RNA–Protein interactions for RNA: ENST00000393937.6

LOXL3-202, Transcript of lysyl oxidase like 3, humanhuman

TSL 5 BASIC

Gene LOXL3, Length 2,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LOXL3-202ENST00000393937 NISCHQ9Y2I1 1504 aa30.16■■■□□ 2.42
LOXL3-202ENST00000393937 CCDC180Q9P1Z9 1646 aa25.79■■□□□ 1.72
LOXL3-202ENST00000393937 ZCCHC6Q5VYS8 1495 aaKnown RBP25.49■■□□□ 1.67
LOXL3-202ENST00000393937 SHROOM4Q9ULL8 1493 aa25.45■■□□□ 1.67
LOXL3-202ENST00000393937 SUPT5HO00267 1087 aaKnown RBP24.91■■□□□ 1.58
LOXL3-202ENST00000393937 DCAF8L2P0C7V8 631 aa24.91■■□□□ 1.58
LOXL3-202ENST00000393937 DCAF1Q9Y4B6 1507 aa24.78■■□□□ 1.56
LOXL3-202ENST00000393937 CHIC1Q5VXU3 224 aa24.33■■□□□ 1.49
LOXL3-202ENST00000393937 MYO15BQ96JP2 1530 aa24.28■■□□□ 1.48
LOXL3-202ENST00000393937 HRCP23327 699 aa24.08■■□□□ 1.45
LOXL3-202ENST00000393937 SCRIBQ14160 1630 aa24.08■■□□□ 1.44
LOXL3-202ENST00000393937 ABCC9O60706 1549 aa24.02■■□□□ 1.44
LOXL3-202ENST00000393937 PCGF6Q9BYE7 350 aa23.91■■□□□ 1.42
LOXL3-202ENST00000393937 NACADO15069 1562 aa23.86■■□□□ 1.41
LOXL3-202ENST00000393937 RSF1Q96T23 1441 aaPredicted RBP23.77■■□□□ 1.4
LOXL3-202ENST00000393937 LOC105371045A0A1W2PR82 267 aa23.65■■□□□ 1.38
LOXL3-202ENST00000393937 PPARGC1BQ86YN6 1023 aaKnown RBP23.55■■□□□ 1.36
LOXL3-202ENST00000393937 CECR2Q9BXF3 1484 aa23.52■■□□□ 1.36
LOXL3-202ENST00000393937 RB1CC1Q8TDY2 1594 aa23.51■■□□□ 1.35
LOXL3-202ENST00000393937 MROH2BQ7Z745 1585 aa23.43■■□□□ 1.34
LOXL3-202ENST00000393937 TRIM26Q12899 539 aaPredicted RBP23.37■■□□□ 1.33
LOXL3-202ENST00000393937 WIZO95785 1651 aa23.3■■□□□ 1.32
LOXL3-202ENST00000393937 UNC13AQ9UPW8 1703 aa23.2■■□□□ 1.31
LOXL3-202ENST00000393937 BAZ1AQ9NRL2 1556 aaPredicted RBP23.19■■□□□ 1.3
LOXL3-202ENST00000393937 TRIM41Q8WV44 630 aa23.18■■□□□ 1.3
LOXL3-202ENST00000393937 SMARCA4P51532 1647 aa23.03■■□□□ 1.28
LOXL3-202ENST00000393937 FAM9AQ8IZU1 332 aaPredicted RBP23.01■■□□□ 1.27
LOXL3-202ENST00000393937 ZEB1P37275 1124 aaPredicted RBP22.99■■□□□ 1.27
LOXL3-202ENST00000393937 EIF4G1Q04637 1599 aaKnown RBP22.94■■□□□ 1.26
LOXL3-202ENST00000393937 TOP2AP11388 1531 aaKnown RBP22.94■■□□□ 1.26
LOXL3-202ENST00000393937 BICRAQ9NZM4 1560 aa22.91■■□□□ 1.26
LOXL3-202ENST00000393937 PABPN1Q86U42 306 aaKnown RBP eCLIP22.85■■□□□ 1.25
LOXL3-202ENST00000393937 EHMT2Q96KQ7 1210 aa22.83■■□□□ 1.24
LOXL3-202ENST00000393937 SMARCA2P51531 1590 aa22.81■■□□□ 1.24
LOXL3-202ENST00000393937 CCDC88BA6NC98 1476 aa22.81■■□□□ 1.24
LOXL3-202ENST00000393937 ABCC8Q09428 1581 aa22.69■■□□□ 1.22
LOXL3-202ENST00000393937 PEG3Q9GZU2 1588 aa22.62■■□□□ 1.21
LOXL3-202ENST00000393937 ATAD2BQ9ULI0 1458 aa22.46■■□□□ 1.19
LOXL3-202ENST00000393937 SOGA1O94964 1423 aa22.41■■□□□ 1.18
LOXL3-202ENST00000393937 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.39■■□□□ 1.18
LOXL3-202ENST00000393937 BAZ1BQ9UIG0 1483 aaKnown RBP22.38■■□□□ 1.17
LOXL3-202ENST00000393937 SCAF1Q9H7N4 1312 aaKnown RBP22.37■■□□□ 1.17
LOXL3-202ENST00000393937 CCER1Q8TC90 406 aaPredicted RBP22.36■■□□□ 1.17
LOXL3-202ENST00000393937 WRNQ14191 1432 aaPredicted RBP eCLIP22.32■■□□□ 1.16
LOXL3-202ENST00000393937 RUSC2Q8N2Y8 1516 aa22.32■■□□□ 1.16
LOXL3-202ENST00000393937 EEA1Q15075 1411 aa22.27■■□□□ 1.16
LOXL3-202ENST00000393937 PELP1Q8IZL8 1130 aaKnown RBP22.25■■□□□ 1.15
LOXL3-202ENST00000393937 SYNJ1O43426 1573 aa22.25■■□□□ 1.15
LOXL3-202ENST00000393937 CSRNP3Q8WYN3 585 aa22.23■■□□□ 1.15
LOXL3-202ENST00000393937 CEP162Q5TB80 1403 aa22.21■■□□□ 1.15
LOXL3-202ENST00000393937 TNIKQ9UKE5 1360 aa22.18■■□□□ 1.14
LOXL3-202ENST00000393937 TTBK1Q5TCY1 1321 aaPredicted RBP22.17■■□□□ 1.14
LOXL3-202ENST00000393937 GOLGA3Q08378 1498 aa22.1■■□□□ 1.13
LOXL3-202ENST00000393937 UBTFP17480 764 aaKnown RBP22.09■■□□□ 1.13
LOXL3-202ENST00000393937 DIEXFQ68CQ4 756 aaKnown RBP22.08■■□□□ 1.13
LOXL3-202ENST00000393937 HMGXB3Q12766 1538 aa22.08■■□□□ 1.12
LOXL3-202ENST00000393937 NCAPD3P42695 1498 aa22.07■■□□□ 1.12
LOXL3-202ENST00000393937 ACIN1Q9UKV3 1341 aaKnown RBP22.07■■□□□ 1.12
LOXL3-202ENST00000393937 NEUROD1Q13562 356 aa22.02■■□□□ 1.12
LOXL3-202ENST00000393937 KIF21BO75037 1637 aa22.01■■□□□ 1.11
LOXL3-202ENST00000393937 CEP164Q9UPV0 1460 aa22.01■■□□□ 1.11
LOXL3-202ENST00000393937 TOP2BQ02880 1626 aa22■■□□□ 1.11
LOXL3-202ENST00000393937 BIVM-ERCC5R4GMW8 1640 aa21.94■■□□□ 1.1
LOXL3-202ENST00000393937 CENPBP07199 599 aaPredicted RBP21.92■■□□□ 1.1
LOXL3-202ENST00000393937 RAPGEF2Q9Y4G8 1499 aa21.89■■□□□ 1.09
LOXL3-202ENST00000393937 GTF3C3Q9Y5Q9 886 aa21.84■■□□□ 1.09
LOXL3-202ENST00000393937 CFTRP13569 1480 aa21.84■■□□□ 1.09
LOXL3-202ENST00000393937 CUX1P39880 1505 aa21.83■■□□□ 1.09
LOXL3-202ENST00000393937 CLIP1P30622 1438 aa21.83■■□□□ 1.09
LOXL3-202ENST00000393937 ZNF316A6NFI3 1004 aaPredicted RBP21.83■■□□□ 1.08
LOXL3-202ENST00000393937 HNRNPUL2Q1KMD3 747 aaKnown RBP21.73■■□□□ 1.07
LOXL3-202ENST00000393937 VPS8Q8N3P4 1428 aa21.73■■□□□ 1.07
LOXL3-202ENST00000393937 PRXQ9BXM0 1461 aa21.72■■□□□ 1.07
LOXL3-202ENST00000393937 ERICH3Q5RHP9 1530 aa21.7■■□□□ 1.06
LOXL3-202ENST00000393937 PRDM2Q13029 1718 aa21.7■■□□□ 1.06
LOXL3-202ENST00000393937 RANGAP1P46060 587 aaPredicted RBP21.67■■□□□ 1.06
LOXL3-202ENST00000393937 KIF27Q86VH2 1401 aa21.64■■□□□ 1.06
LOXL3-202ENST00000393937 CC2D2AQ9P2K1 1620 aa21.63■■□□□ 1.05
LOXL3-202ENST00000393937 APLP2Q06481 763 aa21.63■■□□□ 1.05
LOXL3-202ENST00000393937 CADPSQ9ULU8 1353 aa21.61■■□□□ 1.05
LOXL3-202ENST00000393937 YTHDC1Q96MU7 727 aaKnown RBP21.58■■□□□ 1.05
LOXL3-202ENST00000393937 MIER1Q8N108 512 aa21.55■■□□□ 1.04
LOXL3-202ENST00000393937 ARAP1Q96P48 1450 aa21.54■■□□□ 1.04
LOXL3-202ENST00000393937 CUX2O14529 1486 aa21.48■■□□□ 1.03
LOXL3-202ENST00000393937 FGD5Q6ZNL6 1462 aa21.46■■□□□ 1.03
LOXL3-202ENST00000393937 IGF1RP08069 1367 aa21.43■■□□□ 1.02
LOXL3-202ENST00000393937 FANCD2Q9BXW9 1451 aa21.41■■□□□ 1.02
LOXL3-202ENST00000393937 ARHGAP35Q9NRY4 1499 aa21.39■■□□□ 1.02
LOXL3-202ENST00000393937 KANK4Q5T7N3 995 aaPredicted RBP21.34■■□□□ 1.01
LOXL3-202ENST00000393937 CLSPNQ9HAW4 1339 aa21.34■■□□□ 1.01
LOXL3-202ENST00000393937 NESP48681 1621 aa21.33■■□□□ 1.01
LOXL3-202ENST00000393937 CARMIL1Q5VZK9 1371 aa21.32■■□□□ 1
LOXL3-202ENST00000393937 DHX57Q6P158 1386 aaKnown RBP21.3■■□□□ 1
LOXL3-202ENST00000393937 DNMBPQ6XZF7 1577 aa21.29■■□□□ 1
LOXL3-202ENST00000393937 TOPBP1Q92547 1522 aa21.26■□□□□ 0.99
LOXL3-202ENST00000393937 RAD54L2Q9Y4B4 1467 aa21.26■□□□□ 0.99
LOXL3-202ENST00000393937 POLA1P09884 1462 aaPredicted RBP21.24■□□□□ 0.99
LOXL3-202ENST00000393937 ABCA10Q8WWZ4 1543 aa21.22■□□□□ 0.99
LOXL3-202ENST00000393937 RRBP1Q9P2E9 1410 aaKnown RBP21.2■□□□□ 0.98
LOXL3-202ENST00000393937 MYT1Q01538 1121 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms