RNA–Protein interactions for RNA: ENST00000484552.5

CAST-210, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-210ENST00000484552 AEBP2Q6ZN18 517 aaPredicted RBP18.4■□□□□ 0.54
CAST-210ENST00000484552 CHIC1Q5VXU3 224 aa17.37■□□□□ 0.37
CAST-210ENST00000484552 SLC24A1O60721 1099 aa16.27■□□□□ 0.2
CAST-210ENST00000484552 SENP3Q9H4L4 574 aaPredicted RBP15.97■□□□□ 0.15
CAST-210ENST00000484552 PHF23Q9BUL5 403 aaPredicted RBP15.59■□□□□ 0.09
CAST-210ENST00000484552 MYT1Q01538 1121 aa15.36■□□□□ 0.05
CAST-210ENST00000484552 TTBK1Q5TCY1 1321 aaPredicted RBP15.27■□□□□ 0.03
CAST-210ENST00000484552 PELP1Q8IZL8 1130 aaKnown RBP15.08■□□□□ 0.01
CAST-210ENST00000484552 DAXXQ9UER7 740 aaPredicted RBP15.08■□□□□ 0.01
CAST-210ENST00000484552 POTEDQ86YR6 584 aa14.9□□□□□ -0.02
CAST-210ENST00000484552 FOXD1Q16676 465 aa14.85□□□□□ -0.03
CAST-210ENST00000484552 APLP2Q06481 763 aa14.74□□□□□ -0.05
CAST-210ENST00000484552 ERICH6Q7L0X2 663 aa14.69□□□□□ -0.06
CAST-210ENST00000484552 PRKCSHP14314 528 aaPredicted RBP14.6□□□□□ -0.07
CAST-210ENST00000484552 NCBP3Q53F19 620 aaKnown RBP14.55□□□□□ -0.08
CAST-210ENST00000484552 EHMT2Q96KQ7 1210 aa14.44□□□□□ -0.1
CAST-210ENST00000484552 NISCHQ9Y2I1 1504 aa14.28□□□□□ -0.12
CAST-210ENST00000484552 MSH5O43196 834 aa14.27□□□□□ -0.12
CAST-210ENST00000484552 RTN4Q9NQC3 1192 aaKnown RBP14.27□□□□□ -0.13
CAST-210ENST00000484552 PLPPR3Q6T4P5 718 aa14.23□□□□□ -0.13
CAST-210ENST00000484552 ARXQ96QS3 562 aa14.13□□□□□ -0.15
CAST-210ENST00000484552 AMER1Q5JTC6 1135 aaPredicted RBP14.06□□□□□ -0.16
CAST-210ENST00000484552 RANGAP1P46060 587 aaPredicted RBP13.85□□□□□ -0.19
CAST-210ENST00000484552 EIF5BO60841 1220 aaKnown RBP13.78□□□□□ -0.2
CAST-210ENST00000484552 PIAS4Q8N2W9 510 aaPredicted RBP13.78□□□□□ -0.2
CAST-210ENST00000484552 TIMELESSQ9UNS1 1208 aa13.72□□□□□ -0.21
CAST-210ENST00000484552 HOMEZQ8IX15 550 aa13.61□□□□□ -0.23
CAST-210ENST00000484552 KCNA4P22459 653 aa13.58□□□□□ -0.24
CAST-210ENST00000484552 TULP1O00294 542 aaPredicted RBP13.5□□□□□ -0.25
CAST-210ENST00000484552 KLHL34Q8N239 644 aa13.43□□□□□ -0.26
CAST-210ENST00000484552 TAOK2Q9UL54 1235 aa13.43□□□□□ -0.26
CAST-210ENST00000484552 CSRNP3Q8WYN3 585 aa13.4□□□□□ -0.26
CAST-210ENST00000484552 PPP6R1Q9UPN7 881 aa13.33□□□□□ -0.28
CAST-210ENST00000484552 BCL11AQ9H165 835 aa13.31□□□□□ -0.28
CAST-210ENST00000484552 ADRA2BP18089 450 aa13.29□□□□□ -0.28
CAST-210ENST00000484552 PODXL2Q9NZ53 605 aa13.29□□□□□ -0.28
CAST-210ENST00000484552 BCANQ96GW7 911 aa13.27□□□□□ -0.28
CAST-210ENST00000484552 TPRNQ4KMQ1 711 aa13.15□□□□□ -0.3
CAST-210ENST00000484552 PLEKHG5O94827 1062 aa13.15□□□□□ -0.31
CAST-210ENST00000484552 GTF3C3Q9Y5Q9 886 aa13.09□□□□□ -0.31
CAST-210ENST00000484552 NPM2Q86SE8 214 aaKnown RBP13.07□□□□□ -0.32
CAST-210ENST00000484552 FBXO3Q9UK99 471 aa12.99□□□□□ -0.33
CAST-210ENST00000484552 FAM9AQ8IZU1 332 aaPredicted RBP12.97□□□□□ -0.33
CAST-210ENST00000484552 PLCB2Q00722 1185 aa12.88□□□□□ -0.35
CAST-210ENST00000484552 C14orf37Q86TY3 774 aa12.87□□□□□ -0.35
CAST-210ENST00000484552 CCDC180Q9P1Z9 1646 aa12.79□□□□□ -0.36
CAST-210ENST00000484552 PDIA4P13667 645 aaKnown RBP12.78□□□□□ -0.36
CAST-210ENST00000484552 TMEM132AQ24JP5 1023 aa12.78□□□□□ -0.36
CAST-210ENST00000484552 UBE2Q2Q8WVN8 375 aa12.78□□□□□ -0.36
CAST-210ENST00000484552 DCAF8L2P0C7V8 631 aa12.74□□□□□ -0.37
CAST-210ENST00000484552 ABCC9O60706 1549 aa12.74□□□□□ -0.37
CAST-210ENST00000484552 HAP1P54257 671 aaPredicted RBP12.71□□□□□ -0.37
CAST-210ENST00000484552 TRIM26Q12899 539 aaPredicted RBP12.64□□□□□ -0.39
CAST-210ENST00000484552 LOC105371045A0A1W2PR82 267 aa12.63□□□□□ -0.39
CAST-210ENST00000484552 CACNB1Q02641 598 aaPredicted RBP12.6□□□□□ -0.39
CAST-210ENST00000484552 SLC4A1APQ9BWU0 796 aaKnown RBP12.57□□□□□ -0.4
CAST-210ENST00000484552 NEFLP07196 543 aa12.55□□□□□ -0.4
CAST-210ENST00000484552 HRCP23327 699 aa12.53□□□□□ -0.4
CAST-210ENST00000484552 PDE4CQ08493 712 aa12.53□□□□□ -0.4
CAST-210ENST00000484552 VSIG10Q8N0Z9 540 aa12.53□□□□□ -0.4
CAST-210ENST00000484552 DMRT2Q9Y5R5 561 aa12.52□□□□□ -0.41
CAST-210ENST00000484552 CDK11AQ9UQ88 783 aaPredicted RBP12.51□□□□□ -0.41
CAST-210ENST00000484552 CHMP4AQ9BY43 222 aa12.5□□□□□ -0.41
CAST-210ENST00000484552 CNKSR2Q8WXI2 1034 aa12.47□□□□□ -0.41
CAST-210ENST00000484552 BRD2P25440 801 aaKnown RBP12.46□□□□□ -0.41
CAST-210ENST00000484552 TAF7LQ5H9L4 462 aa12.46□□□□□ -0.41
CAST-210ENST00000484552 PKNOX2Q96KN3 472 aa12.46□□□□□ -0.42
CAST-210ENST00000484552 CDK11BP21127 795 aaKnown RBP12.43□□□□□ -0.42
CAST-210ENST00000484552 SAMD1Q6SPF0 538 aaPredicted RBP12.41□□□□□ -0.42
CAST-210ENST00000484552 SUPT5HO00267 1087 aaKnown RBP12.4□□□□□ -0.42
CAST-210ENST00000484552 CENPBP07199 599 aaPredicted RBP12.39□□□□□ -0.43
CAST-210ENST00000484552 MAPK8IP2Q13387 824 aaPredicted RBP12.37□□□□□ -0.43
CAST-210ENST00000484552 UBTFP17480 764 aaKnown RBP12.36□□□□□ -0.43
CAST-210ENST00000484552 SHROOM4Q9ULL8 1493 aa12.35□□□□□ -0.43
CAST-210ENST00000484552 SCAF1Q9H7N4 1312 aaKnown RBP12.34□□□□□ -0.43
CAST-210ENST00000484552 HMGB1P09429 215 aaKnown RBP12.34□□□□□ -0.43
CAST-210ENST00000484552 HSP90B1P14625 803 aaKnown RBP12.28□□□□□ -0.44
CAST-210ENST00000484552 DHX37Q8IY37 1157 aaKnown RBP12.25□□□□□ -0.45
CAST-210ENST00000484552 KDM2AQ9Y2K7 1162 aa12.23□□□□□ -0.45
CAST-210ENST00000484552 FGD1P98174 961 aa12.2□□□□□ -0.46
CAST-210ENST00000484552 BCL11BQ9C0K0 894 aaPredicted RBP12.16□□□□□ -0.46
CAST-210ENST00000484552 RB1CC1Q8TDY2 1594 aa12.16□□□□□ -0.46
CAST-210ENST00000484552 IGSF3O75054 1194 aa12.11□□□□□ -0.47
CAST-210ENST00000484552 ZNF326Q5BKZ1 582 aaKnown RBP12.1□□□□□ -0.47
CAST-210ENST00000484552 BCCIPQ9P287 314 aaKnown RBP eCLIP12.1□□□□□ -0.47
CAST-210ENST00000484552 NACADO15069 1562 aa12.1□□□□□ -0.47
CAST-210ENST00000484552 RSPH4AQ5TD94 716 aa12.07□□□□□ -0.48
CAST-210ENST00000484552 CCDC9Q9Y3X0 531 aaKnown RBP12.07□□□□□ -0.48
CAST-210ENST00000484552 PUS7Q96PZ0 661 aaKnown RBP12.07□□□□□ -0.48
CAST-210ENST00000484552 DCAF8L1A6NGE4 600 aa12.05□□□□□ -0.48
CAST-210ENST00000484552 FBLN2P98095 1184 aa12.05□□□□□ -0.48
CAST-210ENST00000484552 RNF39Q9H2S5 420 aa12.04□□□□□ -0.48
CAST-210ENST00000484552 ANO8Q9HCE9 1232 aaPredicted RBP12.02□□□□□ -0.49
CAST-210ENST00000484552 ANP32EQ9BTT0 268 aa12.01□□□□□ -0.49
CAST-210ENST00000484552 ZBTB22O15209 634 aa12□□□□□ -0.49
CAST-210ENST00000484552 MYO15BQ96JP2 1530 aa11.99□□□□□ -0.49
CAST-210ENST00000484552 FKBP8Q14318 412 aa11.96□□□□□ -0.49
CAST-210ENST00000484552 POLR3GLQ9BT43 218 aa11.95□□□□□ -0.5
CAST-210ENST00000484552 RSPH6AQ9H0K4 717 aa11.92□□□□□ -0.5
CAST-210ENST00000484552 DNAJC5BQ9UF47 199 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms