RNA–Protein interactions for RNA: ENST00000416232.5

AC004890.2-205, humanhuman

TSL 2 BASIC

Gene AC004890.2, Length 2,804 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004890.2-205ENST00000416232 NISCHQ9Y2I1 1504 aa28.95■■■□□ 2.23
AC004890.2-205ENST00000416232 SHROOM4Q9ULL8 1493 aa25.62■■□□□ 1.69
AC004890.2-205ENST00000416232 SUPT5HO00267 1087 aaKnown RBP25.27■■□□□ 1.64
AC004890.2-205ENST00000416232 DCAF8L2P0C7V8 631 aa24.65■■□□□ 1.54
AC004890.2-205ENST00000416232 MYO15BQ96JP2 1530 aa24.53■■□□□ 1.52
AC004890.2-205ENST00000416232 ZCCHC6Q5VYS8 1495 aaKnown RBP24.51■■□□□ 1.51
AC004890.2-205ENST00000416232 CHIC1Q5VXU3 224 aa24.47■■□□□ 1.51
AC004890.2-205ENST00000416232 PCGF6Q9BYE7 350 aa24.32■■□□□ 1.48
AC004890.2-205ENST00000416232 HRCP23327 699 aa24.31■■□□□ 1.48
AC004890.2-205ENST00000416232 PPARGC1BQ86YN6 1023 aaKnown RBP24.14■■□□□ 1.46
AC004890.2-205ENST00000416232 CCDC180Q9P1Z9 1646 aa24.14■■□□□ 1.46
AC004890.2-205ENST00000416232 LOC105371045A0A1W2PR82 267 aa24.03■■□□□ 1.44
AC004890.2-205ENST00000416232 DCAF1Q9Y4B6 1507 aa23.58■■□□□ 1.37
AC004890.2-205ENST00000416232 EHMT2Q96KQ7 1210 aa23.51■■□□□ 1.35
AC004890.2-205ENST00000416232 TRIM26Q12899 539 aaPredicted RBP23.46■■□□□ 1.35
AC004890.2-205ENST00000416232 FAM9AQ8IZU1 332 aaPredicted RBP23.45■■□□□ 1.34
AC004890.2-205ENST00000416232 TRIM41Q8WV44 630 aa23.29■■□□□ 1.32
AC004890.2-205ENST00000416232 SCRIBQ14160 1630 aa23.21■■□□□ 1.31
AC004890.2-205ENST00000416232 ABCC9O60706 1549 aa23.19■■□□□ 1.3
AC004890.2-205ENST00000416232 RSF1Q96T23 1441 aaPredicted RBP23.19■■□□□ 1.3
AC004890.2-205ENST00000416232 RB1CC1Q8TDY2 1594 aa23.07■■□□□ 1.28
AC004890.2-205ENST00000416232 ZEB1P37275 1124 aaPredicted RBP22.92■■□□□ 1.26
AC004890.2-205ENST00000416232 CECR2Q9BXF3 1484 aa22.83■■□□□ 1.25
AC004890.2-205ENST00000416232 TTBK1Q5TCY1 1321 aaPredicted RBP22.79■■□□□ 1.24
AC004890.2-205ENST00000416232 SCAF1Q9H7N4 1312 aaKnown RBP22.79■■□□□ 1.24
AC004890.2-205ENST00000416232 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.77■■□□□ 1.24
AC004890.2-205ENST00000416232 MROH2BQ7Z745 1585 aa22.69■■□□□ 1.22
AC004890.2-205ENST00000416232 CCER1Q8TC90 406 aaPredicted RBP22.62■■□□□ 1.21
AC004890.2-205ENST00000416232 WIZO95785 1651 aa22.6■■□□□ 1.21
AC004890.2-205ENST00000416232 NEUROD1Q13562 356 aa22.4■■□□□ 1.18
AC004890.2-205ENST00000416232 ABCC8Q09428 1581 aa22.36■■□□□ 1.17
AC004890.2-205ENST00000416232 NACADO15069 1562 aa22.35■■□□□ 1.17
AC004890.2-205ENST00000416232 ACIN1Q9UKV3 1341 aaKnown RBP22.31■■□□□ 1.16
AC004890.2-205ENST00000416232 DIEXFQ68CQ4 756 aaKnown RBP22.31■■□□□ 1.16
AC004890.2-205ENST00000416232 PELP1Q8IZL8 1130 aaKnown RBP22.3■■□□□ 1.16
AC004890.2-205ENST00000416232 CCDC88BA6NC98 1476 aa22.3■■□□□ 1.16
AC004890.2-205ENST00000416232 BAZ1AQ9NRL2 1556 aaPredicted RBP22.25■■□□□ 1.15
AC004890.2-205ENST00000416232 SOGA1O94964 1423 aa22.23■■□□□ 1.15
AC004890.2-205ENST00000416232 UBTFP17480 764 aaKnown RBP22.22■■□□□ 1.15
AC004890.2-205ENST00000416232 GTF3C3Q9Y5Q9 886 aa22.22■■□□□ 1.15
AC004890.2-205ENST00000416232 EIF4G1Q04637 1599 aaKnown RBP22.2■■□□□ 1.14
AC004890.2-205ENST00000416232 CEP162Q5TB80 1403 aa22.2■■□□□ 1.14
AC004890.2-205ENST00000416232 RUSC2Q8N2Y8 1516 aa22.15■■□□□ 1.14
AC004890.2-205ENST00000416232 YTHDC1Q96MU7 727 aaKnown RBP22.12■■□□□ 1.13
AC004890.2-205ENST00000416232 CSRNP3Q8WYN3 585 aa22.06■■□□□ 1.12
AC004890.2-205ENST00000416232 CENPBP07199 599 aaPredicted RBP22.06■■□□□ 1.12
AC004890.2-205ENST00000416232 HNRNPUL2Q1KMD3 747 aaKnown RBP22.06■■□□□ 1.12
AC004890.2-205ENST00000416232 RANGAP1P46060 587 aaPredicted RBP22.05■■□□□ 1.12
AC004890.2-205ENST00000416232 TOP2AP11388 1531 aaKnown RBP22.03■■□□□ 1.12
AC004890.2-205ENST00000416232 WRNQ14191 1432 aaPredicted RBP eCLIP22.02■■□□□ 1.12
AC004890.2-205ENST00000416232 SMARCA2P51531 1590 aa22.01■■□□□ 1.11
AC004890.2-205ENST00000416232 PABPN1Q86U42 306 aaKnown RBP eCLIP21.99■■□□□ 1.11
AC004890.2-205ENST00000416232 TNIKQ9UKE5 1360 aa21.99■■□□□ 1.11
AC004890.2-205ENST00000416232 SMARCA4P51532 1647 aa21.97■■□□□ 1.11
AC004890.2-205ENST00000416232 ZNF316A6NFI3 1004 aaPredicted RBP21.96■■□□□ 1.11
AC004890.2-205ENST00000416232 MIER1Q8N108 512 aa21.86■■□□□ 1.09
AC004890.2-205ENST00000416232 GOLGA3Q08378 1498 aa21.81■■□□□ 1.08
AC004890.2-205ENST00000416232 UNC13AQ9UPW8 1703 aa21.75■■□□□ 1.07
AC004890.2-205ENST00000416232 EEA1Q15075 1411 aa21.75■■□□□ 1.07
AC004890.2-205ENST00000416232 CLIP1P30622 1438 aa21.71■■□□□ 1.07
AC004890.2-205ENST00000416232 APLP2Q06481 763 aa21.69■■□□□ 1.06
AC004890.2-205ENST00000416232 SYNJ1O43426 1573 aa21.66■■□□□ 1.06
AC004890.2-205ENST00000416232 CEP164Q9UPV0 1460 aa21.62■■□□□ 1.05
AC004890.2-205ENST00000416232 RAPGEF2Q9Y4G8 1499 aa21.61■■□□□ 1.05
AC004890.2-205ENST00000416232 VPS8Q8N3P4 1428 aa21.56■■□□□ 1.04
AC004890.2-205ENST00000416232 BICRAQ9NZM4 1560 aa21.49■■□□□ 1.03
AC004890.2-205ENST00000416232 KIF21BO75037 1637 aa21.47■■□□□ 1.03
AC004890.2-205ENST00000416232 KANK4Q5T7N3 995 aaPredicted RBP21.45■■□□□ 1.02
AC004890.2-205ENST00000416232 ITGAEP38570 1179 aa21.43■■□□□ 1.02
AC004890.2-205ENST00000416232 BAZ1BQ9UIG0 1483 aaKnown RBP21.39■■□□□ 1.01
AC004890.2-205ENST00000416232 ATAD2BQ9ULI0 1458 aa21.38■■□□□ 1.01
AC004890.2-205ENST00000416232 DHX57Q6P158 1386 aaKnown RBP21.36■■□□□ 1.01
AC004890.2-205ENST00000416232 PEG3Q9GZU2 1588 aa21.31■■□□□ 1
AC004890.2-205ENST00000416232 ARAP1Q96P48 1450 aa21.25■□□□□ 0.99
AC004890.2-205ENST00000416232 KCNH8Q96L42 1107 aa21.24■□□□□ 0.99
AC004890.2-205ENST00000416232 SUPT16HQ9Y5B9 1047 aaKnown RBP21.22■□□□□ 0.99
AC004890.2-205ENST00000416232 TOP2BQ02880 1626 aa21.19■□□□□ 0.98
AC004890.2-205ENST00000416232 PRXQ9BXM0 1461 aa21.15■□□□□ 0.98
AC004890.2-205ENST00000416232 MYT1Q01538 1121 aa21.13■□□□□ 0.97
AC004890.2-205ENST00000416232 CLSPNQ9HAW4 1339 aa21.11■□□□□ 0.97
AC004890.2-205ENST00000416232 BCANQ96GW7 911 aa21.09■□□□□ 0.97
AC004890.2-205ENST00000416232 CCNB3Q8WWL7 1395 aa21.08■□□□□ 0.97
AC004890.2-205ENST00000416232 CUX1P39880 1505 aa21.06■□□□□ 0.96
AC004890.2-205ENST00000416232 HIRIP3Q9BW71 556 aaPredicted RBP21.05■□□□□ 0.96
AC004890.2-205ENST00000416232 RRBP1Q9P2E9 1410 aaKnown RBP21.04■□□□□ 0.96
AC004890.2-205ENST00000416232 ATP1B4Q9UN42 357 aaPredicted RBP21.04■□□□□ 0.96
AC004890.2-205ENST00000416232 ERICH3Q5RHP9 1530 aa21.04■□□□□ 0.96
AC004890.2-205ENST00000416232 BIVM-ERCC5R4GMW8 1640 aa21.03■□□□□ 0.96
AC004890.2-205ENST00000416232 SIN3AQ96ST3 1273 aa21.03■□□□□ 0.96
AC004890.2-205ENST00000416232 P3H3Q8IVL6 736 aa21.02■□□□□ 0.96
AC004890.2-205ENST00000416232 ARHGAP35Q9NRY4 1499 aa21.02■□□□□ 0.96
AC004890.2-205ENST00000416232 KIF27Q86VH2 1401 aa21.02■□□□□ 0.96
AC004890.2-205ENST00000416232 RAB3GAP2Q9H2M9 1393 aa21.02■□□□□ 0.96
AC004890.2-205ENST00000416232 DDX10Q13206 875 aaKnown RBP21■□□□□ 0.95
AC004890.2-205ENST00000416232 FAM50AQ14320 339 aaKnown RBP21■□□□□ 0.95
AC004890.2-205ENST00000416232 TSHZ2Q9NRE2 1034 aa20.97■□□□□ 0.95
AC004890.2-205ENST00000416232 MAPKBP1O60336 1514 aa20.89■□□□□ 0.94
AC004890.2-205ENST00000416232 FKBP8Q14318 412 aa20.87■□□□□ 0.93
AC004890.2-205ENST00000416232 CUX2O14529 1486 aa20.87■□□□□ 0.93
AC004890.2-205ENST00000416232 PHLDB1Q86UU1 1377 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms