Protein–RNA interactions for Protein: Q06787

FMR1, Synaptic functional regulator FMR1, humanhuman

Known RBP eCLIP

Length 632 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1Q06787 AARS-201ENST00000261772 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.242e-9■■■■□ 26.2
FMR1Q06787 PRPF8-213ENST00000576407 566 ntTSL 210.13□□□□□ -0.792e-8■■■■□ 26.2
FMR1Q06787 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.121e-6■■■■□ 26.2
FMR1Q06787 RNF213-215ENST00000573038 699 ntTSL 316.87■□□□□ 0.292e-6■■■■□ 26.2
FMR1Q06787 EIF4G1-233ENST00000475721 1271 ntTSL 225.23■■□□□ 1.631e-9■■■■□ 26.1
FMR1Q06787 MCM2-207ENST00000477668 2510 ntTSL 222.11■■□□□ 1.134e-7■■■■□ 26.1
FMR1Q06787 XPO6-223ENST00000574435 765 ntTSL 518.87■□□□□ 0.611e-7■■■■□ 26.1
FMR1Q06787 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.53e-6■■■■□ 26.1
FMR1Q06787 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.023e-6■■■■□ 26.1
FMR1Q06787 CAST-233ENST00000510756 2310 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.233e-6■■■■□ 26.1
FMR1Q06787 CAST-206ENST00000395812 4506 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.243e-6■■■■□ 26.1
FMR1Q06787 CAST-239ENST00000513666 1539 ntTSL 212.16□□□□□ -0.463e-6■■■■□ 26.1
FMR1Q06787 CAST-230ENST00000510156 2079 ntAPPRIS ALT2 TSL 510.97□□□□□ -0.653e-6■■■■□ 26.1
FMR1Q06787 CAST-213ENST00000504465 2336 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.753e-6■■■■□ 26.1
FMR1Q06787 CAST-244ENST00000515663 1473 ntTSL 2 BASIC9.99□□□□□ -0.813e-6■■■■□ 26.1
FMR1Q06787 CAST-236ENST00000511782 2466 ntAPPRIS ALT2 TSL 2 BASIC9.5□□□□□ -0.893e-6■■■■□ 26.1
FMR1Q06787 CAST-205ENST00000348386 2272 ntTSL 1 (best)9.07□□□□□ -0.963e-6■■■■□ 26.1
FMR1Q06787 CAST-210ENST00000484552 1767 ntTSL 1 (best)8.94□□□□□ -0.983e-6■■■■□ 26.1
FMR1Q06787 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.023e-6■■■■□ 26.1
FMR1Q06787 CAST-232ENST00000510500 1835 ntTSL 1 (best)8.66□□□□□ -1.023e-6■■■■□ 26.1
FMR1Q06787 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.053e-6■■■■□ 26.1
FMR1Q06787 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.063e-6■■■■□ 26.1
FMR1Q06787 CAST-222ENST00000508579 1758 ntTSL 2 BASIC8.43□□□□□ -1.063e-6■■■■□ 26.1
FMR1Q06787 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.74□□□□□ -1.173e-6■■■■□ 26.1
FMR1Q06787 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.193e-6■■■■□ 26.1
FMR1Q06787 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.463e-6■■■■□ 26.1
FMR1Q06787 CAST-209ENST00000437034 3377 ntTSL 1 (best)5.68□□□□□ -1.53e-6■■■■□ 26.1
FMR1Q06787 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.543e-6■■■■□ 26.1
FMR1Q06787 CDK5RAP2-207ENST00000468989 577 ntTSL 49.72□□□□□ -0.854e-13■■■■□ 26.1
FMR1Q06787 CTNNA1-221ENST00000520339 868 ntTSL 311.95□□□□□ -0.55e-7■■■■□ 26
FMR1Q06787 CTNNA1-241ENST00000524127 483 ntTSL 45.6□□□□□ -1.515e-7■■■■□ 26
FMR1Q06787 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC14.57□□□□□ -0.081e-7■■■■□ 26
FMR1Q06787 HERC2-209ENST00000567869 3523 ntTSL 29.8□□□□□ -0.842e-7■■■■□ 26
FMR1Q06787 PI4KB-209ENST00000460323 595 ntTSL 310.55□□□□□ -0.729e-7■■■■□ 26
FMR1Q06787 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.4■■□□□ 1.342e-6■■■■□ 25.9
FMR1Q06787 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.07■□□□□ 0.162e-6■■■■□ 25.9
FMR1Q06787 ELOA-203ENST00000609199 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.252e-6■■■■□ 25.9
FMR1Q06787 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC20.55■□□□□ 0.888e-7■■■■□ 25.9
FMR1Q06787 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC19.47■□□□□ 0.718e-7■■■■□ 25.9
FMR1Q06787 MDM2-219ENST00000493419 577 ntTSL 217.49■□□□□ 0.398e-7■■■■□ 25.9
FMR1Q06787 MDM2-204ENST00000311420 1583 ntTSL 514.09□□□□□ -0.158e-7■■■■□ 25.9
FMR1Q06787 MDM2-213ENST00000393417 1683 ntTSL 59.99□□□□□ -0.818e-7■■■■□ 25.9
FMR1Q06787 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.958e-7■■■■□ 25.9
FMR1Q06787 CENPF-202ENST00000464322 689 ntTSL 218.99■□□□□ 0.633e-7■■■■□ 25.9
FMR1Q06787 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.28■□□□□ 0.041e-7■■■■□ 25.9
FMR1Q06787 KDM4B-206ENST00000588361 3039 ntTSL 217.53■□□□□ 0.45e-7■■■■□ 25.9
FMR1Q06787 SMARCA4-210ENST00000586892 559 ntTSL 416.44■□□□□ 0.226e-9■■■■□ 25.9
FMR1Q06787 TRIP12-214ENST00000477441 581 ntTSL 37.72□□□□□ -1.173e-6■■■■□ 25.9
FMR1Q06787 XAB2-203ENST00000596134 543 ntTSL 221.27■■□□□ 16e-8■■■■□ 25.8
FMR1Q06787 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.44■□□□□ 0.77e-9■■■■□ 25.8
FMR1Q06787 SMARCC2-215ENST00000552931 608 ntTSL 37.62□□□□□ -1.192e-6■■■■□ 25.8
FMR1Q06787 LTBP4-230ENST00000601464 477 ntTSL 520.1■□□□□ 0.814e-12■■■■□ 25.8
FMR1Q06787 PUS7-204ENST00000481939 2436 ntTSL 519.4■□□□□ 0.72e-6■■■■□ 25.8
FMR1Q06787 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.382e-6■■■■□ 25.8
FMR1Q06787 PUS7-201ENST00000356362 3480 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.452e-6■■■■□ 25.8
FMR1Q06787 CAPN1-220ENST00000530567 1415 ntTSL 225.78■■□□□ 1.722e-6■■■■□ 25.8
FMR1Q06787 CAPN1-214ENST00000528165 2828 ntTSL 216.74■□□□□ 0.272e-6■■■■□ 25.8
FMR1Q06787 DOCK2-217ENST00000540750 1753 ntTSL 5 BASIC10.44□□□□□ -0.742e-6■■■■□ 25.8
FMR1Q06787 CHD4-207ENST00000537634 691 ntTSL 212.48□□□□□ -0.417e-7■■■■□ 25.8
FMR1Q06787 AC074091.1-201ENST00000505973 1741 ntTSL 2 BASIC14.21□□□□□ -0.137e-7■■■■□ 25.8
FMR1Q06787 ZNF512-204ENST00000416005 3515 ntTSL 2 BASIC11.23□□□□□ -0.617e-7■■■■□ 25.8
FMR1Q06787 ZNF512-208ENST00000556601 3543 ntTSL 1 (best) BASIC9.8□□□□□ -0.847e-7■■■■□ 25.8
FMR1Q06787 ZNF512-201ENST00000355467 3541 ntAPPRIS P2 TSL 2 BASIC9.72□□□□□ -0.857e-7■■■■□ 25.8
FMR1Q06787 ZNF512-203ENST00000413371 3703 ntTSL 2 BASIC9.43□□□□□ -0.97e-7■■■■□ 25.8
FMR1Q06787 MCM4-202ENST00000517709 842 ntTSL 215.12■□□□□ 0.016e-7■■■■□ 25.8
FMR1Q06787 MCM4-208ENST00000519470 498 ntTSL 215.31■□□□□ 0.048e-8■■■■□ 25.7
FMR1Q06787 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC32.1■■■□□ 2.733e-7■■■■□ 25.7
FMR1Q06787 SUGP2-205ENST00000594445 732 ntTSL 331.97■■■□□ 2.713e-7■■■■□ 25.7
FMR1Q06787 PIGX-203ENST00000415832 1677 ntTSL 226.34■■□□□ 1.813e-7■■■■□ 25.7
FMR1Q06787 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.312e-13■■■■□ 25.7
FMR1Q06787 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.243e-7■■■■□ 25.7
FMR1Q06787 AC004967.1-201ENST00000453589 447 ntBASIC21.95■■□□□ 1.13e-7■■■■□ 25.7
FMR1Q06787 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.943e-7■■■■□ 25.7
FMR1Q06787 MUM1-202ENST00000585399 425 ntTSL 220.38■□□□□ 0.853e-7■■■■□ 25.7
FMR1Q06787 ZNF251-202ENST00000524394 315 ntTSL 520.35■□□□□ 0.853e-7■■■■□ 25.7
FMR1Q06787 ETNK1-203ENST00000538218 1659 ntTSL 1 (best)20.3■□□□□ 0.843e-7■■■■□ 25.7
FMR1Q06787 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC20.1■□□□□ 0.813e-7■■■■□ 25.7
FMR1Q06787 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.753e-7■■■■□ 25.7
FMR1Q06787 PFKP-207ENST00000421751 658 ntTSL 419.68■□□□□ 0.743e-7■■■■□ 25.7
FMR1Q06787 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.713e-7■■■■□ 25.7
FMR1Q06787 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.713e-7■■■■□ 25.7
FMR1Q06787 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.44■□□□□ 0.73e-7■■■■□ 25.7
FMR1Q06787 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.23■□□□□ 0.673e-7■■■■□ 25.7
FMR1Q06787 PFKP-210ENST00000468050 425 ntTSL 319.21■□□□□ 0.673e-7■■■■□ 25.7
FMR1Q06787 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC18.99■□□□□ 0.633e-7■■■■□ 25.7
FMR1Q06787 SOGA1-203ENST00000463491 802 ntTSL 218.41■□□□□ 0.543e-7■■■■□ 25.7
FMR1Q06787 TNPO2-204ENST00000585886 2362 ntTSL 1 (best)18.26■□□□□ 0.513e-7■■■■□ 25.7
FMR1Q06787 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.473e-7■■■■□ 25.7
FMR1Q06787 PFKP-204ENST00000407806 705 ntTSL 517.72■□□□□ 0.433e-7■■■■□ 25.7
FMR1Q06787 WDR3-203ENST00000471680 732 ntTSL 517.7■□□□□ 0.423e-7■■■■□ 25.7
FMR1Q06787 SLC38A6-210ENST00000527591 1689 ntTSL 1 (best)17.41■□□□□ 0.383e-7■■■■□ 25.7
FMR1Q06787 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.373e-7■■■■□ 25.7
FMR1Q06787 PFKP-206ENST00000415005 1140 ntTSL 217.27■□□□□ 0.363e-7■■■■□ 25.7
FMR1Q06787 MLLT10-207ENST00000430455 184 ntTSL 1 (best)17.15■□□□□ 0.343e-7■■■■□ 25.7
FMR1Q06787 PLCG1-221ENST00000619272 330 ntTSL 317.11■□□□□ 0.333e-7■■■■□ 25.7
FMR1Q06787 PLCG1-209ENST00000483175 1084 ntTSL 217.11■□□□□ 0.333e-7■■■■□ 25.7
FMR1Q06787 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.313e-7■■■■□ 25.7
FMR1Q06787 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.293e-7■■■■□ 25.7
FMR1Q06787 PIGX-207ENST00000453218 1068 ntTSL 516.86■□□□□ 0.293e-7■■■■□ 25.7
FMR1Q06787 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.283e-7■■■■□ 25.7
Retrieved 100 of 13,491 protein–RNA pairs in 78 ms