RNA–Protein interactions for RNA: ENST00000348386.7

CAST-205, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 2,272 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-205ENST00000348386 NISCHQ9Y2I1 1504 aa17.83■□□□□ 0.45
CAST-205ENST00000348386 CHIC1Q5VXU3 224 aa16.81■□□□□ 0.28
CAST-205ENST00000348386 AEBP2Q6ZN18 517 aaPredicted RBP16.31■□□□□ 0.2
CAST-205ENST00000348386 CCDC180Q9P1Z9 1646 aa15.58■□□□□ 0.08
CAST-205ENST00000348386 PHF23Q9BUL5 403 aaPredicted RBP15.23■□□□□ 0.03
CAST-205ENST00000348386 ABCC9O60706 1549 aa15.17■□□□□ 0.02
CAST-205ENST00000348386 DCAF8L2P0C7V8 631 aa15.04■□□□□ -0
CAST-205ENST00000348386 ZCCHC6Q5VYS8 1495 aaKnown RBP14.91□□□□□ -0.02
CAST-205ENST00000348386 EHMT2Q96KQ7 1210 aa14.83□□□□□ -0.04
CAST-205ENST00000348386 DCAF1Q9Y4B6 1507 aa14.68□□□□□ -0.06
CAST-205ENST00000348386 NACADO15069 1562 aa14.63□□□□□ -0.07
CAST-205ENST00000348386 RB1CC1Q8TDY2 1594 aa14.6□□□□□ -0.07
CAST-205ENST00000348386 MYO15BQ96JP2 1530 aa14.59□□□□□ -0.07
CAST-205ENST00000348386 SHROOM4Q9ULL8 1493 aa14.52□□□□□ -0.08
CAST-205ENST00000348386 SLC24A1O60721 1099 aa14.49□□□□□ -0.09
CAST-205ENST00000348386 SCRIBQ14160 1630 aa14.41□□□□□ -0.1
CAST-205ENST00000348386 PABPN1Q86U42 306 aaKnown RBP eCLIP14.31□□□□□ -0.12
CAST-205ENST00000348386 UNC13AQ9UPW8 1703 aa14.2□□□□□ -0.14
CAST-205ENST00000348386 BICRAQ9NZM4 1560 aa14.15□□□□□ -0.14
CAST-205ENST00000348386 PLPPR3Q6T4P5 718 aa14.12□□□□□ -0.15
CAST-205ENST00000348386 KCNA4P22459 653 aa14.11□□□□□ -0.15
CAST-205ENST00000348386 CSRNP3Q8WYN3 585 aa13.95□□□□□ -0.18
CAST-205ENST00000348386 CECR2Q9BXF3 1484 aa13.94□□□□□ -0.18
CAST-205ENST00000348386 SUPT5HO00267 1087 aaKnown RBP13.85□□□□□ -0.19
CAST-205ENST00000348386 RTN4Q9NQC3 1192 aaKnown RBP13.8□□□□□ -0.2
CAST-205ENST00000348386 MROH2BQ7Z745 1585 aa13.8□□□□□ -0.2
CAST-205ENST00000348386 BAZ1AQ9NRL2 1556 aaPredicted RBP13.78□□□□□ -0.2
CAST-205ENST00000348386 RSF1Q96T23 1441 aaPredicted RBP13.77□□□□□ -0.21
CAST-205ENST00000348386 EIF4G1Q04637 1599 aaKnown RBP13.77□□□□□ -0.21
CAST-205ENST00000348386 SMARCA4P51532 1647 aa13.74□□□□□ -0.21
CAST-205ENST00000348386 ADRA2BP18089 450 aa13.67□□□□□ -0.22
CAST-205ENST00000348386 DNAJC5BQ9UF47 199 aa13.67□□□□□ -0.22
CAST-205ENST00000348386 WIZO95785 1651 aa13.64□□□□□ -0.23
CAST-205ENST00000348386 CC2D2AQ9P2K1 1620 aa13.64□□□□□ -0.23
CAST-205ENST00000348386 ATAD2BQ9ULI0 1458 aa13.63□□□□□ -0.23
CAST-205ENST00000348386 SMARCA2P51531 1590 aa13.58□□□□□ -0.24
CAST-205ENST00000348386 BAZ1BQ9UIG0 1483 aaKnown RBP13.55□□□□□ -0.24
CAST-205ENST00000348386 PEG3Q9GZU2 1588 aa13.54□□□□□ -0.24
CAST-205ENST00000348386 NCAPD3P42695 1498 aa13.54□□□□□ -0.24
CAST-205ENST00000348386 TOP2AP11388 1531 aaKnown RBP13.48□□□□□ -0.25
CAST-205ENST00000348386 HMGXB3Q12766 1538 aa13.46□□□□□ -0.26
CAST-205ENST00000348386 SLC4A1APQ9BWU0 796 aaKnown RBP13.43□□□□□ -0.26
CAST-205ENST00000348386 CCDC88BA6NC98 1476 aa13.39□□□□□ -0.27
CAST-205ENST00000348386 AMER1Q5JTC6 1135 aaPredicted RBP13.32□□□□□ -0.28
CAST-205ENST00000348386 SENP3Q9H4L4 574 aaPredicted RBP13.29□□□□□ -0.28
CAST-205ENST00000348386 CADPSQ9ULU8 1353 aa13.22□□□□□ -0.29
CAST-205ENST00000348386 NESP48681 1621 aa13.21□□□□□ -0.29
CAST-205ENST00000348386 CFTRP13569 1480 aa13.17□□□□□ -0.3
CAST-205ENST00000348386 ZBTB22O15209 634 aa13.15□□□□□ -0.3
CAST-205ENST00000348386 PPP6R1Q9UPN7 881 aa13.11□□□□□ -0.31
CAST-205ENST00000348386 LAMC3Q9Y6N6 1575 aa13.1□□□□□ -0.31
CAST-205ENST00000348386 PDS5BQ9NTI5 1447 aa13.07□□□□□ -0.32
CAST-205ENST00000348386 FANCD2Q9BXW9 1451 aa13.07□□□□□ -0.32
CAST-205ENST00000348386 ERCC6Q03468 1493 aa13.03□□□□□ -0.32
CAST-205ENST00000348386 ABCC8Q09428 1581 aa13.03□□□□□ -0.32
CAST-205ENST00000348386 TRIM41Q8WV44 630 aa13.01□□□□□ -0.33
CAST-205ENST00000348386 CEP164Q9UPV0 1460 aa13□□□□□ -0.33
CAST-205ENST00000348386 WRNQ14191 1432 aaPredicted RBP eCLIP12.98□□□□□ -0.33
CAST-205ENST00000348386 KIF21AQ7Z4S6 1674 aa12.95□□□□□ -0.34
CAST-205ENST00000348386 PRDM2Q13029 1718 aa12.94□□□□□ -0.34
CAST-205ENST00000348386 PRKCSHP14314 528 aaPredicted RBP12.93□□□□□ -0.34
CAST-205ENST00000348386 CUX1P39880 1505 aa12.9□□□□□ -0.34
CAST-205ENST00000348386 URB2Q14146 1524 aaKnown RBP12.9□□□□□ -0.34
CAST-205ENST00000348386 NCBP3Q53F19 620 aaKnown RBP12.9□□□□□ -0.34
CAST-205ENST00000348386 MRC2Q9UBG0 1479 aa12.9□□□□□ -0.34
CAST-205ENST00000348386 SYNJ1O43426 1573 aa12.89□□□□□ -0.35
CAST-205ENST00000348386 TOPBP1Q92547 1522 aa12.88□□□□□ -0.35
CAST-205ENST00000348386 DNMBPQ6XZF7 1577 aa12.85□□□□□ -0.35
CAST-205ENST00000348386 TOP2BQ02880 1626 aa12.84□□□□□ -0.35
CAST-205ENST00000348386 FAM9AQ8IZU1 332 aaPredicted RBP12.83□□□□□ -0.36
CAST-205ENST00000348386 FGD5Q6ZNL6 1462 aa12.83□□□□□ -0.36
CAST-205ENST00000348386 THOC2Q8NI27 1593 aaKnown RBP12.81□□□□□ -0.36
CAST-205ENST00000348386 WDR62O43379 1518 aa12.8□□□□□ -0.36
CAST-205ENST00000348386 POLA1P09884 1462 aaPredicted RBP12.8□□□□□ -0.36
CAST-205ENST00000348386 RAD54L2Q9Y4B4 1467 aa12.8□□□□□ -0.36
CAST-205ENST00000348386 SOGA1O94964 1423 aa12.79□□□□□ -0.36
CAST-205ENST00000348386 BIVM-ERCC5R4GMW8 1640 aa12.79□□□□□ -0.36
CAST-205ENST00000348386 CUX2O14529 1486 aa12.75□□□□□ -0.37
CAST-205ENST00000348386 TDRD9Q8NDG6 1382 aaKnown RBP12.73□□□□□ -0.37
CAST-205ENST00000348386 NPM3O75607 178 aaKnown RBP12.73□□□□□ -0.37
CAST-205ENST00000348386 PPP4R3CPQ6ZMV5 832 aa12.72□□□□□ -0.37
CAST-205ENST00000348386 RUSC2Q8N2Y8 1516 aa12.72□□□□□ -0.37
CAST-205ENST00000348386 IFT140Q96RY7 1462 aa12.7□□□□□ -0.38
CAST-205ENST00000348386 ZNF608Q9ULD9 1512 aaPredicted RBP12.68□□□□□ -0.38
CAST-205ENST00000348386 AQRO60306 1485 aaKnown RBP eCLIP12.68□□□□□ -0.382e-6■■■■□ 25.5
CAST-205ENST00000348386 ABCA10Q8WWZ4 1543 aa12.67□□□□□ -0.38
CAST-205ENST00000348386 KIF27Q86VH2 1401 aa12.67□□□□□ -0.38
CAST-205ENST00000348386 TARBP1Q13395 1621 aaKnown RBP12.66□□□□□ -0.38
CAST-205ENST00000348386 GAPVD1Q14C86 1478 aa12.62□□□□□ -0.39
CAST-205ENST00000348386 IGF1RP08069 1367 aa12.61□□□□□ -0.39
CAST-205ENST00000348386 LOC105371045A0A1W2PR82 267 aa12.6□□□□□ -0.39
CAST-205ENST00000348386 EEA1Q15075 1411 aa12.6□□□□□ -0.39
CAST-205ENST00000348386 WDR97A6NE52 1622 aa12.58□□□□□ -0.4
CAST-205ENST00000348386 FBLN2P98095 1184 aa12.57□□□□□ -0.4
CAST-205ENST00000348386 EIF4G3O43432 1585 aaKnown RBP12.56□□□□□ -0.4
CAST-205ENST00000348386 GRIN2BQ13224 1484 aa12.56□□□□□ -0.4
CAST-205ENST00000348386 ABCA5Q8WWZ7 1642 aa12.55□□□□□ -0.4
CAST-205ENST00000348386 CARMIL1Q5VZK9 1371 aa12.55□□□□□ -0.4
CAST-205ENST00000348386 SNAPC4Q5SXM2 1469 aa12.52□□□□□ -0.4
CAST-205ENST00000348386 UBTFP17480 764 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 690.6 ms