RNA–Protein interactions for RNA: ENST00000369600.5

PHTF1-203, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 5 BASIC

Gene PHTF1, Length 3,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-203ENST00000369600 NISCHQ9Y2I1 1504 aa27.91■■■□□ 2.06
PHTF1-203ENST00000369600 SHROOM4Q9ULL8 1493 aa24.91■■□□□ 1.58
PHTF1-203ENST00000369600 SUPT5HO00267 1087 aaKnown RBP24.65■■□□□ 1.54
PHTF1-203ENST00000369600 DCAF8L2P0C7V8 631 aa23.98■■□□□ 1.43
PHTF1-203ENST00000369600 HRCP23327 699 aa23.85■■□□□ 1.41
PHTF1-203ENST00000369600 PCGF6Q9BYE7 350 aa23.85■■□□□ 1.41
PHTF1-203ENST00000369600 CHIC1Q5VXU3 224 aa23.82■■□□□ 1.4
PHTF1-203ENST00000369600 MYO15BQ96JP2 1530 aa23.82■■□□□ 1.4
PHTF1-203ENST00000369600 PPARGC1BQ86YN6 1023 aaKnown RBP23.66■■□□□ 1.38
PHTF1-203ENST00000369600 ZCCHC6Q5VYS8 1495 aaKnown RBP23.62■■□□□ 1.37
PHTF1-203ENST00000369600 CCDC180Q9P1Z9 1646 aa23.45■■□□□ 1.34
PHTF1-203ENST00000369600 LOC105371045A0A1W2PR82 267 aa23.42■■□□□ 1.34
PHTF1-203ENST00000369600 DCAF1Q9Y4B6 1507 aa22.99■■□□□ 1.27
PHTF1-203ENST00000369600 EHMT2Q96KQ7 1210 aa22.98■■□□□ 1.27
PHTF1-203ENST00000369600 TRIM26Q12899 539 aaPredicted RBP22.97■■□□□ 1.27
PHTF1-203ENST00000369600 FAM9AQ8IZU1 332 aaPredicted RBP22.89■■□□□ 1.26
PHTF1-203ENST00000369600 TRIM41Q8WV44 630 aa22.71■■□□□ 1.23
PHTF1-203ENST00000369600 ZEB1P37275 1124 aaPredicted RBP22.54■■□□□ 1.2
PHTF1-203ENST00000369600 SCAF1Q9H7N4 1312 aaKnown RBP22.4■■□□□ 1.18
PHTF1-203ENST00000369600 RSF1Q96T23 1441 aaPredicted RBP22.39■■□□□ 1.18
PHTF1-203ENST00000369600 SCRIBQ14160 1630 aa22.38■■□□□ 1.17
PHTF1-203ENST00000369600 ABCC9O60706 1549 aa22.36■■□□□ 1.17
PHTF1-203ENST00000369600 TTBK1Q5TCY1 1321 aaPredicted RBP22.3■■□□□ 1.16
PHTF1-203ENST00000369600 RB1CC1Q8TDY2 1594 aa22.29■■□□□ 1.16
PHTF1-203ENST00000369600 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.28■■□□□ 1.16
PHTF1-203ENST00000369600 CCER1Q8TC90 406 aaPredicted RBP22.2■■□□□ 1.14
PHTF1-203ENST00000369600 PELP1Q8IZL8 1130 aaKnown RBP22.18■■□□□ 1.14
PHTF1-203ENST00000369600 CECR2Q9BXF3 1484 aa22■■□□□ 1.11
PHTF1-203ENST00000369600 NEUROD1Q13562 356 aa22■■□□□ 1.11
PHTF1-203ENST00000369600 ACIN1Q9UKV3 1341 aaKnown RBP21.95■■□□□ 1.1
PHTF1-203ENST00000369600 DIEXFQ68CQ4 756 aaKnown RBP21.92■■□□□ 1.1
PHTF1-203ENST00000369600 GTF3C3Q9Y5Q9 886 aa21.88■■□□□ 1.09
PHTF1-203ENST00000369600 MROH2BQ7Z745 1585 aa21.87■■□□□ 1.09
PHTF1-203ENST00000369600 NACADO15069 1562 aa21.81■■□□□ 1.08
PHTF1-203ENST00000369600 WIZO95785 1651 aa21.79■■□□□ 1.08
PHTF1-203ENST00000369600 CENPBP07199 599 aaPredicted RBP21.79■■□□□ 1.08
PHTF1-203ENST00000369600 YTHDC1Q96MU7 727 aaKnown RBP21.78■■□□□ 1.08
PHTF1-203ENST00000369600 UBTFP17480 764 aaKnown RBP21.69■■□□□ 1.06
PHTF1-203ENST00000369600 ABCC8Q09428 1581 aa21.62■■□□□ 1.05
PHTF1-203ENST00000369600 CCDC88BA6NC98 1476 aa21.57■■□□□ 1.04
PHTF1-203ENST00000369600 CEP162Q5TB80 1403 aa21.57■■□□□ 1.04
PHTF1-203ENST00000369600 HNRNPUL2Q1KMD3 747 aaKnown RBP21.56■■□□□ 1.04
PHTF1-203ENST00000369600 SOGA1O94964 1423 aa21.52■■□□□ 1.04
PHTF1-203ENST00000369600 ZNF316A6NFI3 1004 aaPredicted RBP21.52■■□□□ 1.04
PHTF1-203ENST00000369600 RANGAP1P46060 587 aaPredicted RBP21.52■■□□□ 1.03
PHTF1-203ENST00000369600 BAZ1AQ9NRL2 1556 aaPredicted RBP21.46■■□□□ 1.03
PHTF1-203ENST00000369600 CSRNP3Q8WYN3 585 aa21.44■■□□□ 1.02
PHTF1-203ENST00000369600 MIER1Q8N108 512 aa21.41■■□□□ 1.02
PHTF1-203ENST00000369600 RUSC2Q8N2Y8 1516 aa21.41■■□□□ 1.02
PHTF1-203ENST00000369600 EIF4G1Q04637 1599 aaKnown RBP21.39■■□□□ 1.01
PHTF1-203ENST00000369600 WRNQ14191 1432 aaPredicted RBP eCLIP21.38■■□□□ 1.01
PHTF1-203ENST00000369600 TNIKQ9UKE5 1360 aa21.35■■□□□ 1.01
PHTF1-203ENST00000369600 APLP2Q06481 763 aa21.25■□□□□ 0.99
PHTF1-203ENST00000369600 TOP2AP11388 1531 aaKnown RBP21.25■□□□□ 0.99
PHTF1-203ENST00000369600 PABPN1Q86U42 306 aaKnown RBP eCLIP21.21■□□□□ 0.99
PHTF1-203ENST00000369600 SMARCA2P51531 1590 aa21.21■□□□□ 0.99
PHTF1-203ENST00000369600 GOLGA3Q08378 1498 aa21.18■□□□□ 0.98
PHTF1-203ENST00000369600 UNC13AQ9UPW8 1703 aa21.17■□□□□ 0.98
PHTF1-203ENST00000369600 SMARCA4P51532 1647 aa21.15■□□□□ 0.98
PHTF1-203ENST00000369600 EEA1Q15075 1411 aa21.11■□□□□ 0.97
PHTF1-203ENST00000369600 CLIP1P30622 1438 aa21.09■□□□□ 0.97
PHTF1-203ENST00000369600 MYT1Q01538 1121 aa21.09■□□□□ 0.97
PHTF1-203ENST00000369600 BICRAQ9NZM4 1560 aa20.98■□□□□ 0.95
PHTF1-203ENST00000369600 CEP164Q9UPV0 1460 aa20.98■□□□□ 0.95
PHTF1-203ENST00000369600 ITGAEP38570 1179 aa20.95■□□□□ 0.94
PHTF1-203ENST00000369600 VPS8Q8N3P4 1428 aa20.93■□□□□ 0.94
PHTF1-203ENST00000369600 RAPGEF2Q9Y4G8 1499 aa20.91■□□□□ 0.94
PHTF1-203ENST00000369600 SYNJ1O43426 1573 aa20.89■□□□□ 0.94
PHTF1-203ENST00000369600 SUPT16HQ9Y5B9 1047 aaKnown RBP20.84■□□□□ 0.93
PHTF1-203ENST00000369600 KANK4Q5T7N3 995 aaPredicted RBP20.82■□□□□ 0.92
PHTF1-203ENST00000369600 DHX57Q6P158 1386 aaKnown RBP20.78■□□□□ 0.92
PHTF1-203ENST00000369600 KIF21BO75037 1637 aa20.78■□□□□ 0.92
PHTF1-203ENST00000369600 BCANQ96GW7 911 aa20.76■□□□□ 0.91
PHTF1-203ENST00000369600 KCNH8Q96L42 1107 aa20.74■□□□□ 0.91
PHTF1-203ENST00000369600 BAZ1BQ9UIG0 1483 aaKnown RBP20.67■□□□□ 0.9
PHTF1-203ENST00000369600 CLSPNQ9HAW4 1339 aa20.61■□□□□ 0.89
PHTF1-203ENST00000369600 TSHZ2Q9NRE2 1034 aa20.61■□□□□ 0.89
PHTF1-203ENST00000369600 ATAD2BQ9ULI0 1458 aa20.58■□□□□ 0.88
PHTF1-203ENST00000369600 HIRIP3Q9BW71 556 aaPredicted RBP20.57■□□□□ 0.88
PHTF1-203ENST00000369600 PEG3Q9GZU2 1588 aa20.57■□□□□ 0.88
PHTF1-203ENST00000369600 DDX10Q13206 875 aaKnown RBP20.57■□□□□ 0.88
PHTF1-203ENST00000369600 ARAP1Q96P48 1450 aa20.56■□□□□ 0.88
PHTF1-203ENST00000369600 ATP1B4Q9UN42 357 aaPredicted RBP20.55■□□□□ 0.88
PHTF1-203ENST00000369600 FKBP8Q14318 412 aa20.52■□□□□ 0.88
PHTF1-203ENST00000369600 CCNB3Q8WWL7 1395 aa20.51■□□□□ 0.87
PHTF1-203ENST00000369600 FAM50AQ14320 339 aaKnown RBP20.5■□□□□ 0.87
PHTF1-203ENST00000369600 SIN3AQ96ST3 1273 aa20.5■□□□□ 0.87
PHTF1-203ENST00000369600 RAB3GAP2Q9H2M9 1393 aa20.45■□□□□ 0.86
PHTF1-203ENST00000369600 TRIM52Q96A61 297 aa20.45■□□□□ 0.86
PHTF1-203ENST00000369600 TOP2BQ02880 1626 aa20.44■□□□□ 0.86
PHTF1-203ENST00000369600 P3H3Q8IVL6 736 aa20.43■□□□□ 0.86
PHTF1-203ENST00000369600 PRXQ9BXM0 1461 aa20.43■□□□□ 0.86
PHTF1-203ENST00000369600 RRBP1Q9P2E9 1410 aaKnown RBP20.42■□□□□ 0.86
PHTF1-203ENST00000369600 ANP32EQ9BTT0 268 aa20.4■□□□□ 0.86
PHTF1-203ENST00000369600 KIF27Q86VH2 1401 aa20.37■□□□□ 0.85
PHTF1-203ENST00000369600 NEFLP07196 543 aa20.37■□□□□ 0.85
PHTF1-203ENST00000369600 ERICH3Q5RHP9 1530 aa20.35■□□□□ 0.85
PHTF1-203ENST00000369600 ARHGAP35Q9NRY4 1499 aa20.34■□□□□ 0.85
PHTF1-203ENST00000369600 CUX1P39880 1505 aa20.28■□□□□ 0.84
PHTF1-203ENST00000369600 WDR97A6NE52 1622 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms