RNA–Protein interactions for RNA: ENST00000510756.5

CAST-233, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-233ENST00000510756 NISCHQ9Y2I1 1504 aa28.18■■■□□ 2.1
CAST-233ENST00000510756 CCDC180Q9P1Z9 1646 aa24.81■■□□□ 1.56
CAST-233ENST00000510756 ZCCHC6Q5VYS8 1495 aaKnown RBP23.68■■□□□ 1.38
CAST-233ENST00000510756 DCAF1Q9Y4B6 1507 aa23.53■■□□□ 1.36
CAST-233ENST00000510756 MYO15BQ96JP2 1530 aa23.34■■□□□ 1.33
CAST-233ENST00000510756 ABCC9O60706 1549 aa23.12■■□□□ 1.29
CAST-233ENST00000510756 NACADO15069 1562 aa23.08■■□□□ 1.28
CAST-233ENST00000510756 RB1CC1Q8TDY2 1594 aa22.84■■□□□ 1.25
CAST-233ENST00000510756 DCAF8L2P0C7V8 631 aa22.83■■□□□ 1.25
CAST-233ENST00000510756 SHROOM4Q9ULL8 1493 aa22.47■■□□□ 1.19
CAST-233ENST00000510756 SCRIBQ14160 1630 aa22.46■■□□□ 1.19
CAST-233ENST00000510756 UNC13AQ9UPW8 1703 aa22.29■■□□□ 1.16
CAST-233ENST00000510756 BICRAQ9NZM4 1560 aa22.07■■□□□ 1.12
CAST-233ENST00000510756 BAZ1AQ9NRL2 1556 aaPredicted RBP21.81■■□□□ 1.08
CAST-233ENST00000510756 RSF1Q96T23 1441 aaPredicted RBP21.75■■□□□ 1.07
CAST-233ENST00000510756 CECR2Q9BXF3 1484 aa21.72■■□□□ 1.07
CAST-233ENST00000510756 SMARCA4P51532 1647 aa21.68■■□□□ 1.06
CAST-233ENST00000510756 PABPN1Q86U42 306 aaKnown RBP eCLIP21.67■■□□□ 1.06
CAST-233ENST00000510756 MROH2BQ7Z745 1585 aa21.65■■□□□ 1.06
CAST-233ENST00000510756 SUPT5HO00267 1087 aaKnown RBP21.6■■□□□ 1.05
CAST-233ENST00000510756 PEG3Q9GZU2 1588 aa21.57■■□□□ 1.04
CAST-233ENST00000510756 WIZO95785 1651 aa21.45■■□□□ 1.02
CAST-233ENST00000510756 SMARCA2P51531 1590 aa21.41■■□□□ 1.02
CAST-233ENST00000510756 EIF4G1Q04637 1599 aaKnown RBP21.4■■□□□ 1.02
CAST-233ENST00000510756 TOP2AP11388 1531 aaKnown RBP21.39■■□□□ 1.01
CAST-233ENST00000510756 ATAD2BQ9ULI0 1458 aa21.32■■□□□ 1
CAST-233ENST00000510756 HMGXB3Q12766 1538 aa21.26■□□□□ 0.99
CAST-233ENST00000510756 NCAPD3P42695 1498 aa21.24■□□□□ 0.99
CAST-233ENST00000510756 BAZ1BQ9UIG0 1483 aaKnown RBP21.17■□□□□ 0.98
CAST-233ENST00000510756 CC2D2AQ9P2K1 1620 aa21.07■□□□□ 0.96
CAST-233ENST00000510756 CCDC88BA6NC98 1476 aa21.04■□□□□ 0.96
CAST-233ENST00000510756 CHIC1Q5VXU3 224 aa20.81■□□□□ 0.92
CAST-233ENST00000510756 PRDM2Q13029 1718 aa20.72■□□□□ 0.91
CAST-233ENST00000510756 CFTRP13569 1480 aa20.71■□□□□ 0.91
CAST-233ENST00000510756 CADPSQ9ULU8 1353 aa20.61■□□□□ 0.89
CAST-233ENST00000510756 LAMC3Q9Y6N6 1575 aa20.56■□□□□ 0.88
CAST-233ENST00000510756 TRIM41Q8WV44 630 aa20.49■□□□□ 0.87
CAST-233ENST00000510756 WRNQ14191 1432 aaPredicted RBP eCLIP20.48■□□□□ 0.87
CAST-233ENST00000510756 ABCC8Q09428 1581 aa20.45■□□□□ 0.86
CAST-233ENST00000510756 BIVM-ERCC5R4GMW8 1640 aa20.43■□□□□ 0.86
CAST-233ENST00000510756 TOP2BQ02880 1626 aa20.42■□□□□ 0.86
CAST-233ENST00000510756 SYNJ1O43426 1573 aa20.36■□□□□ 0.85
CAST-233ENST00000510756 DNAJC5BQ9UF47 199 aa20.36■□□□□ 0.85
CAST-233ENST00000510756 FANCD2Q9BXW9 1451 aa20.34■□□□□ 0.85
CAST-233ENST00000510756 PDS5BQ9NTI5 1447 aa20.34■□□□□ 0.85
CAST-233ENST00000510756 EEA1Q15075 1411 aa20.32■□□□□ 0.84
CAST-233ENST00000510756 CUX1P39880 1505 aa20.28■□□□□ 0.84
CAST-233ENST00000510756 NESP48681 1621 aa20.26■□□□□ 0.83
CAST-233ENST00000510756 CEP164Q9UPV0 1460 aa20.26■□□□□ 0.83
CAST-233ENST00000510756 DNMBPQ6XZF7 1577 aa20.24■□□□□ 0.83
CAST-233ENST00000510756 KIF21AQ7Z4S6 1674 aa20.15■□□□□ 0.82
CAST-233ENST00000510756 TOPBP1Q92547 1522 aa20.13■□□□□ 0.81
CAST-233ENST00000510756 URB2Q14146 1524 aaKnown RBP20.07■□□□□ 0.8
CAST-233ENST00000510756 MRC2Q9UBG0 1479 aa20.07■□□□□ 0.8
CAST-233ENST00000510756 FGD5Q6ZNL6 1462 aa20.06■□□□□ 0.8
CAST-233ENST00000510756 SOGA1O94964 1423 aa20.05■□□□□ 0.8
CAST-233ENST00000510756 KIF27Q86VH2 1401 aa20.01■□□□□ 0.79
CAST-233ENST00000510756 WDR62O43379 1518 aa20.01■□□□□ 0.79
CAST-233ENST00000510756 POLA1P09884 1462 aaPredicted RBP20■□□□□ 0.79
CAST-233ENST00000510756 KIF21BO75037 1637 aa20■□□□□ 0.79
CAST-233ENST00000510756 ABCA10Q8WWZ4 1543 aa20■□□□□ 0.79
CAST-233ENST00000510756 CSRNP3Q8WYN3 585 aa19.98■□□□□ 0.79
CAST-233ENST00000510756 WDR97A6NE52 1622 aa19.97■□□□□ 0.79
CAST-233ENST00000510756 RUSC2Q8N2Y8 1516 aa19.94■□□□□ 0.78
CAST-233ENST00000510756 THOC2Q8NI27 1593 aaKnown RBP19.93■□□□□ 0.78
CAST-233ENST00000510756 ERICH3Q5RHP9 1530 aa19.92■□□□□ 0.78
CAST-233ENST00000510756 ERCC6Q03468 1493 aa19.91■□□□□ 0.78
CAST-233ENST00000510756 GOLGA3Q08378 1498 aa19.9■□□□□ 0.78
CAST-233ENST00000510756 CUX2O14529 1486 aa19.89■□□□□ 0.77
CAST-233ENST00000510756 TARBP1Q13395 1621 aaKnown RBP19.88■□□□□ 0.77
CAST-233ENST00000510756 PRXQ9BXM0 1461 aa19.88■□□□□ 0.77
CAST-233ENST00000510756 FAM9AQ8IZU1 332 aaPredicted RBP19.86■□□□□ 0.77
CAST-233ENST00000510756 ABCA5Q8WWZ7 1642 aa19.84■□□□□ 0.77
CAST-233ENST00000510756 IFT140Q96RY7 1462 aa19.84■□□□□ 0.77
CAST-233ENST00000510756 TNIKQ9UKE5 1360 aa19.83■□□□□ 0.76
CAST-233ENST00000510756 RAD54L2Q9Y4B4 1467 aa19.81■□□□□ 0.76
CAST-233ENST00000510756 LOC105371045A0A1W2PR82 267 aa19.81■□□□□ 0.76
CAST-233ENST00000510756 CUL7Q14999 1698 aa19.81■□□□□ 0.76
CAST-233ENST00000510756 IGF1RP08069 1367 aa19.79■□□□□ 0.76
CAST-233ENST00000510756 GAPVD1Q14C86 1478 aa19.73■□□□□ 0.75
CAST-233ENST00000510756 RAPGEF2Q9Y4G8 1499 aa19.71■□□□□ 0.75
CAST-233ENST00000510756 CARMIL1Q5VZK9 1371 aa19.68■□□□□ 0.74
CAST-233ENST00000510756 PBRM1Q86U86 1689 aa19.67■□□□□ 0.74
CAST-233ENST00000510756 GRIN2BQ13224 1484 aa19.64■□□□□ 0.73
CAST-233ENST00000510756 TDRD9Q8NDG6 1382 aaKnown RBP19.6■□□□□ 0.73
CAST-233ENST00000510756 CEP162Q5TB80 1403 aa19.6■□□□□ 0.73
CAST-233ENST00000510756 UBTFP17480 764 aaKnown RBP19.58■□□□□ 0.73
CAST-233ENST00000510756 EIF4G3O43432 1585 aaKnown RBP19.58■□□□□ 0.73
CAST-233ENST00000510756 ADAMTS12P58397 1594 aa19.57■□□□□ 0.72
CAST-233ENST00000510756 FHAD1B1AJZ9 1412 aa19.57■□□□□ 0.72
CAST-233ENST00000510756 MAGI1Q96QZ7 1491 aaPredicted RBP19.54■□□□□ 0.72
CAST-233ENST00000510756 ZNF608Q9ULD9 1512 aaPredicted RBP19.53■□□□□ 0.72
CAST-233ENST00000510756 AQRO60306 1485 aaKnown RBP eCLIP19.52■□□□□ 0.722e-6■■■■□ 24.4
CAST-233ENST00000510756 CTTNBP2Q8WZ74 1663 aa19.51■□□□□ 0.71
CAST-233ENST00000510756 CLIP1P30622 1438 aa19.49■□□□□ 0.71
CAST-233ENST00000510756 EFCAB5A4FU69 1503 aa19.43■□□□□ 0.7
CAST-233ENST00000510756 SNAPC4Q5SXM2 1469 aa19.42■□□□□ 0.7
CAST-233ENST00000510756 SYNJ2O15056 1496 aa19.41■□□□□ 0.7
CAST-233ENST00000510756 EHMT2Q96KQ7 1210 aa19.39■□□□□ 0.69
CAST-233ENST00000510756 VPS8Q8N3P4 1428 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms