RNA–Protein interactions for RNA: ENST00000258149.9

MDM2-202, Transcript of MDM2 proto-oncogene, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene MDM2, Length 12,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-202ENST00000258149 DCAF8L2P0C7V8 631 aa14.58□□□□□ -0.08
MDM2-202ENST00000258149 SUPT5HO00267 1087 aaKnown RBP14.14□□□□□ -0.15
MDM2-202ENST00000258149 SHROOM4Q9ULL8 1493 aa14.01□□□□□ -0.17
MDM2-202ENST00000258149 NISCHQ9Y2I1 1504 aa13.99□□□□□ -0.17
MDM2-202ENST00000258149 EHMT2Q96KQ7 1210 aa13.98□□□□□ -0.17
MDM2-202ENST00000258149 TTBK1Q5TCY1 1321 aaPredicted RBP13.51□□□□□ -0.25
MDM2-202ENST00000258149 PCGF6Q9BYE7 350 aa13.49□□□□□ -0.25
MDM2-202ENST00000258149 FAM9AQ8IZU1 332 aaPredicted RBP13.39□□□□□ -0.27
MDM2-202ENST00000258149 PELP1Q8IZL8 1130 aaKnown RBP13.26□□□□□ -0.29
MDM2-202ENST00000258149 RANGAP1P46060 587 aaPredicted RBP13.15□□□□□ -0.3
MDM2-202ENST00000258149 APLP2Q06481 763 aa13.11□□□□□ -0.31
MDM2-202ENST00000258149 YTHDC1Q96MU7 727 aaKnown RBP13.09□□□□□ -0.31
MDM2-202ENST00000258149 CCER1Q8TC90 406 aaPredicted RBP13.07□□□□□ -0.32
MDM2-202ENST00000258149 PPARGC1BQ86YN6 1023 aaKnown RBP13.06□□□□□ -0.32
MDM2-202ENST00000258149 CENPBP07199 599 aaPredicted RBP12.99□□□□□ -0.33
MDM2-202ENST00000258149 ERICH6Q7L0X2 663 aa12.95□□□□□ -0.34
MDM2-202ENST00000258149 TRIM41Q8WV44 630 aa12.92□□□□□ -0.34
MDM2-202ENST00000258149 ZEB1P37275 1124 aaPredicted RBP12.87□□□□□ -0.35
MDM2-202ENST00000258149 ATP1B4Q9UN42 357 aaPredicted RBP12.85□□□□□ -0.35
MDM2-202ENST00000258149 UBTFP17480 764 aaKnown RBP12.77□□□□□ -0.37
MDM2-202ENST00000258149 HRCP23327 699 aa12.76□□□□□ -0.37
MDM2-202ENST00000258149 LOC105371045A0A1W2PR82 267 aa12.74□□□□□ -0.37
MDM2-202ENST00000258149 TRIM26Q12899 539 aaPredicted RBP12.69□□□□□ -0.38
MDM2-202ENST00000258149 NEFLP07196 543 aa12.65□□□□□ -0.38
MDM2-202ENST00000258149 MYT1Q01538 1121 aa12.62□□□□□ -0.39
MDM2-202ENST00000258149 ITGAEP38570 1179 aa12.57□□□□□ -0.4
MDM2-202ENST00000258149 CNGB1Q14028 1251 aaPredicted RBP12.55□□□□□ -0.4
MDM2-202ENST00000258149 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.51□□□□□ -0.41
MDM2-202ENST00000258149 HNRNPUL2Q1KMD3 747 aaKnown RBP12.51□□□□□ -0.41
MDM2-202ENST00000258149 CHIC1Q5VXU3 224 aa12.48□□□□□ -0.41
MDM2-202ENST00000258149 POLR3GLQ9BT43 218 aa12.47□□□□□ -0.41
MDM2-202ENST00000258149 DIEXFQ68CQ4 756 aaKnown RBP12.41□□□□□ -0.42
MDM2-202ENST00000258149 GTF3C3Q9Y5Q9 886 aa12.33□□□□□ -0.44
MDM2-202ENST00000258149 BCANQ96GW7 911 aa12.32□□□□□ -0.44
MDM2-202ENST00000258149 ABCC9O60706 1549 aa12.27□□□□□ -0.44
MDM2-202ENST00000258149 DAXXQ9UER7 740 aaPredicted RBP12.27□□□□□ -0.45
MDM2-202ENST00000258149 NEUROD1Q13562 356 aa12.17□□□□□ -0.46
MDM2-202ENST00000258149 FAM50AQ14320 339 aaKnown RBP12.14□□□□□ -0.47
MDM2-202ENST00000258149 MYT1LQ9UL68 1186 aa12.13□□□□□ -0.47
MDM2-202ENST00000258149 SLC4A1APQ9BWU0 796 aaKnown RBP12.1□□□□□ -0.47
MDM2-202ENST00000258149 ZNF316A6NFI3 1004 aaPredicted RBP12.06□□□□□ -0.48
MDM2-202ENST00000258149 RTL5Q5HYW3 569 aaPredicted RBP12.06□□□□□ -0.48
MDM2-202ENST00000258149 PABPN1Q86U42 306 aaKnown RBP eCLIP12.05□□□□□ -0.48
MDM2-202ENST00000258149 CLSPNQ9HAW4 1339 aa12.04□□□□□ -0.48
MDM2-202ENST00000258149 ACIN1Q9UKV3 1341 aaKnown RBP12.04□□□□□ -0.48
MDM2-202ENST00000258149 TRIM52Q96A61 297 aa12□□□□□ -0.49
MDM2-202ENST00000258149 ZNF326Q5BKZ1 582 aaKnown RBP11.98□□□□□ -0.49
MDM2-202ENST00000258149 BCL11AQ9H165 835 aa11.95□□□□□ -0.5
MDM2-202ENST00000258149 CDK11AQ9UQ88 783 aaPredicted RBP11.94□□□□□ -0.5
MDM2-202ENST00000258149 ANP32CO43423 234 aa11.92□□□□□ -0.5
MDM2-202ENST00000258149 SCAF1Q9H7N4 1312 aaKnown RBP11.91□□□□□ -0.5
MDM2-202ENST00000258149 NPM2Q86SE8 214 aaKnown RBP11.87□□□□□ -0.51
MDM2-202ENST00000258149 ARID3CA6NKF2 412 aa11.86□□□□□ -0.51
MDM2-202ENST00000258149 FKBP8Q14318 412 aa11.86□□□□□ -0.51
MDM2-202ENST00000258149 MYO15BQ96JP2 1530 aa11.85□□□□□ -0.51
MDM2-202ENST00000258149 P3H3Q8IVL6 736 aa11.85□□□□□ -0.51
MDM2-202ENST00000258149 SCRIBQ14160 1630 aa11.81□□□□□ -0.52
MDM2-202ENST00000258149 CCDC180Q9P1Z9 1646 aa11.77□□□□□ -0.53
MDM2-202ENST00000258149 NBR1Q14596 966 aa11.76□□□□□ -0.53
MDM2-202ENST00000258149 FBLN2P98095 1184 aa11.74□□□□□ -0.53
MDM2-202ENST00000258149 DCAF1Q9Y4B6 1507 aa11.74□□□□□ -0.53
MDM2-202ENST00000258149 IRX6P78412 446 aaPredicted RBP11.74□□□□□ -0.53
MDM2-202ENST00000258149 CANXP27824 592 aaKnown RBP11.73□□□□□ -0.53
MDM2-202ENST00000258149 ANP32AP39687 249 aaKnown RBP11.73□□□□□ -0.53
MDM2-202ENST00000258149 DDX10Q13206 875 aaKnown RBP11.72□□□□□ -0.53
MDM2-202ENST00000258149 EIF5BO60841 1220 aaKnown RBP11.71□□□□□ -0.53
MDM2-202ENST00000258149 SALL2Q9Y467 1007 aaPredicted RBP11.71□□□□□ -0.53
MDM2-202ENST00000258149 HIRIP3Q9BW71 556 aaPredicted RBP11.7□□□□□ -0.54
MDM2-202ENST00000258149 MIER1Q8N108 512 aa11.69□□□□□ -0.54
MDM2-202ENST00000258149 FAM9BQ8IZU0 186 aa11.69□□□□□ -0.54
MDM2-202ENST00000258149 SLC24A1O60721 1099 aa11.69□□□□□ -0.54
MDM2-202ENST00000258149 HNRNPUQ00839 825 aaKnown RBP eCLIP11.68□□□□□ -0.54
MDM2-202ENST00000258149 ARXQ96QS3 562 aa11.67□□□□□ -0.54
MDM2-202ENST00000258149 SENP3-EIF4A1A0A087X0R7 540 aa11.63□□□□□ -0.55
MDM2-202ENST00000258149 ZNF777Q9ULD5 760 aaPredicted RBP11.62□□□□□ -0.55
MDM2-202ENST00000258149 CSRNP3Q8WYN3 585 aa11.61□□□□□ -0.55
MDM2-202ENST00000258149 ZBTB47Q9UFB7 747 aaPredicted RBP11.6□□□□□ -0.55
MDM2-202ENST00000258149 TONSLQ96HA7 1378 aa11.58□□□□□ -0.56
MDM2-202ENST00000258149 ZCCHC6Q5VYS8 1495 aaKnown RBP11.57□□□□□ -0.56
MDM2-202ENST00000258149 RB1CC1Q8TDY2 1594 aa11.57□□□□□ -0.56
MDM2-202ENST00000258149 CHIC2Q9UKJ5 165 aa11.54□□□□□ -0.56
MDM2-202ENST00000258149 CCDC136Q96JN2 1154 aa11.5□□□□□ -0.57
MDM2-202ENST00000258149 SENP3Q9H4L4 574 aaPredicted RBP11.47□□□□□ -0.57
MDM2-202ENST00000258149 HSP90AA1P07900 732 aaKnown RBP11.46□□□□□ -0.57
MDM2-202ENST00000258149 KDM2AQ9Y2K7 1162 aa11.45□□□□□ -0.58
MDM2-202ENST00000258149 TMC1Q8TDI8 760 aa11.44□□□□□ -0.58
MDM2-202ENST00000258149 MRS2Q9HD23 443 aa11.44□□□□□ -0.58
MDM2-202ENST00000258149 RTN4Q9NQC3 1192 aaKnown RBP11.43□□□□□ -0.58
MDM2-202ENST00000258149 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.41□□□□□ -0.581e-8■■□□□ 11.5
MDM2-202ENST00000258149 CHGAP10645 457 aaKnown RBP11.41□□□□□ -0.58
MDM2-202ENST00000258149 SUPT16HQ9Y5B9 1047 aaKnown RBP11.4□□□□□ -0.59
MDM2-202ENST00000258149 PLPPR3Q6T4P5 718 aa11.39□□□□□ -0.59
MDM2-202ENST00000258149 NEFMP07197 916 aa11.39□□□□□ -0.59
MDM2-202ENST00000258149 UPF2Q9HAU5 1272 aaKnown RBP11.38□□□□□ -0.59
MDM2-202ENST00000258149 ANP32EQ9BTT0 268 aa11.38□□□□□ -0.59
MDM2-202ENST00000258149 CEP162Q5TB80 1403 aa11.37□□□□□ -0.59
MDM2-202ENST00000258149 NACADO15069 1562 aa11.37□□□□□ -0.59
MDM2-202ENST00000258149 ANP32BQ92688 251 aaKnown RBP11.37□□□□□ -0.59
MDM2-202ENST00000258149 CLIP1P30622 1438 aa11.37□□□□□ -0.59
MDM2-202ENST00000258149 RRP7BPQ9NSQ0 103 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms