RNA–Protein interactions for RNA: ENST00000392027.2

ALPP-201, Transcript of alkaline phosphatase, placental, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALPP, Length 2,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPP-201ENST00000392027 NISCHQ9Y2I1 1504 aa26.18■■□□□ 1.78
ALPP-201ENST00000392027 HRCP23327 699 aa22.63■■□□□ 1.21
ALPP-201ENST00000392027 CCDC180Q9P1Z9 1646 aa22.51■■□□□ 1.19
ALPP-201ENST00000392027 PELP1Q8IZL8 1130 aaKnown RBP22.45■■□□□ 1.18
ALPP-201ENST00000392027 SHROOM4Q9ULL8 1493 aa22.32■■□□□ 1.16
ALPP-201ENST00000392027 SUPT5HO00267 1087 aaKnown RBP22.26■■□□□ 1.15
ALPP-201ENST00000392027 PPARGC1BQ86YN6 1023 aaKnown RBP22.26■■□□□ 1.15
ALPP-201ENST00000392027 PCGF6Q9BYE7 350 aa22.2■■□□□ 1.15
ALPP-201ENST00000392027 MYO15BQ96JP2 1530 aa22.04■■□□□ 1.12
ALPP-201ENST00000392027 DCAF8L2P0C7V8 631 aa22.03■■□□□ 1.12
ALPP-201ENST00000392027 ZCCHC6Q5VYS8 1495 aaKnown RBP22■■□□□ 1.11
ALPP-201ENST00000392027 CHIC1Q5VXU3 224 aa21.86■■□□□ 1.09
ALPP-201ENST00000392027 MYT1Q01538 1121 aa21.76■■□□□ 1.07
ALPP-201ENST00000392027 ABCC9O60706 1549 aa21.52■■□□□ 1.04
ALPP-201ENST00000392027 DCAF1Q9Y4B6 1507 aa21.49■■□□□ 1.03
ALPP-201ENST00000392027 SCAF1Q9H7N4 1312 aaKnown RBP21.49■■□□□ 1.03
ALPP-201ENST00000392027 LOC105371045A0A1W2PR82 267 aa21.44■■□□□ 1.02
ALPP-201ENST00000392027 TRIM26Q12899 539 aaPredicted RBP21.39■■□□□ 1.01
ALPP-201ENST00000392027 ZEB1P37275 1124 aaPredicted RBP21.18■□□□□ 0.98
ALPP-201ENST00000392027 SCRIBQ14160 1630 aa21.09■□□□□ 0.97
ALPP-201ENST00000392027 NACADO15069 1562 aa20.98■□□□□ 0.95
ALPP-201ENST00000392027 ACIN1Q9UKV3 1341 aaKnown RBP20.91■□□□□ 0.94
ALPP-201ENST00000392027 NEUROD1Q13562 356 aa20.89■□□□□ 0.93
ALPP-201ENST00000392027 RB1CC1Q8TDY2 1594 aa20.79■□□□□ 0.92
ALPP-201ENST00000392027 GTF3C3Q9Y5Q9 886 aa20.78■□□□□ 0.92
ALPP-201ENST00000392027 FAM9AQ8IZU1 332 aaPredicted RBP20.62■□□□□ 0.89
ALPP-201ENST00000392027 CENPBP07199 599 aaPredicted RBP20.61■□□□□ 0.89
ALPP-201ENST00000392027 EHMT2Q96KQ7 1210 aa20.61■□□□□ 0.89
ALPP-201ENST00000392027 TTBK1Q5TCY1 1321 aaPredicted RBP20.57■□□□□ 0.88
ALPP-201ENST00000392027 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.56■□□□□ 0.88
ALPP-201ENST00000392027 DIEXFQ68CQ4 756 aaKnown RBP20.53■□□□□ 0.88
ALPP-201ENST00000392027 CECR2Q9BXF3 1484 aa20.53■□□□□ 0.88
ALPP-201ENST00000392027 UNC13AQ9UPW8 1703 aa20.53■□□□□ 0.88
ALPP-201ENST00000392027 TRIM41Q8WV44 630 aa20.52■□□□□ 0.88
ALPP-201ENST00000392027 PABPN1Q86U42 306 aaKnown RBP eCLIP20.49■□□□□ 0.87
ALPP-201ENST00000392027 CCER1Q8TC90 406 aaPredicted RBP20.49■□□□□ 0.87
ALPP-201ENST00000392027 RSF1Q96T23 1441 aaPredicted RBP20.49■□□□□ 0.87
ALPP-201ENST00000392027 MROH2BQ7Z745 1585 aa20.37■□□□□ 0.85
ALPP-201ENST00000392027 YTHDC1Q96MU7 727 aaKnown RBP20.3■□□□□ 0.84
ALPP-201ENST00000392027 BICRAQ9NZM4 1560 aa20.29■□□□□ 0.84
ALPP-201ENST00000392027 WIZO95785 1651 aa20.24■□□□□ 0.83
ALPP-201ENST00000392027 BCL11AQ9H165 835 aa20.16■□□□□ 0.82
ALPP-201ENST00000392027 BAZ1AQ9NRL2 1556 aaPredicted RBP20.14■□□□□ 0.81
ALPP-201ENST00000392027 ZNF316A6NFI3 1004 aaPredicted RBP20.09■□□□□ 0.81
ALPP-201ENST00000392027 SMARCA4P51532 1647 aa20.07■□□□□ 0.8
ALPP-201ENST00000392027 MIER1Q8N108 512 aa20.02■□□□□ 0.8
ALPP-201ENST00000392027 ANP32EQ9BTT0 268 aa19.89■□□□□ 0.78
ALPP-201ENST00000392027 TOP2AP11388 1531 aaKnown RBP19.84■□□□□ 0.77
ALPP-201ENST00000392027 CCDC88BA6NC98 1476 aa19.79■□□□□ 0.76
ALPP-201ENST00000392027 SMARCA2P51531 1590 aa19.74■□□□□ 0.75
ALPP-201ENST00000392027 SUPT16HQ9Y5B9 1047 aaKnown RBP19.74■□□□□ 0.75
ALPP-201ENST00000392027 ATAD2BQ9ULI0 1458 aa19.73■□□□□ 0.75
ALPP-201ENST00000392027 WRNQ14191 1432 aaPredicted RBP eCLIP19.71■□□□□ 0.75
ALPP-201ENST00000392027 PRKCSHP14314 528 aaPredicted RBP19.69■□□□□ 0.74
ALPP-201ENST00000392027 PEG3Q9GZU2 1588 aa19.68■□□□□ 0.74
ALPP-201ENST00000392027 TSHZ2Q9NRE2 1034 aa19.68■□□□□ 0.74
ALPP-201ENST00000392027 CEP162Q5TB80 1403 aa19.66■□□□□ 0.74
ALPP-201ENST00000392027 EIF4G1Q04637 1599 aaKnown RBP19.65■□□□□ 0.74
ALPP-201ENST00000392027 CSRNP3Q8WYN3 585 aa19.65■□□□□ 0.74
ALPP-201ENST00000392027 HNRNPUL2Q1KMD3 747 aaKnown RBP19.63■□□□□ 0.73
ALPP-201ENST00000392027 BAZ1BQ9UIG0 1483 aaKnown RBP19.63■□□□□ 0.73
ALPP-201ENST00000392027 CLSPNQ9HAW4 1339 aa19.6■□□□□ 0.73
ALPP-201ENST00000392027 ABCC8Q09428 1581 aa19.56■□□□□ 0.72
ALPP-201ENST00000392027 UBTFP17480 764 aaKnown RBP19.49■□□□□ 0.71
ALPP-201ENST00000392027 TNIKQ9UKE5 1360 aa19.48■□□□□ 0.71
ALPP-201ENST00000392027 NCAPD3P42695 1498 aa19.43■□□□□ 0.7
ALPP-201ENST00000392027 SOGA1O94964 1423 aa19.42■□□□□ 0.7
ALPP-201ENST00000392027 BCANQ96GW7 911 aa19.4■□□□□ 0.7
ALPP-201ENST00000392027 ERICH6Q7L0X2 663 aa19.36■□□□□ 0.69
ALPP-201ENST00000392027 HMGXB3Q12766 1538 aa19.35■□□□□ 0.69
ALPP-201ENST00000392027 CC2D2AQ9P2K1 1620 aa19.35■□□□□ 0.69
ALPP-201ENST00000392027 RUSC2Q8N2Y8 1516 aa19.31■□□□□ 0.68
ALPP-201ENST00000392027 KCNH8Q96L42 1107 aa19.26■□□□□ 0.67
ALPP-201ENST00000392027 FKBP8Q14318 412 aa19.23■□□□□ 0.67
ALPP-201ENST00000392027 GOLGA3Q08378 1498 aa19.22■□□□□ 0.67
ALPP-201ENST00000392027 SYNJ1O43426 1573 aa19.21■□□□□ 0.67
ALPP-201ENST00000392027 RBM19Q9Y4C8 960 aaKnown RBP19.21■□□□□ 0.67
ALPP-201ENST00000392027 DNAJC5BQ9UF47 199 aa19.19■□□□□ 0.66
ALPP-201ENST00000392027 APLP2Q06481 763 aa19.17■□□□□ 0.66
ALPP-201ENST00000392027 EEA1Q15075 1411 aa19.17■□□□□ 0.66
ALPP-201ENST00000392027 DHX57Q6P158 1386 aaKnown RBP19.16■□□□□ 0.66
ALPP-201ENST00000392027 RANGAP1P46060 587 aaPredicted RBP19.12■□□□□ 0.65
ALPP-201ENST00000392027 CLIP1P30622 1438 aa19.12■□□□□ 0.65
ALPP-201ENST00000392027 CFTRP13569 1480 aa19.1■□□□□ 0.65
ALPP-201ENST00000392027 ITGAEP38570 1179 aa19.1■□□□□ 0.65
ALPP-201ENST00000392027 VPS8Q8N3P4 1428 aa19.08■□□□□ 0.64
ALPP-201ENST00000392027 MSH5O43196 834 aa19.06■□□□□ 0.64
ALPP-201ENST00000392027 CADPSQ9ULU8 1353 aa19.04■□□□□ 0.64
ALPP-201ENST00000392027 NEFLP07196 543 aa19.03■□□□□ 0.64
ALPP-201ENST00000392027 NESP48681 1621 aa19■□□□□ 0.63
ALPP-201ENST00000392027 CEP164Q9UPV0 1460 aa18.99■□□□□ 0.63
ALPP-201ENST00000392027 TOP2BQ02880 1626 aa18.99■□□□□ 0.63
ALPP-201ENST00000392027 CUX1P39880 1505 aa18.99■□□□□ 0.63
ALPP-201ENST00000392027 DDX10Q13206 875 aaKnown RBP18.94■□□□□ 0.62
ALPP-201ENST00000392027 TRIM52Q96A61 297 aa18.93■□□□□ 0.62
ALPP-201ENST00000392027 BIVM-ERCC5R4GMW8 1640 aa18.92■□□□□ 0.62
ALPP-201ENST00000392027 MYT1LQ9UL68 1186 aa18.9■□□□□ 0.62
ALPP-201ENST00000392027 KIF21BO75037 1637 aa18.89■□□□□ 0.61
ALPP-201ENST00000392027 PRDM2Q13029 1718 aa18.88■□□□□ 0.61
ALPP-201ENST00000392027 KANK4Q5T7N3 995 aaPredicted RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms