RNA–Protein interactions for RNA: ENST00000262809.8

ELL-201, Transcript of elongation factor for RNA polymerase II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ELL, Length 4,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL-201ENST00000262809 NISCHQ9Y2I1 1504 aa30.7■■■□□ 2.51
ELL-201ENST00000262809 DCAF8L2P0C7V8 631 aa27.92■■■□□ 2.06
ELL-201ENST00000262809 SHROOM4Q9ULL8 1493 aa27.16■■□□□ 1.94
ELL-201ENST00000262809 SUPT5HO00267 1087 aaKnown RBP26.46■■□□□ 1.83
ELL-201ENST00000262809 ABCC9O60706 1549 aa26.12■■□□□ 1.77
ELL-201ENST00000262809 CCDC180Q9P1Z9 1646 aa25.82■■□□□ 1.72
ELL-201ENST00000262809 ZCCHC6Q5VYS8 1495 aaKnown RBP25.62■■□□□ 1.69
ELL-201ENST00000262809 PABPN1Q86U42 306 aaKnown RBP eCLIP25.3■■□□□ 1.64
ELL-201ENST00000262809 SCRIBQ14160 1630 aa25.1■■□□□ 1.61
ELL-201ENST00000262809 EHMT2Q96KQ7 1210 aa25.05■■□□□ 1.6
ELL-201ENST00000262809 FAM9AQ8IZU1 332 aaPredicted RBP24.73■■□□□ 1.55
ELL-201ENST00000262809 DCAF1Q9Y4B6 1507 aa24.56■■□□□ 1.52
ELL-201ENST00000262809 NACADO15069 1562 aa24.5■■□□□ 1.51
ELL-201ENST00000262809 CHIC1Q5VXU3 224 aa24.5■■□□□ 1.51
ELL-201ENST00000262809 RB1CC1Q8TDY2 1594 aa24.49■■□□□ 1.51
ELL-201ENST00000262809 CECR2Q9BXF3 1484 aa24.39■■□□□ 1.5
ELL-201ENST00000262809 TRIM41Q8WV44 630 aa24.39■■□□□ 1.49
ELL-201ENST00000262809 LOC105371045A0A1W2PR82 267 aa24.25■■□□□ 1.47
ELL-201ENST00000262809 RSF1Q96T23 1441 aaPredicted RBP24.24■■□□□ 1.47
ELL-201ENST00000262809 MYO15BQ96JP2 1530 aa24.04■■□□□ 1.44
ELL-201ENST00000262809 MROH2BQ7Z745 1585 aa24.03■■□□□ 1.44
ELL-201ENST00000262809 RANGAP1P46060 587 aaPredicted RBP24.02■■□□□ 1.44
ELL-201ENST00000262809 TTBK1Q5TCY1 1321 aaPredicted RBP23.92■■□□□ 1.42
ELL-201ENST00000262809 PPARGC1BQ86YN6 1023 aaKnown RBP23.8■■□□□ 1.4
ELL-201ENST00000262809 WIZO95785 1651 aa23.78■■□□□ 1.4
ELL-201ENST00000262809 BAZ1AQ9NRL2 1556 aaPredicted RBP23.68■■□□□ 1.38
ELL-201ENST00000262809 UBTFP17480 764 aaKnown RBP23.65■■□□□ 1.38
ELL-201ENST00000262809 PCGF6Q9BYE7 350 aa23.61■■□□□ 1.37
ELL-201ENST00000262809 BICRAQ9NZM4 1560 aa23.5■■□□□ 1.35
ELL-201ENST00000262809 UNC13AQ9UPW8 1703 aa23.48■■□□□ 1.35
ELL-201ENST00000262809 BAZ1BQ9UIG0 1483 aaKnown RBP23.47■■□□□ 1.35
ELL-201ENST00000262809 SMARCA4P51532 1647 aa23.44■■□□□ 1.34
ELL-201ENST00000262809 CCDC88BA6NC98 1476 aa23.44■■□□□ 1.34
ELL-201ENST00000262809 ATAD2BQ9ULI0 1458 aa23.32■■□□□ 1.32
ELL-201ENST00000262809 ABCC8Q09428 1581 aa23.29■■□□□ 1.32
ELL-201ENST00000262809 DNAJC5BQ9UF47 199 aa23.29■■□□□ 1.32
ELL-201ENST00000262809 ATP1B4Q9UN42 357 aaPredicted RBP23.2■■□□□ 1.3
ELL-201ENST00000262809 TOP2AP11388 1531 aaKnown RBP23.19■■□□□ 1.3
ELL-201ENST00000262809 CSRNP3Q8WYN3 585 aa23.15■■□□□ 1.3
ELL-201ENST00000262809 EIF4G1Q04637 1599 aaKnown RBP23.13■■□□□ 1.29
ELL-201ENST00000262809 SMARCA2P51531 1590 aa23.07■■□□□ 1.28
ELL-201ENST00000262809 SOGA1O94964 1423 aa23.06■■□□□ 1.28
ELL-201ENST00000262809 WRNQ14191 1432 aaPredicted RBP eCLIP23.06■■□□□ 1.28
ELL-201ENST00000262809 APLP2Q06481 763 aa23.05■■□□□ 1.28
ELL-201ENST00000262809 P3H3Q8IVL6 736 aa22.93■■□□□ 1.26
ELL-201ENST00000262809 RUSC2Q8N2Y8 1516 aa22.91■■□□□ 1.26
ELL-201ENST00000262809 CC2D2AQ9P2K1 1620 aa22.83■■□□□ 1.25
ELL-201ENST00000262809 FBLN2P98095 1184 aa22.83■■□□□ 1.24
ELL-201ENST00000262809 NCAPD3P42695 1498 aa22.82■■□□□ 1.24
ELL-201ENST00000262809 TRIM26Q12899 539 aaPredicted RBP22.8■■□□□ 1.24
ELL-201ENST00000262809 NESP48681 1621 aa22.76■■□□□ 1.23
ELL-201ENST00000262809 CADPSQ9ULU8 1353 aa22.74■■□□□ 1.23
ELL-201ENST00000262809 ARID3CA6NKF2 412 aa22.73■■□□□ 1.23
ELL-201ENST00000262809 ITGAEP38570 1179 aa22.73■■□□□ 1.23
ELL-201ENST00000262809 HNRNPUL2Q1KMD3 747 aaKnown RBP22.7■■□□□ 1.22
ELL-201ENST00000262809 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.57■■□□□ 1.2
ELL-201ENST00000262809 CCER1Q8TC90 406 aaPredicted RBP22.56■■□□□ 1.2
ELL-201ENST00000262809 TDRD9Q8NDG6 1382 aaKnown RBP22.56■■□□□ 1.2
ELL-201ENST00000262809 CUX2O14529 1486 aa22.55■■□□□ 1.2
ELL-201ENST00000262809 SYNJ1O43426 1573 aa22.54■■□□□ 1.2
ELL-201ENST00000262809 CEP162Q5TB80 1403 aa22.54■■□□□ 1.2
ELL-201ENST00000262809 FANCD2Q9BXW9 1451 aa22.52■■□□□ 1.2
ELL-201ENST00000262809 PEG3Q9GZU2 1588 aa22.52■■□□□ 1.2
ELL-201ENST00000262809 HMGXB3Q12766 1538 aa22.48■■□□□ 1.19
ELL-201ENST00000262809 KIF27Q86VH2 1401 aa22.47■■□□□ 1.19
ELL-201ENST00000262809 ERCC6Q03468 1493 aa22.46■■□□□ 1.19
ELL-201ENST00000262809 CFTRP13569 1480 aa22.46■■□□□ 1.19
ELL-201ENST00000262809 GOLGA3Q08378 1498 aa22.43■■□□□ 1.18
ELL-201ENST00000262809 RAD54L2Q9Y4B4 1467 aa22.43■■□□□ 1.18
ELL-201ENST00000262809 CLIP1P30622 1438 aa22.43■■□□□ 1.18
ELL-201ENST00000262809 RAPGEF2Q9Y4G8 1499 aa22.41■■□□□ 1.18
ELL-201ENST00000262809 HRCP23327 699 aa22.37■■□□□ 1.17
ELL-201ENST00000262809 EEA1Q15075 1411 aa22.37■■□□□ 1.17
ELL-201ENST00000262809 PDS5BQ9NTI5 1447 aa22.36■■□□□ 1.17
ELL-201ENST00000262809 TNIKQ9UKE5 1360 aa22.36■■□□□ 1.17
ELL-201ENST00000262809 CUX1P39880 1505 aa22.34■■□□□ 1.17
ELL-201ENST00000262809 CEP164Q9UPV0 1460 aa22.34■■□□□ 1.17
ELL-201ENST00000262809 FGD5Q6ZNL6 1462 aa22.33■■□□□ 1.17
ELL-201ENST00000262809 CARMIL1Q5VZK9 1371 aa22.33■■□□□ 1.16
ELL-201ENST00000262809 FAM50AQ14320 339 aaKnown RBP22.28■■□□□ 1.16
ELL-201ENST00000262809 CHMP7Q8WUX9 453 aaPredicted RBP22.26■■□□□ 1.15
ELL-201ENST00000262809 IGF1RP08069 1367 aa22.19■■□□□ 1.14
ELL-201ENST00000262809 KANK4Q5T7N3 995 aaPredicted RBP22.14■■□□□ 1.14
ELL-201ENST00000262809 AQRO60306 1485 aaKnown RBP eCLIP22.14■■□□□ 1.131e-6■■■■■ 28.1
ELL-201ENST00000262809 TOP2BQ02880 1626 aa22.12■■□□□ 1.13
ELL-201ENST00000262809 TOPBP1Q92547 1522 aa22.09■■□□□ 1.13
ELL-201ENST00000262809 POLA1P09884 1462 aaPredicted RBP22.08■■□□□ 1.13
ELL-201ENST00000262809 URB2Q14146 1524 aaKnown RBP22■■□□□ 1.11
ELL-201ENST00000262809 FHOD3Q2V2M9 1422 aa21.97■■□□□ 1.11
ELL-201ENST00000262809 GAPVD1Q14C86 1478 aa21.94■■□□□ 1.1
ELL-201ENST00000262809 ZNF777Q9ULD5 760 aaPredicted RBP21.94■■□□□ 1.1
ELL-201ENST00000262809 VPS8Q8N3P4 1428 aa21.92■■□□□ 1.1
ELL-201ENST00000262809 CHIC2Q9UKJ5 165 aa21.9■■□□□ 1.1
ELL-201ENST00000262809 ZEB1P37275 1124 aaPredicted RBP21.88■■□□□ 1.09
ELL-201ENST00000262809 PRXQ9BXM0 1461 aa21.88■■□□□ 1.09
ELL-201ENST00000262809 LAMC3Q9Y6N6 1575 aa21.87■■□□□ 1.09
ELL-201ENST00000262809 DNMBPQ6XZF7 1577 aa21.85■■□□□ 1.09
ELL-201ENST00000262809 ZNF608Q9ULD9 1512 aaPredicted RBP21.84■■□□□ 1.09
ELL-201ENST00000262809 NEUROD1Q13562 356 aa21.83■■□□□ 1.08
ELL-201ENST00000262809 MTUS2Q5JR59 1369 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 887 ms