96QS3 562 aa17.1■□□□□ 0.33
CHL1-201ENST00000256509 NPM2Q86SE8 214 aaKnown RBP17.07■□□□□ 0.32
CHL1-201ENST00000256509 C14orf37Q86TY3 774 aa17.04■□□□□ 0.32
CHL1-201ENST00000256509 ZNF777Q9ULD5 760 aaPredicted RBP17.03■□□□□ 0.32
CHL1-201ENST00000256509 HAP1P54257 671 aaPredicted RBP17■□□□□ 0.31
CHL1-201ENST00000256509 NPHP1O15259 732 aa16.94■□□□□ 0.3
CHL1-201ENST00000256509 ANP32BQ92688 251 aaKnown RBP16.94■□□□□ 0.3
CHL1-201ENST00000256509 TAOK2Q9UL54 1235 aa16.94■□□□□ 0.3
CHL1-201ENST00000256509 GLIPR1L2Q4G1C9 344 aa16.92■□□□□ 0.3
CHL1-201ENST00000256509 SALL2Q9Y467 1007 aaPredicted RBP16.91■□□□□ 0.3
CHL1-201ENST00000256509 EIF5BO60841 1220 aaKnown RBP16.91■□□□□ 0.3
CHL1-201ENST00000256509 P3H3Q8IVL6 736 aa16.88■□□□□ 0.29
CHL1-201ENST00000256509 LOC105371045A0A1W2PR82 267 aa16.88■□□□□ 0.29
CHL1-201ENST00000256509 TRIM26Q12899 539 aaPredicted RBP16.87■□□□□ 0.29
CHL1-201ENST00000256509 ANP32CO43423 234 aa16.86■□□□□ 0.29
CHL1-201ENST00000256509 PABPN1Q86U42 306 aaKnown RBP eCLIP16.85■□□□□ 0.29
CHL1-201ENST00000256509 NPM1P06748 294 aaKnown RBP eCLIP16.84■□□□□ 0.29
CHL1-201ENST00000256509 HRCP23327 699 aa16.83■□□□□ 0.29
CHL1-201ENST00000256509 TPRNQ4KMQ1 711 aa16.81■□□□□ 0.28
CHL1-201ENST00000256509 DIEXFQ68CQ4 756 aaKnown RBP16.76■□□□□ 0.27
CHL1-201ENST00000256509 CLSTN1O94985 981 aa16.76■□□□□ 0.27
CHL1-201ENST00000256509 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.76■□□□□ 0.27
CHL1-201ENST00000256509 LMOD2Q6P5Q4 547 aa16.71■□□□□ 0.27
CHL1-201ENST00000256509 ARID4BQ4LE39 1312 aaPredicted RBP16.7■□□□□ 0.26
CHL1-201ENST00000256509 ANP32AP39687 249 aaKnown RBP16.68■□□□□ 0.26
CHL1-201ENST00000256509 PRM3Q9NNZ6 103 aa16.68■□□□□ 0.26
CHL1-201ENST00000256509 UPF2Q9HAU5 1272 aaKnown RBP16.67■□□□□ 0.26
CHL1-201ENST00000256509 AMER1Q5JTC6 1135 aaPredicted RBP16.61■□□□□ 0.25
CHL1-201ENST00000256509 ISY1Q9ULR0 285 aaKnown RBP16.59■□□□□ 0.25
CHL1-201ENST00000256509 PPP1R15AO75807 674 aaPredicted RBP16.57■□□□□ 0.24
CHL1-201ENST00000256509 TRHP20396 242 aaPredicted RBP16.55■□□□□ 0.24
CHL1-201ENST00000256509 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.53■□□□□ 0.24
CHL1-201ENST00000256509 PPM1GO15355 546 aaPredicted RBP16.51■□□□□ 0.23
CHL1-201ENST00000256509 KDM2AQ9Y2K7 1162 aa16.51■□□□□ 0.23
CHL1-201ENST00000256509 KRI1Q8N9T8 703 aaKnown RBP16.51■□□□□ 0.23
CHL1-201ENST00000256509 MYH16Q9H6N6 1097 aa16.51■□□□□ 0.23
CHL1-201ENST00000256509 FAM9BQ8IZU0 186 aa16.49■□□□□ 0.23
CHL1-201ENST00000256509 GOLGA2Q08379 1002 aa16.49■□□□□ 0.23
CHL1-201ENST00000256509 ZRSR1Q15695 479 aaKnown RBP16.47■□□□□ 0.23
CHL1-201ENST00000256509 TNNT2P45379 298 aaPredicted RBP16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms